ORF » Species Summary » Populus trichocarpa » POPTR_0001s36630g cDNA ORF clone

POPTR_0001s36630g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s36630g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s36630g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01468 XM_002298783.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s36630g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa420424 XM_024595089.1
Latest version!		 Populus trichocarpa EH domain-containing protein 1 (LOC7478702), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s36630g ( XM_002298783.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298819.2 Populus trichocarpa hypothetical protein (POPTR_0001s36630g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01468
    Clone ID Related Accession (Same CDS sequence) XM_002298783.2
    Accession Version XM_002298783.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1539bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002298783.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGAAATAT CTTCAGGCGC TATTGGTTCC TGCTCGAAAG ACCAAAAAAC CATGTATCAA 
    GAGTGGTTTC ATTATGCCGA TTCAGATGGT GATGGTCGAA TTACTGGTAA TGATGCTACC 
    AAATTCTTTT CATTGTCTAA ATTATCTCGC CAGGATCTCA AGCCGGTATG GGCCATTGCA 
    GATTCAAAGC GACAGGGATA TCTTGGCTTC ATCGAGTTCA TCATTGCTAT GCAGTTAGTT 
    TCTCTGGCGC AATCTGGGCG TGAAATAACA AATGATATCC TCAATAGCGA TGTTGACTTT 
    CAAAGTCTTA AACCTCCGTC CATGGAAGGT TTGGATGCGT TAATGGCGAA GAAAAGGCGT 
    TCTTTGAAAT CAAATGATAA TGAAGCAAAT GGTACTCCGA CAGTGCAATC AACACCTTCG 
    GCAAATTGGT TTTCTTCAAA ACCATCAAGA AAGGCATCAC TGTCCTCTGT TACATCAATA 
    ATTGACGGCT TGAAGAGACT GTACATTCAG AAGCTGAAGC CATTAGAAGT TACTTATCGT 
    TTTAATGATT TTGTATCTCC AGCCTTGACA AATAGTGATT TTGATGCCAA ACCTATGGTT 
    ATGCTTTTGG GTCAATACTC AACTGGAAAA ACTACATTCA TTAAGCATTT ACTTAGAAGC 
    AGTTATCCAG GAGCTCATAT TGGACCTGAG CCTACAACGG ACAGATTTGT TGTTGTAATG 
    TCTGGAACTG ATGAAAGAAG TGTTCCAGGC AACACAATTG CAGTTCAAGC TGATATGCCA 
    TTCAGTGGAC TCACAACTTT TGGAACTGCA TTTTTGTCAA AATTTGAATG TTCTCAAATG 
    CCACATCCTC TGCTGGAGCA TATTACATTT GTGGACACAC CTGGAGTTTT ATCAGGAGAA 
    AAACAACGGA CACAACGAGC TTATGATTTT ACAGGTGTAA CATCATGGTT TGCTGCAAAA 
    TGTGACCTCA TTCTCCTTCT GTTTGATCCT CACAAACTTG ATGTCAGTGA TGAGTTCAAG 
    CGTGTTATTT CATCTTTACA CGGTCATGAT GACAAAATTC GTGTTGTTCT CAACAAGGCA 
    GATCAAGTGG ATACTCAGCA ACTTATGAGA GTCTATGGAG CTTTAATGTG GTCACTTGGG 
    AAAGTTCTCA ATACTCCAGA AGTTATGCGT GTCTATATTG GCTCATTCAA TGACAAACCA 
    GTAAATGCGA TAAATGAATT CGTTAAACGT GCTAGAGCTG CCAAGATACA TGCTTACATT 
    ATTAGCCATC TTAAAAAGGA GATGCCCGCA ATGATGGGCA AAGCAAAGGC TCAACAGAGA 
    CTTCTTGATA ATTTGGCAGA GGAGTTTGGA AAGGTCCAAA GGGAGTTCCA TTTACCTCCA 
    GGTGATTTCC CAAACGTGGA GCAATTCAGG GAGGTTCTGA GTGGTTACAA CTTCGACAAG 
    TTTGAGAAAT TAAAGCCTAA AATGATACAA GCTGTGGATG ACATGCTAGG TTATGACATC 
    CCAGACCTGT TAAAAAACTT CAGAAACCCA TACGATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298819.2
    CDS189..1727
    Translation

    Target ORF information:

    RefSeq Version XM_002298783.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s36630g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002298783.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGAAATAT CTTCAGGCGC TATTGGTTCC TGCTCGAAAG ACCAAAAAAC CATGTATCAA 
    GAGTGGTTTC ATTATGCCGA TTCAGATGGT GATGGTCGAA TTACTGGTAA TGATGCTACC 
    AAATTCTTTT CATTGTCTAA ATTATCTCGC CAGGATCTCA AGCCGGTATG GGCCATTGCA 
    GATTCAAAGC GACAGGGATA TCTTGGCTTC ATCGAGTTCA TCATTGCTAT GCAGTTAGTT 
    TCTCTGGCGC AATCTGGGCG TGAAATAACA AATGATATCC TCAATAGCGA TGTTGACTTT 
    CAAAGTCTTA AACCTCCGTC CATGGAAGGT TTGGATGCGT TAATGGCGAA GAAAAGGCGT 
    TCTTTGAAAT CAAATGATAA TGAAGCAAAT GGTACTCCGA CAGTGCAATC AACACCTTCG 
    GCAAATTGGT TTTCTTCAAA ACCATCAAGA AAGGCATCAC TGTCCTCTGT TACATCAATA 
    ATTGACGGCT TGAAGAGACT GTACATTCAG AAGCTGAAGC CATTAGAAGT TACTTATCGT 
    TTTAATGATT TTGTATCTCC AGCCTTGACA AATAGTGATT TTGATGCCAA ACCTATGGTT 
    ATGCTTTTGG GTCAATACTC AACTGGAAAA ACTACATTCA TTAAGCATTT ACTTAGAAGC 
    AGTTATCCAG GAGCTCATAT TGGACCTGAG CCTACAACGG ACAGATTTGT TGTTGTAATG 
    TCTGGAACTG ATGAAAGAAG TGTTCCAGGC AACACAATTG CAGTTCAAGC TGATATGCCA 
    TTCAGTGGAC TCACAACTTT TGGAACTGCA TTTTTGTCAA AATTTGAATG TTCTCAAATG 
    CCACATCCTC TGCTGGAGCA TATTACATTT GTGGACACAC CTGGAGTTTT ATCAGGAGAA 
    AAACAACGGA CACAACGAGC TTATGATTTT ACAGGTGTAA CATCATGGTT TGCTGCAAAA 
    TGTGACCTCA TTCTCCTTCT GTTTGATCCT CACAAACTTG ATGTCAGTGA TGAGTTCAAG 
    CGTGTTATTT CATCTTTACA CGGTCATGAT GACAAAATTC GTGTTGTTCT CAACAAGGCA 
    GATCAAGTGG ATACTCAGCA ACTTATGAGA GTCTATGGAG CTTTAATGTG GTCACTTGGG 
    AAAGTTCTCA ATACTCCAGA AGTTATGCGT GTCTATATTG GCTCATTCAA TGACAAACCA 
    GTAAATGCGA TAAATGAATT CGTTAAACGT GCTAGAGCTG CCAAGATACA TGCTTACATT 
    ATTAGCCATC TTAAAAAGGA GATGCCCGCA ATGATGGGCA AAGCAAAGGC TCAACAGAGA 
    CTTCTTGATA ATTTGGCAGA GGAGTTTGGA AAGGTCCAAA GGGAGTTCCA TTTACCTCCA 
    GGTGATTTCC CAAACGTGGA GCAATTCAGG GAGGTTCTGA GTGGTTACAA CTTCGACAAG 
    TTTGAGAAAT TAAAGCCTAA AATGATACAA GCTGTGGATG ACATGCTAGG TTATGACATC 
    CCAGACCTGT TAAAAAACTT CAGAAACCCA TACGATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s36630g ( XM_024595089.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024450857.1 Populus trichocarpa EH domain-containing protein 1 (LOC7478702), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa420424
    Clone ID Related Accession (Same CDS sequence) XM_024595089.1
    Accession Version XM_024595089.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1638bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product EH domain-containing protein 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGAAATAT CTTCAGGCGC TATTGGTTCC TGCTCGAAAG ACCAAAAAAC CATGTATCAA 
    GAGTGGTTTC ATTATGCCGA TTCAGATGGT GATGGTCGAA TTACTGGTAA TGATGCTACC 
    AAATTCTTTT CATTGTCTAA ATTATCTCGC CAGGATCTCA AGCCGGTATG GGCCATTGCA 
    GATTCAAAGC GACAGGGATA TCTTGGCTTC ATCGAGTTCA TCATTGCTAT GCAGTTAGTT 
    TCTCTGGCGC AATCTGGGCG TGAAATAACA AATGATATCC TCAATAGCGA TGTTGACTTT 
    CAAAGTCTTA AACCTCCGTC CATGGAAGGT TTGGATGCGT TAATGGCGAA GAAAAGGCGT 
    TCTTTGAAAT CAAATGATAA TGAAGCAAAT GGTACTCCGA CAGTGCAATC AACACCTTCG 
    GCAAATTGGT TTTCTTCAAA ACCATCAAGA AAGGCATCAC TGTCCTCTGT TACATCAATA 
    ATTGACGGCT TGAAGAGACT GTACATTCAG AAGCTGAAGC CATTAGAAGT TACTTATCGT 
    TTTAATGATT TTGTATCTCC AGCCTTGACA AATAGTGATT TTGATGCCAA ACCTATGGTT 
    ATGCTTTTGG GTCAATACTC AACTGGAAAA ACTACATTCA TTAAGCATTT ACTTAGAAGC 
    AGTTATCCAG GAGCTCATAT TGGACCTGAG CCTACAACGG ACAGATTTGT TGTTGTAATG 
    TCTGGAACTG ATGAAAGAAG TGTTCCAGGC AACACAATTG CAGTTCAAGC TGATATGCCA 
    TTCAGTGGAC TCACAACTTT TGGAACTGCA TTTTTGTCAA AATTTGAATG TTCTCAAATG 
    CCACATCCTC TGCTGGAGCA TATTACATTT GTGGACACAC CTGGAGTTTT ATCAGGAGAA 
    AAACAACGGA CACAACGAGC TTATGATTTT ACAGGTGTAA CATCATGGTT TGCTGCAAAA 
    TGTGACCTCA TTCTCCTTCT GTTTGATCCT CACAAACTTG ATGTCAGTGA TGAGTTCAAG 
    CGTGTTATTT CATCTTTACA CGGTCATGAT GACAAAATTC GTGTTGTTCT CAACAAGGCA 
    GATCAAGTGG ATACTCAGCA ACTTATGAGA GTCTATGGAG CTTTAATGTG GTCACTTGGG 
    AAAGTTCTCA ATACTCCAGA AGTTATGCGT GTCTATATTG GCTCATTCAA TGACAAACCA 
    GTAAATGAAG CTGCTGTTGG TCCAATTGGG AAAGAACTTT TCGAGAAAGA ACAGGAGGAC 
    CTTCTTTCTG ATCTAAAAAA TATACCAAAA AAGGCTTGTG ATCGTCGGAT AAATGAATTC 
    GTTAAACGTG CTAGAGCTGC CAAGATACAT GCTTACATTA TTAGCCATCT TAAAAAGGAG 
    ATGCCCGCAA TGATGGGCAA AGCAAAGGCT CAACAGAGAC TTCTTGATAA TTTGGCAGAG 
    GAGTTTGGAA AGGTCCAAAG GGAGTTCCAT TTACCTCCAG GTGATTTCCC AAACGTGGAG 
    CAATTCAGGG AGGTTCTGAG TGGTTACAAC TTCGACAAGT TTGAGAAATT AAAGCCTAAA 
    ATGATACAAG CTGTGGATGA CATGCTAGGT TATGACATCC CAGACCTGTT AAAAAACTTC 
    AGAAACCCAT ACGATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450857.1
    CDS189..1826
    Translation

    Target ORF information:

    RefSeq Version XM_024595089.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa EH domain-containing protein 1 (LOC7478702), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024595089.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGAAATAT CTTCAGGCGC TATTGGTTCC TGCTCGAAAG ACCAAAAAAC CATGTATCAA 
    GAGTGGTTTC ATTATGCCGA TTCAGATGGT GATGGTCGAA TTACTGGTAA TGATGCTACC 
    AAATTCTTTT CATTGTCTAA ATTATCTCGC CAGGATCTCA AGCCGGTATG GGCCATTGCA 
    GATTCAAAGC GACAGGGATA TCTTGGCTTC ATCGAGTTCA TCATTGCTAT GCAGTTAGTT 
    TCTCTGGCGC AATCTGGGCG TGAAATAACA AATGATATCC TCAATAGCGA TGTTGACTTT 
    CAAAGTCTTA AACCTCCGTC CATGGAAGGT TTGGATGCGT TAATGGCGAA GAAAAGGCGT 
    TCTTTGAAAT CAAATGATAA TGAAGCAAAT GGTACTCCGA CAGTGCAATC AACACCTTCG 
    GCAAATTGGT TTTCTTCAAA ACCATCAAGA AAGGCATCAC TGTCCTCTGT TACATCAATA 
    ATTGACGGCT TGAAGAGACT GTACATTCAG AAGCTGAAGC CATTAGAAGT TACTTATCGT 
    TTTAATGATT TTGTATCTCC AGCCTTGACA AATAGTGATT TTGATGCCAA ACCTATGGTT 
    ATGCTTTTGG GTCAATACTC AACTGGAAAA ACTACATTCA TTAAGCATTT ACTTAGAAGC 
    AGTTATCCAG GAGCTCATAT TGGACCTGAG CCTACAACGG ACAGATTTGT TGTTGTAATG 
    TCTGGAACTG ATGAAAGAAG TGTTCCAGGC AACACAATTG CAGTTCAAGC TGATATGCCA 
    TTCAGTGGAC TCACAACTTT TGGAACTGCA TTTTTGTCAA AATTTGAATG TTCTCAAATG 
    CCACATCCTC TGCTGGAGCA TATTACATTT GTGGACACAC CTGGAGTTTT ATCAGGAGAA 
    AAACAACGGA CACAACGAGC TTATGATTTT ACAGGTGTAA CATCATGGTT TGCTGCAAAA 
    TGTGACCTCA TTCTCCTTCT GTTTGATCCT CACAAACTTG ATGTCAGTGA TGAGTTCAAG 
    CGTGTTATTT CATCTTTACA CGGTCATGAT GACAAAATTC GTGTTGTTCT CAACAAGGCA 
    GATCAAGTGG ATACTCAGCA ACTTATGAGA GTCTATGGAG CTTTAATGTG GTCACTTGGG 
    AAAGTTCTCA ATACTCCAGA AGTTATGCGT GTCTATATTG GCTCATTCAA TGACAAACCA 
    GTAAATGAAG CTGCTGTTGG TCCAATTGGG AAAGAACTTT TCGAGAAAGA ACAGGAGGAC 
    CTTCTTTCTG ATCTAAAAAA TATACCAAAA AAGGCTTGTG ATCGTCGGAT AAATGAATTC 
    GTTAAACGTG CTAGAGCTGC CAAGATACAT GCTTACATTA TTAGCCATCT TAAAAAGGAG 
    ATGCCCGCAA TGATGGGCAA AGCAAAGGCT CAACAGAGAC TTCTTGATAA TTTGGCAGAG 
    GAGTTTGGAA AGGTCCAAAG GGAGTTCCAT TTACCTCCAG GTGATTTCCC AAACGTGGAG 
    CAATTCAGGG AGGTTCTGAG TGGTTACAAC TTCGACAAGT TTGAGAAATT AAAGCCTAAA 
    ATGATACAAG CTGTGGATGA CATGCTAGGT TATGACATCC CAGACCTGTT AAAAAACTTC 
    AGAAACCCAT ACGATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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