ORF » Species Summary » Populus trichocarpa » LOC7475954 cDNA ORF clone

LOC7475954 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7475954 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7475954 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa23405 XM_002315522.3
Latest version!		 Populus trichocarpa 60S ribosome subunit biogenesis protein NIP7 homolog (LOC7475954), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
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OPa23405 XM_002315522.2 Populus trichocarpa 60S ribosome subunit biogenesis family protein (POPTR_0010s02520g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7475954 ( XM_002315522.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002315558.1 Populus trichocarpa 60S ribosome subunit biogenesis family protein (POPTR_0010s02520g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa23405
    Clone ID Related Accession (Same CDS sequence) XM_002315522.2 , XM_002315522.3
    Accession Version XM_002315522.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 564bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product 60S ribosome subunit biogenesis family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). On Dec 16, 2013 this sequence version replaced XM_002315522.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGAGGCCTT TGGACGAGAA AGAGATGGGT GAAGTTTTCA AGAAACTGAT GTTGTTCACA 
    GGAAACAACC TCAAAAACAT CATTGAAAGC CCATCACATG AAGGACCAGA CCCGAACCCA 
    GGTCGGTACT GCTTCAGGCT CCACAAAAAC AAGGTATTTT ACATCAGTGA ATCAATAGTG 
    AAGCGAGCAA CAAACATTGG CCGCAAAAAT TTGGTATCTT TAGGTACTTG TATTGGGAAA 
    TTCACTCATA GGGGTGATTT TAGATTGACT ACACAATCAC TGAATTTATT GGCTGCAAAT 
    GCTAAAAATA AAGTTTGGTT GAAGCCCACT TCAGAGATGT CTTTTTTGTA TGGGAATCAT 
    GTGTTAAAAG GCGGGTTAGG GAAGATTACT GATAGTATCA ATCAAAATGA TGGGGTTGTC 
    GTGTTTTCTA TGAGTGATGT GCCTTTGGGG TTTGGAACCG CCGCCAGGTC GACACAGGAT 
    TGTAGGAAGT GTGATCCTAA TGGGATTGTT GTGCATCACT ACTCTGATAT TGGTGAGTAT 
    TTGAGAGATG AAGATGATCT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002315558.1
    CDS79..642
    Translation

    Target ORF information:

    RefSeq Version XM_002315522.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa 60S ribosome subunit biogenesis family protein (POPTR_0010s02520g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002315522.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGAGGCCTT TGGACGAGAA AGAGATGGGT GAAGTTTTCA AGAAACTGAT GTTGTTCACA 
    GGAAACAACC TCAAAAACAT CATTGAAAGC CCATCACATG AAGGACCAGA CCCGAACCCA 
    GGTCGGTACT GCTTCAGGCT CCACAAAAAC AAGGTATTTT ACATCAGTGA ATCAATAGTG 
    AAGCGAGCAA CAAACATTGG CCGCAAAAAT TTGGTATCTT TAGGTACTTG TATTGGGAAA 
    TTCACTCATA GGGGTGATTT TAGATTGACT ACACAATCAC TGAATTTATT GGCTGCAAAT 
    GCTAAAAATA AAGTTTGGTT GAAGCCCACT TCAGAGATGT CTTTTTTGTA TGGGAATCAT 
    GTGTTAAAAG GCGGGTTAGG GAAGATTACT GATAGTATCA ATCAAAATGA TGGGGTTGTC 
    GTGTTTTCTA TGAGTGATGT GCCTTTGGGG TTTGGAACCG CCGCCAGGTC GACACAGGAT 
    TGTAGGAAGT GTGATCCTAA TGGGATTGTT GTGCATCACT ACTCTGATAT TGGTGAGTAT 
    TTGAGAGATG AAGATGATCT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7475954 ( XM_002315522.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002315558.1 Populus trichocarpa 60S ribosome subunit biogenesis protein NIP7 homolog (LOC7475954), mRNA.
    Price & Availability↑
    CloneID OPa23405
    Clone ID Related Accession (Same CDS sequence) XM_002315522.2 , XM_002315522.3
    Accession Version XM_002315522.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 564bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 60S ribosome subunit biogenesis protein NIP7 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002315522.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGAGGCCTT TGGACGAGAA AGAGATGGGT GAAGTTTTCA AGAAACTGAT GTTGTTCACA 
    GGAAACAACC TCAAAAACAT CATTGAAAGC CCATCACATG AAGGACCAGA CCCGAACCCA 
    GGTCGGTACT GCTTCAGGCT CCACAAAAAC AAGGTATTTT ACATCAGTGA ATCAATAGTG 
    AAGCGAGCAA CAAACATTGG CCGCAAAAAT TTGGTATCTT TAGGTACTTG TATTGGGAAA 
    TTCACTCATA GGGGTGATTT TAGATTGACT ACACAATCAC TGAATTTATT GGCTGCAAAT 
    GCTAAAAATA AAGTTTGGTT GAAGCCCACT TCAGAGATGT CTTTTTTGTA TGGGAATCAT 
    GTGTTAAAAG GCGGGTTAGG GAAGATTACT GATAGTATCA ATCAAAATGA TGGGGTTGTC 
    GTGTTTTCTA TGAGTGATGT GCCTTTGGGG TTTGGAACCG CCGCCAGGTC GACACAGGAT 
    TGTAGGAAGT GTGATCCTAA TGGGATTGTT GTGCATCACT ACTCTGATAT TGGTGAGTAT 
    TTGAGAGATG AAGATGATCT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002315558.1
    CDS131..694
    Translation

    Target ORF information:

    RefSeq Version XM_002315522.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 60S ribosome subunit biogenesis protein NIP7 homolog (LOC7475954), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002315522.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGAGGCCTT TGGACGAGAA AGAGATGGGT GAAGTTTTCA AGAAACTGAT GTTGTTCACA 
    GGAAACAACC TCAAAAACAT CATTGAAAGC CCATCACATG AAGGACCAGA CCCGAACCCA 
    GGTCGGTACT GCTTCAGGCT CCACAAAAAC AAGGTATTTT ACATCAGTGA ATCAATAGTG 
    AAGCGAGCAA CAAACATTGG CCGCAAAAAT TTGGTATCTT TAGGTACTTG TATTGGGAAA 
    TTCACTCATA GGGGTGATTT TAGATTGACT ACACAATCAC TGAATTTATT GGCTGCAAAT 
    GCTAAAAATA AAGTTTGGTT GAAGCCCACT TCAGAGATGT CTTTTTTGTA TGGGAATCAT 
    GTGTTAAAAG GCGGGTTAGG GAAGATTACT GATAGTATCA ATCAAAATGA TGGGGTTGTC 
    GTGTTTTCTA TGAGTGATGT GCCTTTGGGG TTTGGAACCG CCGCCAGGTC GACACAGGAT 
    TGTAGGAAGT GTGATCCTAA TGGGATTGTT GTGCATCACT ACTCTGATAT TGGTGAGTAT 
    TTGAGAGATG AAGATGATCT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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