ORF » Species Summary » Populus trichocarpa » POPTR_0007s05020g cDNA ORF clone

POPTR_0007s05020g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0007s05020g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0007s05020g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa17291 XM_002309923.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0007s05020g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa433105 XM_002309923.3
Latest version!		 Populus trichocarpa uncharacterized LOC7466787 (LOC7466787), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0007s05020g ( XM_002309923.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002309959.1 Populus trichocarpa hypothetical protein (POPTR_0007s05020g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa17291
    Clone ID Related Accession (Same CDS sequence) XM_002309923.2
    Accession Version XM_002309923.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 519bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008473). On Dec 16, 2013 this sequence version replaced XM_002309923.1. 

    1
    61
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    421
    481
    ATGATCACGA GATCAGGTCA CTCAAAAGCA AATTCAAAGT TAGGTTTGAT CATCACAGAC 
    AAGATTCAAA TCATGGGAGG GTATGAGCCA GAAAAACAAG TATGCAAGAT TCATCCGTAT 
    AATGATCAGA AACAAGGGGT TTGTGCATCA TGTTTAAGAG AGAGATTAAA GCAACTAATC 
    TATGTTAACA CTTCACAAGC TGCAATCATG GCACCTGCTT CATGTTCTTC TTCTCCTGAT 
    GATCCTTACT CCCCTGCTTC CTCTCGCCGC CGCCATAACC GGAACATTTC GGATAATAAT 
    AATAATAGTA TGGGTTCAAT ATCCTTCAGG GTAAGTATTG GTGATCGGTT AAAGAAGAGT 
    AGATCGCTTG CTTTTGTGTC AAGAAACCAT GTTGGAGAGG TCAAGAATGG GAAGAAGAAT 
    AATAATGGGT TTTGGACGAA GTTGCTTCAT TTGAAGGGAA AGAAGGATCA GGTTTTGATG 
    CGTTCTGGTG TCTCTATGAG TGAAAGGTTG TATAATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002309959.1
    CDS23..541
    Translation

    Target ORF information:

    RefSeq Version XM_002309923.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0007s05020g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002309923.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGATCACGA GATCAGGTCA CTCAAAAGCA AATTCAAAGT TAGGTTTGAT CATCACAGAC 
    AAGATTCAAA TCATGGGAGG GTATGAGCCA GAAAAACAAG TATGCAAGAT TCATCCGTAT 
    AATGATCAGA AACAAGGGGT TTGTGCATCA TGTTTAAGAG AGAGATTAAA GCAACTAATC 
    TATGTTAACA CTTCACAAGC TGCAATCATG GCACCTGCTT CATGTTCTTC TTCTCCTGAT 
    GATCCTTACT CCCCTGCTTC CTCTCGCCGC CGCCATAACC GGAACATTTC GGATAATAAT 
    AATAATAGTA TGGGTTCAAT ATCCTTCAGG GTAAGTATTG GTGATCGGTT AAAGAAGAGT 
    AGATCGCTTG CTTTTGTGTC AAGAAACCAT GTTGGAGAGG TCAAGAATGG GAAGAAGAAT 
    AATAATGGGT TTTGGACGAA GTTGCTTCAT TTGAAGGGAA AGAAGGATCA GGTTTTGATG 
    CGTTCTGGTG TCTCTATGAG TGAAAGGTTG TATAATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0007s05020g ( XM_002309923.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002309959.2 Populus trichocarpa uncharacterized LOC7466787 (LOC7466787), mRNA.
    Price & Availability↑
    CloneID OPa433105
    Clone ID Related Accession (Same CDS sequence) XM_002309923.3
    Accession Version XM_002309923.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 447bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uncharacterized protein LOC7466787
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037291.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002309923.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
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    421
    ATGGGAGGGT ATGAGCCAGA AAAACAAGTA TGCAAGATTC ATCCGTATAA TGATCAGAAA 
    CAAGGGGTTT GTGCATCATG TTTAAGAGAG AGATTAAAGC AACTAATCTA TGTTAACACT 
    TCACAAGCTG CAATCATGGC ACCTGCTTCA TGTTCTTCTT CTCCTGATGA TCCTTACTCC 
    CCTGCTTCCT CTCGCCGCCG CCATAACCGG AACATTTCGG ATAATAATAA TAATAGTATG 
    GGTTCAATAT CCTTCAGGGT AAGTATTGGT GATCGGTTAA AGAAGAGTAG ATCGCTTGCT 
    TTTGTGTCAA GAAACCATGT TGGAGAGGTC AAGAATGGGA AGAAGAATAA TAATGGGTTT 
    TGGACGAAGT TGCTTCATTT GAAGGGAAAG AAGGATCAGG TTTTGATGCG TTCTGGTGTC 
    TCTATGAGTG AAAGGTTGTA TAATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002309959.2
    CDS1..447
    Translation

    Target ORF information:

    RefSeq Version XM_002309923.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uncharacterized LOC7466787 (LOC7466787), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002309923.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    ATGGGAGGGT ATGAGCCAGA AAAACAAGTA TGCAAGATTC ATCCGTATAA TGATCAGAAA 
    CAAGGGGTTT GTGCATCATG TTTAAGAGAG AGATTAAAGC AACTAATCTA TGTTAACACT 
    TCACAAGCTG CAATCATGGC ACCTGCTTCA TGTTCTTCTT CTCCTGATGA TCCTTACTCC 
    CCTGCTTCCT CTCGCCGCCG CCATAACCGG AACATTTCGG ATAATAATAA TAATAGTATG 
    GGTTCAATAT CCTTCAGGGT AAGTATTGGT GATCGGTTAA AGAAGAGTAG ATCGCTTGCT 
    TTTGTGTCAA GAAACCATGT TGGAGAGGTC AAGAATGGGA AGAAGAATAA TAATGGGTTT 
    TGGACGAAGT TGCTTCATTT GAAGGGAAAG AAGGATCAGG TTTTGATGCG TTCTGGTGTC 
    TCTATGAGTG AAAGGTTGTA TAATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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