ORF » Species Summary » Populus trichocarpa » LOC7478938 cDNA ORF clone

LOC7478938 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7478938 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7478938 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa28022 XM_002319472.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0013s01660g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa442053 XM_002319472.3
Latest version!		 Populus trichocarpa 3-ketoacyl-CoA synthase 7 (LOC7478938), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7478938 ( XM_002319472.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002319508.2 Populus trichocarpa hypothetical protein (POPTR_0013s01660g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa28022
    Clone ID Related Accession (Same CDS sequence) XM_002319472.2
    Accession Version XM_002319472.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1374bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). On Dec 16, 2013 this sequence version replaced XM_002319472.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGCAAAAG ATCAGAGCTT CATGTTAGAG CAAACCAGGA TTGCTGAAAT CTTAATCCTG 
    GTTGCTGATT TCAGAGTGCT AGCAGCGGTT ACTCTCTCGG TGGCAATTGC TTTGTACCTT 
    TCATTCAATT CCAAGCATGT TTATCTTGTT GACTTCATGT GCTACAAGGC ACCAAACACT 
    CTCCGAGTTC CCCTCTCCTC CTTAATAGAA CATGTAGAAA GATGGGGTAA GTTTGACAGC 
    AAAACAATTG AGTTTCAAAC CAAAATCAGT GAAAGATCGG GTATTGGCAA CGAAACCTAC 
    TTGCCCACGG GAGTCCACCA ATTTCCATGT GATCTTTCCT TGAGTTCTAC CATTGAAGAA 
    GTGGAAATGG TGCTATTCAC AATAGTCCAA GACCTATTCA CCAAGCACAG GATTGATCCG 
    AAAAGCGTTG ACATTATCAT CACAAATTGC AGTCTTGTAT GCCCCACTCC ATCTTTAGCC 
    ACAATGATGA TCAATAAATT TGGATTTAGA AGCAATATAA GGAGCTTCAA TCTTTCTGGG 
    ATGGGCTGCA GTGCTGGCCT CTTGTCAATT TCGCTAGCTC GAGACCTCCT CGGAGCGCAC 
    AACAACTCTT TGGCTCTAGT CCTCAGCATG GAATCGGTGA GTTCCAACAT GTACCATGGA 
    CAAGTCAAGT CTATGCTACT GGCAAACTGC TTGTTTCGAA TGGGAGGTGC TGCGATTTTG 
    CTATCAAATC GCAAAAGTGA CAGACAGATT GCTAAATATG AACTCCAACA TCTGGTTAGG 
    ACTCATCTTG GATCTAAGGA TAATTCATAC AAATGTGTTG TTCAGGAAGC AGATGATGAA 
    GGGTACACCG GAGTATCATT GTCGAGATCC ATCCCGCAAG TAGCCGGAGA AGCACTGAAA 
    ACTAACATGA CAACATTAGC TGCGCTTGTG CTGCCTTACT CTGAGCTAAT CCAATATGGT 
    CTATCAATTA TGTGGAAGAA AGTTTGGCCT CCTGCAAAGA AGAGAGGTTC CTGCATTCCA 
    GACTTCAAGA AGGCTTTTGA TCACTTTTGC ATTCATGCTG GTGGCAGAGC TGTGATTGGA 
    GCTATAAAGG AGTTCCTTAA GTTGAAAGAT AGGGATGTGG AGGCATCAAA AATGACACTT 
    TATAGGTTTG GGAACACATC TTCTTCATCA ACTTGGTACT CACTGAGCTA TCTTGAAGCA 
    AAAGGTAGGG TTAGACAGGG TGACAGGGTT TGGCAACTGG CATTTGGGAG TGGATTTAAA 
    TGTAATAGTG CAGTTTGGAA GTGCATTTCC AAGATCAAAC CAGATAATTT GAATGTTTGG 
    TCAGACAGGA TCGACCAGTA TCCAGTGGAA GTGCCAGCGG TAATGGATCA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319508.2
    CDS1..1374
    Translation

    Target ORF information:

    RefSeq Version XM_002319472.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0013s01660g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319472.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGCAAAAG ATCAGAGCTT CATGTTAGAG CAAACCAGGA TTGCTGAAAT CTTAATCCTG 
    GTTGCTGATT TCAGAGTGCT AGCAGCGGTT ACTCTCTCGG TGGCAATTGC TTTGTACCTT 
    TCATTCAATT CCAAGCATGT TTATCTTGTT GACTTCATGT GCTACAAGGC ACCAAACACT 
    CTCCGAGTTC CCCTCTCCTC CTTAATAGAA CATGTAGAAA GATGGGGTAA GTTTGACAGC 
    AAAACAATTG AGTTTCAAAC CAAAATCAGT GAAAGATCGG GTATTGGCAA CGAAACCTAC 
    TTGCCCACGG GAGTCCACCA ATTTCCATGT GATCTTTCCT TGAGTTCTAC CATTGAAGAA 
    GTGGAAATGG TGCTATTCAC AATAGTCCAA GACCTATTCA CCAAGCACAG GATTGATCCG 
    AAAAGCGTTG ACATTATCAT CACAAATTGC AGTCTTGTAT GCCCCACTCC ATCTTTAGCC 
    ACAATGATGA TCAATAAATT TGGATTTAGA AGCAATATAA GGAGCTTCAA TCTTTCTGGG 
    ATGGGCTGCA GTGCTGGCCT CTTGTCAATT TCGCTAGCTC GAGACCTCCT CGGAGCGCAC 
    AACAACTCTT TGGCTCTAGT CCTCAGCATG GAATCGGTGA GTTCCAACAT GTACCATGGA 
    CAAGTCAAGT CTATGCTACT GGCAAACTGC TTGTTTCGAA TGGGAGGTGC TGCGATTTTG 
    CTATCAAATC GCAAAAGTGA CAGACAGATT GCTAAATATG AACTCCAACA TCTGGTTAGG 
    ACTCATCTTG GATCTAAGGA TAATTCATAC AAATGTGTTG TTCAGGAAGC AGATGATGAA 
    GGGTACACCG GAGTATCATT GTCGAGATCC ATCCCGCAAG TAGCCGGAGA AGCACTGAAA 
    ACTAACATGA CAACATTAGC TGCGCTTGTG CTGCCTTACT CTGAGCTAAT CCAATATGGT 
    CTATCAATTA TGTGGAAGAA AGTTTGGCCT CCTGCAAAGA AGAGAGGTTC CTGCATTCCA 
    GACTTCAAGA AGGCTTTTGA TCACTTTTGC ATTCATGCTG GTGGCAGAGC TGTGATTGGA 
    GCTATAAAGG AGTTCCTTAA GTTGAAAGAT AGGGATGTGG AGGCATCAAA AATGACACTT 
    TATAGGTTTG GGAACACATC TTCTTCATCA ACTTGGTACT CACTGAGCTA TCTTGAAGCA 
    AAAGGTAGGG TTAGACAGGG TGACAGGGTT TGGCAACTGG CATTTGGGAG TGGATTTAAA 
    TGTAATAGTG CAGTTTGGAA GTGCATTTCC AAGATCAAAC CAGATAATTT GAATGTTTGG 
    TCAGACAGGA TCGACCAGTA TCCAGTGGAA GTGCCAGCGG TAATGGATCA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7478938 ( XM_002319472.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002319508.2 Populus trichocarpa 3-ketoacyl-CoA synthase 7 (LOC7478938), mRNA.
    Price & Availability↑
    CloneID OPa442053
    Clone ID Related Accession (Same CDS sequence) XM_002319472.3
    Accession Version XM_002319472.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1374bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 3-ketoacyl-CoA synthase 7
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002319472.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 8% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGCAAAAG ATCAGAGCTT CATGTTAGAG CAAACCAGGA TTGCTGAAAT CTTAATCCTG 
    GTTGCTGATT TCAGAGTGCT AGCAGCGGTT ACTCTCTCGG TGGCAATTGC TTTGTACCTT 
    TCATTCAATT CCAAGCATGT TTATCTTGTT GACTTCATGT GCTACAAGGC ACCAAACACT 
    CTCCGAGTTC CCCTCTCCTC CTTAATAGAA CATGTAGAAA GATGGGGTAA GTTTGACAGC 
    AAAACAATTG AGTTTCAAAC CAAAATCAGT GAAAGATCGG GTATTGGCAA CGAAACCTAC 
    TTGCCCACGG GAGTCCACCA ATTTCCATGT GATCTTTCCT TGAGTTCTAC CATTGAAGAA 
    GTGGAAATGG TGCTATTCAC AATAGTCCAA GACCTATTCA CCAAGCACAG GATTGATCCG 
    AAAAGCGTTG ACATTATCAT CACAAATTGC AGTCTTGTAT GCCCCACTCC ATCTTTAGCC 
    ACAATGATGA TCAATAAATT TGGATTTAGA AGCAATATAA GGAGCTTCAA TCTTTCTGGG 
    ATGGGCTGCA GTGCTGGCCT CTTGTCAATT TCGCTAGCTC GAGACCTCCT CGGCGCGCAC 
    AACAACTCTT TGGCTCTAGT CCTCAGCATG GAATCAGTGA GTTCCAACAT GTACCATGGA 
    CAAGTCAAGT CTATGCTACT GGCAAACTGC TTGTTTCGAA TGGGAGGTGC TGCGATTTTG 
    CTATCAAATC GCAAAAGTGA CAGACAGATT GCTAAATATG AACTCCAACA TCTGGTTAGG 
    ACTCATCTTG GATCTAAGGA TAATTCATAC AAATGTGTTG TTCAGGAAGC AGATGATGAA 
    GGGTACACCG GAGTATCATT GTCGAGATCC ATCCCGCAAG TAGCCGGAGA AGCACTGAAA 
    ACTAACATGA CAACATTAGC TGCGCTTGTG CTGCCTTACT CTGAGCTAAT CCAATATGGT 
    CTATCAATTA TGTGGAAGAA AGTTTGGCCT CCTGCAAAGA AGAGAGGTTC CTGCATTCCA 
    GACTTCAAGA AGGCTTTTGA TCACTTTTGC ATTCATGCTG GTGGCAGAGC TGTGATTGGA 
    GCTATAAAGG AGTTCCTTAA GTTGAAAGAT AGGGATGTGG AGGCATCAAA AATGACACTT 
    TATAGGTTTG GGAACACATC TTCTTCATCA ACTTGGTACT CACTGAGCTA TCTTGAAGCA 
    AAAGGTAGGG TTAGACAGGG TGACAGGGTT TGGCAACTGG CATTTGGGAG TGGATTTAAA 
    TGTAATAGTG CAGTTTGGAA GTGCATTTCC AAGATCAAAC CAGATAATTT GAATGTTTGG 
    TCAGACAGGA TCGACCAGTA TCCAGTGGAA GTGCCAGCGG TAATGGATCA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319508.2
    CDS1..1374
    Translation

    Target ORF information:

    RefSeq Version XM_002319472.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 3-ketoacyl-CoA synthase 7 (LOC7478938), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319472.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGCAAAAG ATCAGAGCTT CATGTTAGAG CAAACCAGGA TTGCTGAAAT CTTAATCCTG 
    GTTGCTGATT TCAGAGTGCT AGCAGCGGTT ACTCTCTCGG TGGCAATTGC TTTGTACCTT 
    TCATTCAATT CCAAGCATGT TTATCTTGTT GACTTCATGT GCTACAAGGC ACCAAACACT 
    CTCCGAGTTC CCCTCTCCTC CTTAATAGAA CATGTAGAAA GATGGGGTAA GTTTGACAGC 
    AAAACAATTG AGTTTCAAAC CAAAATCAGT GAAAGATCGG GTATTGGCAA CGAAACCTAC 
    TTGCCCACGG GAGTCCACCA ATTTCCATGT GATCTTTCCT TGAGTTCTAC CATTGAAGAA 
    GTGGAAATGG TGCTATTCAC AATAGTCCAA GACCTATTCA CCAAGCACAG GATTGATCCG 
    AAAAGCGTTG ACATTATCAT CACAAATTGC AGTCTTGTAT GCCCCACTCC ATCTTTAGCC 
    ACAATGATGA TCAATAAATT TGGATTTAGA AGCAATATAA GGAGCTTCAA TCTTTCTGGG 
    ATGGGCTGCA GTGCTGGCCT CTTGTCAATT TCGCTAGCTC GAGACCTCCT CGGCGCGCAC 
    AACAACTCTT TGGCTCTAGT CCTCAGCATG GAATCAGTGA GTTCCAACAT GTACCATGGA 
    CAAGTCAAGT CTATGCTACT GGCAAACTGC TTGTTTCGAA TGGGAGGTGC TGCGATTTTG 
    CTATCAAATC GCAAAAGTGA CAGACAGATT GCTAAATATG AACTCCAACA TCTGGTTAGG 
    ACTCATCTTG GATCTAAGGA TAATTCATAC AAATGTGTTG TTCAGGAAGC AGATGATGAA 
    GGGTACACCG GAGTATCATT GTCGAGATCC ATCCCGCAAG TAGCCGGAGA AGCACTGAAA 
    ACTAACATGA CAACATTAGC TGCGCTTGTG CTGCCTTACT CTGAGCTAAT CCAATATGGT 
    CTATCAATTA TGTGGAAGAA AGTTTGGCCT CCTGCAAAGA AGAGAGGTTC CTGCATTCCA 
    GACTTCAAGA AGGCTTTTGA TCACTTTTGC ATTCATGCTG GTGGCAGAGC TGTGATTGGA 
    GCTATAAAGG AGTTCCTTAA GTTGAAAGAT AGGGATGTGG AGGCATCAAA AATGACACTT 
    TATAGGTTTG GGAACACATC TTCTTCATCA ACTTGGTACT CACTGAGCTA TCTTGAAGCA 
    AAAGGTAGGG TTAGACAGGG TGACAGGGTT TGGCAACTGG CATTTGGGAG TGGATTTAAA 
    TGTAATAGTG CAGTTTGGAA GTGCATTTCC AAGATCAAAC CAGATAATTT GAATGTTTGG 
    TCAGACAGGA TCGACCAGTA TCCAGTGGAA GTGCCAGCGG TAATGGATCA TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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