ORF » Species Summary » Populus trichocarpa » POPTR_0005s20530g cDNA ORF clone

POPTR_0005s20530g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0005s20530g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0005s20530g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa11981 XM_002307425.2
Latest version!		 Populus trichocarpa 1-aminocyclopropane-1-carboxylate oxidase 5 (LOC7469176), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
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OPa11981 XM_002307425.1 Populus trichocarpa 1-aminocyclopropane-1-carboxylate oxidase family protein (POPTR_0005s20530g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0005s20530g ( XM_002307425.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002307461.1 Populus trichocarpa 1-aminocyclopropane-1-carboxylate oxidase 5 (LOC7469176), mRNA.
    Price & Availability↑
    CloneID OPa11981
    Clone ID Related Accession (Same CDS sequence) XM_002307425.2 , XM_002307425.1
    Accession Version XM_002307425.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 933bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 1-aminocyclopropane-1-carboxylate oxidase 5
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002307425.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAATTC CAGTGATTGA TTTCTCTAAG GTCAATGGCA CAGGCGAAGA GAGGGCCAAG 
    ACAATGGCTC AGATTGCCAA TGGATGCGAG GAGTGGGGTT TCTTCCAGCT GATGAACCAT 
    GGAATCCCAG AGGAGCTCCT AGAGAGGGTG AAGAAGGTTA GCTCAGAATA CTTTAAGCTG 
    GAAAGAGAGG AAACCTTCAA GAACTCAACA GTAGCAAAGA CTTTGAATGA CTTAGCTGGG 
    AAGAAGAGCG GTGAGAAATT GGAGAGTGTG GACTGGGAAG ATGTTATCAC TCTCCTAGAT 
    AACAACGAGT GGCCATCTAA AACCCCCGGA TTCAAGGAAA CCATGACTGA ATACCGTGCT 
    GAGCTGAAGA AATTGGCCGA GAAGGTCATG GAAGTGATGG ATGAGAACTT GGACTTACCA 
    AAAGGATACA TCAAGAAGGC ATTCAATGAT GGAGAAGGAG ACGGTGCCTT CTTTGGTACC 
    AAGGTTAGCC ACTACCCACC ATGTCCTCAT CCTGAGCTAG TCAATGGCCT CCGAGCCCAC 
    ACCGATGCTG GGGGTGTCAT CTTACTCTTC CAAGATGATG AGGTAGGCGG CCTTCAAATT 
    CTCAAAGATG GGCAATGGAT TGATGTCCAG CCAATGAAGA ACACTATTGT CATCAATACC 
    GGTGATCAGA TTGAGGTCCT TAGCAATGGC CGATATAAGA GTACGTGGCA CCGTGTTTTG 
    GCCTCCCCGG ACGGGAACAG AAGGTCGATT GCTTCTTTCT ATAATCCATC GCTTAAGGCC 
    ACTGTAGCTC CTGCACCAGC ATTGGTGGAG AAAGATAGCG AAAAGATCAA TCAAACTTAC 
    CCCAAGTTTT TGTTTGGTGA TTACATGTCT GTTTATGCTG AGCAGAAGTT CCTTCCGAAA 
    GAGCCCAGGT TCCAAGCTGC AACGGCCATG TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307461.1
    CDS86..1018
    Translation

    Target ORF information:

    RefSeq Version XM_002307425.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 1-aminocyclopropane-1-carboxylate oxidase 5 (LOC7469176), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307425.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAATTC CAGTGATTGA TTTCTCTAAG GTCAATGGCA CAGGCGAAGA GAGGGCCAAG 
    ACAATGGCTC AGATTGCCAA TGGATGCGAG GAGTGGGGTT TCTTCCAGCT GATGAACCAT 
    GGAATCCCAG AGGAGCTCCT AGAGAGGGTG AAGAAGGTTA GCTCAGAATA CTTTAAGCTG 
    GAAAGAGAGG AAACCTTCAA GAACTCAACA GTAGCAAAGA CTTTGAATGA CTTAGCTGGG 
    AAGAAGAGCG GTGAGAAATT GGAGAGTGTG GACTGGGAAG ATGTTATCAC TCTCCTAGAT 
    AACAACGAGT GGCCATCTAA AACCCCCGGA TTCAAGGAAA CCATGACTGA ATACCGTGCT 
    GAGCTGAAGA AATTGGCCGA GAAGGTCATG GAAGTGATGG ATGAGAACTT GGACTTACCA 
    AAAGGATACA TCAAGAAGGC ATTCAATGAT GGAGAAGGAG ACGGTGCCTT CTTTGGTACC 
    AAGGTTAGCC ACTACCCACC ATGTCCTCAT CCTGAGCTAG TCAATGGCCT CCGAGCCCAC 
    ACCGATGCTG GGGGTGTCAT CTTACTCTTC CAAGATGATG AGGTAGGCGG CCTTCAAATT 
    CTCAAAGATG GGCAATGGAT TGATGTCCAG CCAATGAAGA ACACTATTGT CATCAATACC 
    GGTGATCAGA TTGAGGTCCT TAGCAATGGC CGATATAAGA GTACGTGGCA CCGTGTTTTG 
    GCCTCCCCGG ACGGGAACAG AAGGTCGATT GCTTCTTTCT ATAATCCATC GCTTAAGGCC 
    ACTGTAGCTC CTGCACCAGC ATTGGTGGAG AAAGATAGCG AAAAGATCAA TCAAACTTAC 
    CCCAAGTTTT TGTTTGGTGA TTACATGTCT GTTTATGCTG AGCAGAAGTT CCTTCCGAAA 
    GAGCCCAGGT TCCAAGCTGC AACGGCCATG TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0005s20530g ( XM_002307425.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002307461.1 Populus trichocarpa 1-aminocyclopropane-1-carboxylate oxidase family protein (POPTR_0005s20530g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa11981
    Clone ID Related Accession (Same CDS sequence) XM_002307425.2 , XM_002307425.1
    Accession Version XM_002307425.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 933bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product 1-aminocyclopropane-1-carboxylate oxidase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAATTC CAGTGATTGA TTTCTCTAAG GTCAATGGCA CAGGCGAAGA GAGGGCCAAG 
    ACAATGGCTC AGATTGCCAA TGGATGCGAG GAGTGGGGTT TCTTCCAGCT GATGAACCAT 
    GGAATCCCAG AGGAGCTCCT AGAGAGGGTG AAGAAGGTTA GCTCAGAATA CTTTAAGCTG 
    GAAAGAGAGG AAACCTTCAA GAACTCAACA GTAGCAAAGA CTTTGAATGA CTTAGCTGGG 
    AAGAAGAGCG GTGAGAAATT GGAGAGTGTG GACTGGGAAG ATGTTATCAC TCTCCTAGAT 
    AACAACGAGT GGCCATCTAA AACCCCCGGA TTCAAGGAAA CCATGACTGA ATACCGTGCT 
    GAGCTGAAGA AATTGGCCGA GAAGGTCATG GAAGTGATGG ATGAGAACTT GGACTTACCA 
    AAAGGATACA TCAAGAAGGC ATTCAATGAT GGAGAAGGAG ACGGTGCCTT CTTTGGTACC 
    AAGGTTAGCC ACTACCCACC ATGTCCTCAT CCTGAGCTAG TCAATGGCCT CCGAGCCCAC 
    ACCGATGCTG GGGGTGTCAT CTTACTCTTC CAAGATGATG AGGTAGGCGG CCTTCAAATT 
    CTCAAAGATG GGCAATGGAT TGATGTCCAG CCAATGAAGA ACACTATTGT CATCAATACC 
    GGTGATCAGA TTGAGGTCCT TAGCAATGGC CGATATAAGA GTACGTGGCA CCGTGTTTTG 
    GCCTCCCCGG ACGGGAACAG AAGGTCGATT GCTTCTTTCT ATAATCCATC GCTTAAGGCC 
    ACTGTAGCTC CTGCACCAGC ATTGGTGGAG AAAGATAGCG AAAAGATCAA TCAAACTTAC 
    CCCAAGTTTT TGTTTGGTGA TTACATGTCT GTTTATGCTG AGCAGAAGTT CCTTCCGAAA 
    GAGCCCAGGT TCCAAGCTGC AACGGCCATG TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307461.1
    CDS72..1004
    Translation

    Target ORF information:

    RefSeq Version XM_002307425.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa 1-aminocyclopropane-1-carboxylate oxidase family protein (POPTR_0005s20530g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307425.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAATTC CAGTGATTGA TTTCTCTAAG GTCAATGGCA CAGGCGAAGA GAGGGCCAAG 
    ACAATGGCTC AGATTGCCAA TGGATGCGAG GAGTGGGGTT TCTTCCAGCT GATGAACCAT 
    GGAATCCCAG AGGAGCTCCT AGAGAGGGTG AAGAAGGTTA GCTCAGAATA CTTTAAGCTG 
    GAAAGAGAGG AAACCTTCAA GAACTCAACA GTAGCAAAGA CTTTGAATGA CTTAGCTGGG 
    AAGAAGAGCG GTGAGAAATT GGAGAGTGTG GACTGGGAAG ATGTTATCAC TCTCCTAGAT 
    AACAACGAGT GGCCATCTAA AACCCCCGGA TTCAAGGAAA CCATGACTGA ATACCGTGCT 
    GAGCTGAAGA AATTGGCCGA GAAGGTCATG GAAGTGATGG ATGAGAACTT GGACTTACCA 
    AAAGGATACA TCAAGAAGGC ATTCAATGAT GGAGAAGGAG ACGGTGCCTT CTTTGGTACC 
    AAGGTTAGCC ACTACCCACC ATGTCCTCAT CCTGAGCTAG TCAATGGCCT CCGAGCCCAC 
    ACCGATGCTG GGGGTGTCAT CTTACTCTTC CAAGATGATG AGGTAGGCGG CCTTCAAATT 
    CTCAAAGATG GGCAATGGAT TGATGTCCAG CCAATGAAGA ACACTATTGT CATCAATACC 
    GGTGATCAGA TTGAGGTCCT TAGCAATGGC CGATATAAGA GTACGTGGCA CCGTGTTTTG 
    GCCTCCCCGG ACGGGAACAG AAGGTCGATT GCTTCTTTCT ATAATCCATC GCTTAAGGCC 
    ACTGTAGCTC CTGCACCAGC ATTGGTGGAG AAAGATAGCG AAAAGATCAA TCAAACTTAC 
    CCCAAGTTTT TGTTTGGTGA TTACATGTCT GTTTATGCTG AGCAGAAGTT CCTTCCGAAA 
    GAGCCCAGGT TCCAAGCTGC AACGGCCATG TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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