ORF » Species Summary » Populus trichocarpa » POPTR_0363s00200g cDNA ORF clone

POPTR_0363s00200g cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following POPTR_0363s00200g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0363s00200g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa424077 XM_024594691.1
Latest version!		 Populus trichocarpa U1 small nuclear ribonucleoprotein A (LOC18109788), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa424078 XM_024594692.1
Latest version!		 Populus trichocarpa U1 small nuclear ribonucleoprotein A (LOC18109788), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0363s00200g ( XM_024594691.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024450459.1 Populus trichocarpa U1 small nuclear ribonucleoprotein A (LOC18109788), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa424077
    Clone ID Related Accession (Same CDS sequence) XM_024594691.1
    Accession Version XM_024594691.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 780bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product U1 small nuclear ribonucleoprotein A isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGCATTGC TGGAGAGAAA AGACATGGCT GATGTGAATA ACAATATCAA TAATAATAGT 
    AGCACAGGTA CTGAAGTCTC TTCGAACATG ACTATTTACA TCAATAACCT CAACGAAAAA 
    ATCAAAATCG ATGAGTTGAA GAAAGCTCTG CACGCTGTGT TCTCGCAATT CGGGAAGATA 
    CTGGAGATAT TGGCATTCAA GACATTGAAA CACAAAGGGC AAGCTTGGGT TGTTTTTGAG 
    GATGTTCAGT CTGCCTCTAA TGCCATGAGG CAAATGCAGT CTTTCCCCTT TTATGATAAG 
    CCCATGAGAA TACAATATGC AAAAACTAAA TCAGATATTG TAGCAAAGGC TGATGGTACT 
    TTTGTTCCTC GGGAAAAACG AAGGAGGCAT GAGGAAAAAG GGAAAAAGAA GAAAGATCAA 
    CATGATACTA ATCAAGTGGG AGTGGGTCTG ACTCCTGCAT ATGGCGGCGC CTACGGGACA 
    ACACCTCCTC TTTCTCAAAT ACCCTATCTA GGTGGTGTGA AATCTATGGT CCCTGAGGCT 
    CCAGCTCCTC CAAATAACAT TCTGTTTATT CAAAATCTTC CCAATGAGAC TACTACAATG 
    ATGCTGCAAA TGTTATTCCA GCAGTACGCT GGTTTTAAGG AGGTCAGGAT GGTGGAAACA 
    AAGCCTGGGA TTGCCTTTGT GGAGTACGGA GATGAGATGC AATCAACAGT CGCTATGCAT 
    GCACTTCAGG GTTTCAAGTT ACAGCAGAAT TCAATGTTAA TTACCTATGC CAAGAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450459.1
    CDS101..880
    Translation

    Target ORF information:

    RefSeq Version XM_024594691.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa U1 small nuclear ribonucleoprotein A (LOC18109788), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024594691.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGCATTGC TGGAGAGAAA AGACATGGCT GATGTGAATA ACAATATCAA TAATAATAGT 
    AGCACAGGTA CTGAAGTCTC TTCGAACATG ACTATTTACA TCAATAACCT CAACGAAAAA 
    ATCAAAATCG ATGAGTTGAA GAAAGCTCTG CACGCTGTGT TCTCGCAATT CGGGAAGATA 
    CTGGAGATAT TGGCATTCAA GACATTGAAA CACAAAGGGC AAGCTTGGGT TGTTTTTGAG 
    GATGTTCAGT CTGCCTCTAA TGCCATGAGG CAAATGCAGT CTTTCCCCTT TTATGATAAG 
    CCCATGAGAA TACAATATGC AAAAACTAAA TCAGATATTG TAGCAAAGGC TGATGGTACT 
    TTTGTTCCTC GGGAAAAACG AAGGAGGCAT GAGGAAAAAG GGAAAAAGAA GAAAGATCAA 
    CATGATACTA ATCAAGTGGG AGTGGGTCTG ACTCCTGCAT ATGGCGGCGC CTACGGGACA 
    ACACCTCCTC TTTCTCAAAT ACCCTATCTA GGTGGTGTGA AATCTATGGT CCCTGAGGCT 
    CCAGCTCCTC CAAATAACAT TCTGTTTATT CAAAATCTTC CCAATGAGAC TACTACAATG 
    ATGCTGCAAA TGTTATTCCA GCAGTACGCT GGTTTTAAGG AGGTCAGGAT GGTGGAAACA 
    AAGCCTGGGA TTGCCTTTGT GGAGTACGGA GATGAGATGC AATCAACAGT CGCTATGCAT 
    GCACTTCAGG GTTTCAAGTT ACAGCAGAAT TCAATGTTAA TTACCTATGC CAAGAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0363s00200g ( XM_024594692.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024450460.1 Populus trichocarpa U1 small nuclear ribonucleoprotein A (LOC18109788), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa424078
    Clone ID Related Accession (Same CDS sequence) XM_024594692.1
    Accession Version XM_024594692.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 681bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product U1 small nuclear ribonucleoprotein A isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGTCTGATT TGAAAACCAA AAAAAAAAAA AAAGAGTTGA AGAAAGCTCT GCACGCTGTG 
    TTCTCGCAAT TCGGGAAGAT ACTGGAGATA TTGGCATTCA AGACATTGAA ACACAAAGGG 
    CAAGCTTGGG TTGTTTTTGA GGATGTTCAG TCTGCCTCTA ATGCCATGAG GCAAATGCAG 
    TCTTTCCCCT TTTATGATAA GCCCATGAGA ATACAATATG CAAAAACTAA ATCAGATATT 
    GTAGCAAAGG CTGATGGTAC TTTTGTTCCT CGGGAAAAAC GAAGGAGGCA TGAGGAAAAA 
    GGGAAAAAGA AGAAAGATCA ACATGATACT AATCAAGTGG GAGTGGGTCT GACTCCTGCA 
    TATGGCGGCG CCTACGGGAC AACACCTCCT CTTTCTCAAA TACCCTATCT AGGTGGTGTG 
    AAATCTATGG TCCCTGAGGC TCCAGCTCCT CCAAATAACA TTCTGTTTAT TCAAAATCTT 
    CCCAATGAGA CTACTACAAT GATGCTGCAA ATGTTATTCC AGCAGTACGC TGGTTTTAAG 
    GAGGTCAGGA TGGTGGAAAC AAAGCCTGGG ATTGCCTTTG TGGAGTACGG AGATGAGATG 
    CAATCAACAG TCGCTATGCA TGCACTTCAG GGTTTCAAGT TACAGCAGAA TTCAATGTTA 
    ATTACCTATG CCAAGAAATA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450460.1
    CDS156..836
    Translation

    Target ORF information:

    RefSeq Version XM_024594692.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa U1 small nuclear ribonucleoprotein A (LOC18109788), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024594692.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGTCTGATT TGAAAACCAA AAAAAAAAAA AAAGAGTTGA AGAAAGCTCT GCACGCTGTG 
    TTCTCGCAAT TCGGGAAGAT ACTGGAGATA TTGGCATTCA AGACATTGAA ACACAAAGGG 
    CAAGCTTGGG TTGTTTTTGA GGATGTTCAG TCTGCCTCTA ATGCCATGAG GCAAATGCAG 
    TCTTTCCCCT TTTATGATAA GCCCATGAGA ATACAATATG CAAAAACTAA ATCAGATATT 
    GTAGCAAAGG CTGATGGTAC TTTTGTTCCT CGGGAAAAAC GAAGGAGGCA TGAGGAAAAA 
    GGGAAAAAGA AGAAAGATCA ACATGATACT AATCAAGTGG GAGTGGGTCT GACTCCTGCA 
    TATGGCGGCG CCTACGGGAC AACACCTCCT CTTTCTCAAA TACCCTATCT AGGTGGTGTG 
    AAATCTATGG TCCCTGAGGC TCCAGCTCCT CCAAATAACA TTCTGTTTAT TCAAAATCTT 
    CCCAATGAGA CTACTACAAT GATGCTGCAA ATGTTATTCC AGCAGTACGC TGGTTTTAAG 
    GAGGTCAGGA TGGTGGAAAC AAAGCCTGGG ATTGCCTTTG TGGAGTACGG AGATGAGATG 
    CAATCAACAG TCGCTATGCA TGCACTTCAG GGTTTCAAGT TACAGCAGAA TTCAATGTTA 
    ATTACCTATG CCAAGAAATA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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