Gene Symbol | LOC7454468 |
Entrez Gene ID | 7454468 |
Full Name | arginine/serine-rich splicing factor RSP41 family protein |
Synonyms | POPTRDRAFT_253698 |
Gene Type | protein-coding |
Organism | Populus trichocarpa(black cottonwood) |
ORF » Species Summary » Populus trichocarpa » LOC7454468 cDNA ORF clone
Gene Symbol | LOC7454468 |
Entrez Gene ID | 7454468 |
Full Name | arginine/serine-rich splicing factor RSP41 family protein |
Synonyms | POPTRDRAFT_253698 |
Gene Type | protein-coding |
Organism | Populus trichocarpa(black cottonwood) |
mRNA | Protein | Name |
---|---|---|
XM_024586591.1 | XP_024442359.1 | serine/arginine-rich splicing factor RS40 isoform X2 |
XM_006374580.1 | XP_006374642.1 | hypothetical protein |
XM_006374580.2 | XP_006374642.1 | serine/arginine-rich splicing factor RS40 isoform X1 |
XM_002322400.2 | XP_002322436.2 | arginine/serine-rich splicing factor RSP41 family protein |
XM_024586592.1 | XP_024442360.1 | serine/arginine-rich splicing factor RS40 isoform X3 |
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Déjardin A, Depamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjärvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leplé JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson DR, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouzé P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D
Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC7454468 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7454468 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPa31120 | |
Clone ID Related Accession (Same CDS sequence) | XM_006374580.1 , XM_006374580.2 | |
Accession Version | XM_006374580.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1206bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1388332800000 | |
Organism | Populus trichocarpa(Populus balsamifera subsp. trichocarpa) | |
Product | hypothetical protein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008481). |
1 | ATGAGGCCAA TCTTTTGTGG GAACTTTGAG TATGATGCAA GACAGACTGA GCTGGAACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006374642.1 |
CDS | 127..1332 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGGCCAA TCTTTTGTGG GAACTTTGAG TATGATGCAA GACAGACTGA GCTGGAACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPa31120 | |
Clone ID Related Accession (Same CDS sequence) | XM_006374580.1 , XM_006374580.2 | |
Accession Version | XM_006374580.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1206bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1523116800000 | |
Organism | Populus trichocarpa(black cottonwood) | |
Product | serine/arginine-rich splicing factor RS40 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037299.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006374580.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGCCAA TCTTTTGTGG GAACTTTGAG TATGATGCAA GACAGACTGA GCTGGAACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006374642.1 |
CDS | 161..1366 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGCCAA TCTTTTGTGG GAACTTTGAG TATGATGCAA GACAGACTGA GCTGGAACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPa31121 | |
Clone ID Related Accession (Same CDS sequence) | XM_002322400.2 | |
Accession Version | XM_002322400.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1056bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1388332800000 | |
Organism | Populus trichocarpa(Populus balsamifera subsp. trichocarpa) | |
Product | arginine/serine-rich splicing factor RSP41 family protein | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008481). On Dec 16, 2013 this sequence version replaced XM_002322400.1. COMPLETENESS: incomplete on the 3' end. |
1 | ATGAGGCCAA TCTTTTGTGG GAACTTTGAG TATGATGCAA GACAGACTGA GCTGGAACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002322436.2 |
CDS | 127..1182 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGCCAA TCTTTTGTGG GAACTTTGAG TATGATGCAA GACAGACTGA GCTGGAACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPa444523 | |
Clone ID Related Accession (Same CDS sequence) | XM_024586591.1 | |
Accession Version | XM_024586591.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1167bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1523116800000 | |
Organism | Populus trichocarpa(black cottonwood) | |
Product | serine/arginine-rich splicing factor RS40 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037299.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGCCAA TCTTTTGTGG GAACTTTGAG TATGATGCAA GACAGACTGA GCTGGAACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024442359.1 |
CDS | 161..1327 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGGCCAA TCTTTTGTGG GAACTTTGAG TATGATGCAA GACAGACTGA GCTGGAACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPa444524 | |
Clone ID Related Accession (Same CDS sequence) | XM_024586592.1 | |
Accession Version | XM_024586592.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1083bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1523116800000 | |
Organism | Populus trichocarpa(black cottonwood) | |
Product | serine/arginine-rich splicing factor RS40 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037299.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAGATG AGAGAGATGC TGAGGATGCT ATTCGAGGAC TTGATCGTGT AGAATTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024442360.1 |
CDS | 461..1543 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAGATG AGAGAGATGC TGAGGATGCT ATTCGAGGAC TTGATCGTGT AGAATTTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). |