ORF » Species Summary » Populus trichocarpa » LOC7461279 cDNA ORF clone

LOC7461279 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7461279 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7461279 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa33873 XM_002323730.3
Latest version!		 Populus trichocarpa acetylornithine aminotransferase, mitochondrial (LOC7461279), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa33873 XM_002323730.2 Populus trichocarpa hypothetical protein (POPTR_0017s08060g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7461279 ( XM_002323730.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002323766.2 Populus trichocarpa hypothetical protein (POPTR_0017s08060g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa33873
    Clone ID Related Accession (Same CDS sequence) XM_002323730.2 , XM_002323730.3
    Accession Version XM_002323730.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1356bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008483). On Dec 16, 2013 this sequence version replaced XM_002323730.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGTTCTC TCCAGCACTT CCTCAACAGT CCGATCTCGG TCCCCTTTTC TCCAAATCTC 
    AATCATCGCC GTTCTTTTTT CTTACGAGCA TGCCTTAACC TGGACGTGCA TGCACCGGAT 
    TCAGTGAAAC CCAAAACCCA TTTGAAAAGT CGAGAGGTTA TGGAGATGGA AGGGAAGGTG 
    TTAGTTGGGA CATATGCAAG AAACCCAGTT GTGATTTCGA GTGGAAAAGG TTGTAAATTG 
    TATGATCCCG AAGGGAGAGA GTACTTGGAT TGTACTTCTG GTATTGCTGT TAATGCTCTT 
    GGTCATGGGG ATCCTGATTG GGTCAAAGCT GTTGTTGAGC AAGCTAATTT GCTCACTCAT 
    GTCAGCAATG TTTTCTATTC AGTTCCTCAG GTAGAGCTTG CTAAACGTCT TGTGGCTTGT 
    TCATTTGCCG ATCGTGTTTT TTTCACGAAC TCTGGTACGG AAGCAAATGA AGCTGCTATA 
    AAGTTTGCAC GGAAGTATCA ACGATTTACA AATCCTGAGA AGCAGCAAGC GACAGAGTTT 
    ATTTCATTTA GTAATAGCTT CCATGGGAGG ACAATGGGGG CTCTGGCGTT GACAAGCAAG 
    GAGCAGTATC GATTTCCTTT TGAGCCTGTC ATGCCTGGAG TTAATTTCCT GGAATATGGT 
    GACGTACAGG CTGCAACAGA ACTGATTAAG TCTGGCAGGA TTGCTGCTGT ATTTGTAGAA 
    CCTATACAGG GTGAAGGTGG TATTTATAGT GCAACAAAGG AATTCTTACA GTCCTTACGT 
    AGTGCTTGTG ATGATGCTGG GTCTCTCCTG GTTTTTGACG AGGTCCAATG TGGCTTAGGC 
    CGAACTGGTT ATCTTTGGGC ACACGAGGTA TATGGTGTGG TCCCAGATAT AATGACACTT 
    GCCAAGCCTC TCGCAGGAGG TCTGCCTATA GGAGCTGCAT TGGTGAGTGA AAAAGTTGCA 
    GCTGCCATAA AATATGGAGA CCACGGGAGC ACTTTTGCTG GTGGACCTCT TGTCTGTAAC 
    GCTGCCATTG CTGTTTTAGA TAAAATATCA AAGCCAGGTT TCTTGGCCAG TGTCTCTGAG 
    AAAGGTCAAT ACTTCAAAGA ACTTTTAATT CACAAACTAG GAGGAAATTC ACATGTGAGA 
    GAAGTACGAG GTTTGGGACT TATAATTGGG ATAGAGCTGG ATGTATCCGC TTCACCCCTC 
    GTAGATGCCT GCCGAGATTC CAGTCTTCTA ATATTAACTG CTGGAAAAGG AAATGTTGTC 
    AGGCTGGTCC CCCCGTTGAT CATCTCAGAA GAAGAACTGG AGCGTGCTGC TGAGATTATA 
    CTGGAATGTC TTCCAGCACT TGACAAGACT AGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002323766.2
    CDS258..1613
    Translation

    Target ORF information:

    RefSeq Version XM_002323730.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0017s08060g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002323730.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGTTCTC TCCAGCACTT CCTCAACAGT CCGATCTCGG TCCCCTTTTC TCCAAATCTC 
    AATCATCGCC GTTCTTTTTT CTTACGAGCA TGCCTTAACC TGGACGTGCA TGCACCGGAT 
    TCAGTGAAAC CCAAAACCCA TTTGAAAAGT CGAGAGGTTA TGGAGATGGA AGGGAAGGTG 
    TTAGTTGGGA CATATGCAAG AAACCCAGTT GTGATTTCGA GTGGAAAAGG TTGTAAATTG 
    TATGATCCCG AAGGGAGAGA GTACTTGGAT TGTACTTCTG GTATTGCTGT TAATGCTCTT 
    GGTCATGGGG ATCCTGATTG GGTCAAAGCT GTTGTTGAGC AAGCTAATTT GCTCACTCAT 
    GTCAGCAATG TTTTCTATTC AGTTCCTCAG GTAGAGCTTG CTAAACGTCT TGTGGCTTGT 
    TCATTTGCCG ATCGTGTTTT TTTCACGAAC TCTGGTACGG AAGCAAATGA AGCTGCTATA 
    AAGTTTGCAC GGAAGTATCA ACGATTTACA AATCCTGAGA AGCAGCAAGC GACAGAGTTT 
    ATTTCATTTA GTAATAGCTT CCATGGGAGG ACAATGGGGG CTCTGGCGTT GACAAGCAAG 
    GAGCAGTATC GATTTCCTTT TGAGCCTGTC ATGCCTGGAG TTAATTTCCT GGAATATGGT 
    GACGTACAGG CTGCAACAGA ACTGATTAAG TCTGGCAGGA TTGCTGCTGT ATTTGTAGAA 
    CCTATACAGG GTGAAGGTGG TATTTATAGT GCAACAAAGG AATTCTTACA GTCCTTACGT 
    AGTGCTTGTG ATGATGCTGG GTCTCTCCTG GTTTTTGACG AGGTCCAATG TGGCTTAGGC 
    CGAACTGGTT ATCTTTGGGC ACACGAGGTA TATGGTGTGG TCCCAGATAT AATGACACTT 
    GCCAAGCCTC TCGCAGGAGG TCTGCCTATA GGAGCTGCAT TGGTGAGTGA AAAAGTTGCA 
    GCTGCCATAA AATATGGAGA CCACGGGAGC ACTTTTGCTG GTGGACCTCT TGTCTGTAAC 
    GCTGCCATTG CTGTTTTAGA TAAAATATCA AAGCCAGGTT TCTTGGCCAG TGTCTCTGAG 
    AAAGGTCAAT ACTTCAAAGA ACTTTTAATT CACAAACTAG GAGGAAATTC ACATGTGAGA 
    GAAGTACGAG GTTTGGGACT TATAATTGGG ATAGAGCTGG ATGTATCCGC TTCACCCCTC 
    GTAGATGCCT GCCGAGATTC CAGTCTTCTA ATATTAACTG CTGGAAAAGG AAATGTTGTC 
    AGGCTGGTCC CCCCGTTGAT CATCTCAGAA GAAGAACTGG AGCGTGCTGC TGAGATTATA 
    CTGGAATGTC TTCCAGCACT TGACAAGACT AGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7461279 ( XM_002323730.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002323766.2 Populus trichocarpa acetylornithine aminotransferase, mitochondrial (LOC7461279), mRNA.
    Price & Availability↑
    CloneID OPa33873
    Clone ID Related Accession (Same CDS sequence) XM_002323730.2 , XM_002323730.3
    Accession Version XM_002323730.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1356bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product acetylornithine aminotransferase, mitochondrial
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037301.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002323730.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGTTCTC TCCAGCACTT CCTCAACAGT CCGATCTCGG TCCCCTTTTC TCCAAATCTC 
    AATCATCGCC GTTCTTTTTT CTTACGAGCA TGCCTTAACC TGGACGTGCA TGCACCGGAT 
    TCAGTGAAAC CCAAAACCCA TTTGAAAAGT CGAGAGGTTA TGGAGATGGA AGGGAAGGTG 
    TTAGTTGGGA CATATGCAAG AAACCCAGTT GTGATTTCGA GTGGAAAAGG TTGTAAATTG 
    TATGATCCCG AAGGGAGAGA GTACTTGGAT TGTACTTCTG GTATTGCTGT TAATGCTCTT 
    GGTCATGGGG ATCCTGATTG GGTCAAAGCT GTTGTTGAGC AAGCTAATTT GCTCACTCAT 
    GTCAGCAATG TTTTCTATTC AGTTCCTCAG GTAGAGCTTG CTAAACGTCT TGTGGCTTGT 
    TCATTTGCCG ATCGTGTTTT TTTCACGAAC TCTGGTACGG AAGCAAATGA AGCTGCTATA 
    AAGTTTGCAC GGAAGTATCA ACGATTTACA AATCCTGAGA AGCAGCAAGC GACAGAGTTT 
    ATTTCATTTA GTAATAGCTT CCATGGGAGG ACAATGGGGG CTCTGGCGTT GACAAGCAAG 
    GAGCAGTATC GATTTCCTTT TGAGCCTGTC ATGCCTGGAG TTAATTTCCT GGAATATGGT 
    GACGTACAGG CTGCAACAGA ACTGATTAAG TCTGGCAGGA TTGCTGCTGT ATTTGTAGAA 
    CCTATACAGG GTGAAGGTGG TATTTATAGT GCAACAAAGG AATTCTTACA GTCCTTACGT 
    AGTGCTTGTG ATGATGCTGG GTCTCTCCTG GTTTTTGACG AGGTCCAATG TGGCTTAGGC 
    CGAACTGGTT ATCTTTGGGC ACACGAGGTA TATGGTGTGG TCCCAGATAT AATGACACTT 
    GCCAAGCCTC TCGCAGGAGG TCTGCCTATA GGAGCTGCAT TGGTGAGTGA AAAAGTTGCA 
    GCTGCCATAA AATATGGAGA CCACGGGAGC ACTTTTGCTG GTGGACCTCT TGTCTGTAAC 
    GCTGCCATTG CTGTTTTAGA TAAAATATCA AAGCCAGGTT TCTTGGCCAG TGTCTCTGAG 
    AAAGGTCAAT ACTTCAAAGA ACTTTTAATT CACAAACTAG GAGGAAATTC ACATGTGAGA 
    GAAGTACGAG GTTTGGGACT TATAATTGGG ATAGAGCTGG ATGTATCCGC TTCACCCCTC 
    GTAGATGCCT GCCGAGATTC CAGTCTTCTA ATATTAACTG CTGGAAAAGG AAATGTTGTC 
    AGGCTGGTCC CCCCGTTGAT CATCTCAGAA GAAGAACTGG AGCGTGCTGC TGAGATTATA 
    CTGGAATGTC TTCCAGCACT TGACAAGACT AGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002323766.2
    CDS303..1658
    Translation

    Target ORF information:

    RefSeq Version XM_002323730.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa acetylornithine aminotransferase, mitochondrial (LOC7461279), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002323730.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGTTCTC TCCAGCACTT CCTCAACAGT CCGATCTCGG TCCCCTTTTC TCCAAATCTC 
    AATCATCGCC GTTCTTTTTT CTTACGAGCA TGCCTTAACC TGGACGTGCA TGCACCGGAT 
    TCAGTGAAAC CCAAAACCCA TTTGAAAAGT CGAGAGGTTA TGGAGATGGA AGGGAAGGTG 
    TTAGTTGGGA CATATGCAAG AAACCCAGTT GTGATTTCGA GTGGAAAAGG TTGTAAATTG 
    TATGATCCCG AAGGGAGAGA GTACTTGGAT TGTACTTCTG GTATTGCTGT TAATGCTCTT 
    GGTCATGGGG ATCCTGATTG GGTCAAAGCT GTTGTTGAGC AAGCTAATTT GCTCACTCAT 
    GTCAGCAATG TTTTCTATTC AGTTCCTCAG GTAGAGCTTG CTAAACGTCT TGTGGCTTGT 
    TCATTTGCCG ATCGTGTTTT TTTCACGAAC TCTGGTACGG AAGCAAATGA AGCTGCTATA 
    AAGTTTGCAC GGAAGTATCA ACGATTTACA AATCCTGAGA AGCAGCAAGC GACAGAGTTT 
    ATTTCATTTA GTAATAGCTT CCATGGGAGG ACAATGGGGG CTCTGGCGTT GACAAGCAAG 
    GAGCAGTATC GATTTCCTTT TGAGCCTGTC ATGCCTGGAG TTAATTTCCT GGAATATGGT 
    GACGTACAGG CTGCAACAGA ACTGATTAAG TCTGGCAGGA TTGCTGCTGT ATTTGTAGAA 
    CCTATACAGG GTGAAGGTGG TATTTATAGT GCAACAAAGG AATTCTTACA GTCCTTACGT 
    AGTGCTTGTG ATGATGCTGG GTCTCTCCTG GTTTTTGACG AGGTCCAATG TGGCTTAGGC 
    CGAACTGGTT ATCTTTGGGC ACACGAGGTA TATGGTGTGG TCCCAGATAT AATGACACTT 
    GCCAAGCCTC TCGCAGGAGG TCTGCCTATA GGAGCTGCAT TGGTGAGTGA AAAAGTTGCA 
    GCTGCCATAA AATATGGAGA CCACGGGAGC ACTTTTGCTG GTGGACCTCT TGTCTGTAAC 
    GCTGCCATTG CTGTTTTAGA TAAAATATCA AAGCCAGGTT TCTTGGCCAG TGTCTCTGAG 
    AAAGGTCAAT ACTTCAAAGA ACTTTTAATT CACAAACTAG GAGGAAATTC ACATGTGAGA 
    GAAGTACGAG GTTTGGGACT TATAATTGGG ATAGAGCTGG ATGTATCCGC TTCACCCCTC 
    GTAGATGCCT GCCGAGATTC CAGTCTTCTA ATATTAACTG CTGGAAAAGG AAATGTTGTC 
    AGGCTGGTCC CCCCGTTGAT CATCTCAGAA GAAGAACTGG AGCGTGCTGC TGAGATTATA 
    CTGGAATGTC TTCCAGCACT TGACAAGACT AGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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