ORF » Species Summary » Populus trichocarpa » POPTR_0017s023401g cDNA ORF clone

POPTR_0017s023401g cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following POPTR_0017s023401g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0017s023401g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa446937 XM_006372450.2
Latest version!		 Populus trichocarpa NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (LOC18106581), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0017s023401g ( XM_006372450.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006372512.2 Populus trichocarpa NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (LOC18106581), mRNA.
    Price & Availability↑
    CloneID OPa446937
    Clone ID Related Accession (Same CDS sequence) XM_006372450.2
    Accession Version XM_006372450.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2220bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037301.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006372450.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGGGGTTAG GCTTATTAGC TTCAAGGCTC ATAAGACCTC AAACTGCAGC CCGAACCCTT 
    CTTCTACGCT CCATCGTGAC CAAACCGGAG CTTCAATCAC CTGAACCCGC AACCGCCCCA 
    CAACCCGACC CAACACCTGG TCTTCCGCCG CGAACACCAT TGGGTGGTGC CCGAGTTCAC 
    TTTCCGAACC CGGAAGATGC AATCGAAGTG TTTGTTGATG GGTACCCAGT GAAAATCCCG 
    AAAGGGATGA CTGTGTTACA AGCTTGTGAA GTTGCTGGTG TTGATATTCC GAGGTTTTGT 
    TATCATAGTC GGTTGTCGAT TGCTGGGAAC TGTCGTATGT GTCTTGTGGA AGTGGAGAAG 
    AGTCCTAAGC CTGTTGCTTC TTGCGCTATG CCTGCTCTTC CTGGAATGAA GATTAAGACA 
    GACACACCTG TGGCAAAGAA AGCACGAGAA GGGGTTATGG AATTTTTGCT GATGAATCAC 
    CCATTGGATT GTCCAATTTG TGATCAAGGT GGAGAGTGTG ATCTTCAGGA TCAGTCTATG 
    GCATTTGGGT CTGATCGTGG CAGGTTCACT GAAGTGAAGC GATCAGTTGT CGATAAGAAT 
    CTTGGCCCTT TGGTGAAGAC TGTGATGACT CGTTGCATTC AGTGTACAAG GTGTGTGAGG 
    TTTGCAACAG AAGTTGCTGG GGTTCAGGAT CTTGGCATGT TAGGTCGTGG CAGTGGAGAA 
    GAAATTGGAA CTTATGTTGA AAAACTTATG ACAAGTGAAC TATCTGGAAA TGTGATAGAT 
    ATCTGTCCAG TGGGAGCCCT TACCTCAAAA CCTTTTGCAT TTAAAGCTCG AAATTGGGAG 
    TTGAAAGGTA CAGAGACCAT TGATGTCTCT GATGCAGTTG GATCCAACAT CCGGATTGAT 
    AGCAGAGGTC CAGAGGTCCT GCGCATCACT CCACGGTTAA ATGAGGATAT AAATGAAGAA 
    TGGATATCAG ACAAGACTCG GTTTTGCTAT GATGGTCTTA AGAGGCAGAG GCTAAATGAT 
    CCTATGATTC GTGGCACAGA TGGGCGCTTC AAGGTCGTGA GCTGGCATGA TGCCTTAGCT 
    GTGGTTGCTG AGATTGCCCA TCAAGTTAAA CCAGAGGAAA TAGTGGGGAT TGCTGGTAAA 
    CTATCTGATG CTGAATCCAT GATGGCGCTG AAAGATTTCT TAAACAAAAT GGGGTCAAAT 
    AATGTGTGGT GTGAAGGAAA TGGACCTAGC CCAAATGCTG ATCTTCGATC TGGATATATT 
    ATGAACTGTG GCATTAGTGG TCTTGAGAAT GCAGATGTTT TCCTCTTGGT TGGCACCCAG 
    CCAAGGGTAG AAGCTGCCAT GGTTAATGCC AGAATCCGCA AGACAGTTCG AGGAAGCAAT 
    GCTAAGGTTG CTTATGTTGG CCCTCCGACA GAATTCAACT ATGATTGTGA GAATCTAGGC 
    ACTGGTCCTG AAACTCTTAC TGAAATTGCA GAGGGTCGCC ACCCATTTTG CTCAACACTT 
    TCAAATGCCA AAAACCCTGC CATCGTTGTT GGTGCTGGAC TCTTTGAGAG ATCAGACAAG 
    GATGCAATTT TCTCTGCTGT TGAAACCATT GCAAAAAATG GAAATGTTGC AAGACCTGAT 
    TGGAATGGTT TCAACGTGTT GCTTCTCAAT GCTGCCCAAG CTGCAGCACT TGACCTTGGA 
    CTTGTGCCAG AATCTATCCA AAGTATTGAG AGCGCCAAAT TTGTGTATCT GATGGGTGCT 
    GATGATGTGG ATTTGGAAAA GCTTCCAAGT GATGCCTTTG TTGTTTATCA GGGGCACCAT 
    GGGGACCGAG GCGTGTACCG TGCCAATGTA ATTCTCCCAG CATCAGCATT CAGTGAGAAA 
    GAAGGGACAT ACGAAAACAC AGAAGGGTGT GCGCAGCAGA CTTTGCCTGC AGTTCCAACA 
    GTTGGTGATT CCAGGGATGA TTGGAAGATA ATTCGTGCTC TTTCTGAGGT AGCAGGGGTG 
    CAGTTGCCCT ATGATACAAT TGGGGCTGTC CGATCTCGGA TTAGTACTGT TGCACCAAAC 
    CTCTTGAGCA TGGACGAGAG AGAGCCAGCT ACCTTTTGGG CTTCATTGAA GCCTGAGGTT 
    AATCAGAAGA TGAATTCAAC TCCTTTCCAG GCTGCTATAG AGAATTTCTA TATGACTGAT 
    TCTATTACCA GGGCATCAAA GATAATGGCT CAGTGCAGTT CACTGCTGCT AAAGAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006372512.2
    CDS191..2410
    Translation

    Target ORF information:

    RefSeq Version XM_006372450.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (LOC18106581), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006372450.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGGGGTTAG GCTTATTAGC TTCAAGGCTC ATAAGACCTC AAACTGCAGC CCGAACCCTT 
    CTTCTACGCT CCATCGTGAC CAAACCGGAG CTTCAATCAC CTGAACCCGC AACCGCCCCA 
    CAACCCGACC CAACACCTGG TCTTCCGCCG CGAACACCAT TGGGTGGTGC CCGAGTTCAC 
    TTTCCGAACC CGGAAGATGC AATCGAAGTG TTTGTTGATG GGTACCCAGT GAAAATCCCG 
    AAAGGGATGA CTGTGTTACA AGCTTGTGAA GTTGCTGGTG TTGATATTCC GAGGTTTTGT 
    TATCATAGTC GGTTGTCGAT TGCTGGGAAC TGTCGTATGT GTCTTGTGGA AGTGGAGAAG 
    AGTCCTAAGC CTGTTGCTTC TTGCGCTATG CCTGCTCTTC CTGGAATGAA GATTAAGACA 
    GACACACCTG TGGCAAAGAA AGCACGAGAA GGGGTTATGG AATTTTTGCT GATGAATCAC 
    CCATTGGATT GTCCAATTTG TGATCAAGGT GGAGAGTGTG ATCTTCAGGA TCAGTCTATG 
    GCATTTGGGT CTGATCGTGG CAGGTTCACT GAAGTGAAGC GATCAGTTGT CGATAAGAAT 
    CTTGGCCCTT TGGTGAAGAC TGTGATGACT CGTTGCATTC AGTGTACAAG GTGTGTGAGG 
    TTTGCAACAG AAGTTGCTGG GGTTCAGGAT CTTGGCATGT TAGGTCGTGG CAGTGGAGAA 
    GAAATTGGAA CTTATGTTGA AAAACTTATG ACAAGTGAAC TATCTGGAAA TGTGATAGAT 
    ATCTGTCCAG TGGGAGCCCT TACCTCAAAA CCTTTTGCAT TTAAAGCTCG AAATTGGGAG 
    TTGAAAGGTA CAGAGACCAT TGATGTCTCT GATGCAGTTG GATCCAACAT CCGGATTGAT 
    AGCAGAGGTC CAGAGGTCCT GCGCATCACT CCACGGTTAA ATGAGGATAT AAATGAAGAA 
    TGGATATCAG ACAAGACTCG GTTTTGCTAT GATGGTCTTA AGAGGCAGAG GCTAAATGAT 
    CCTATGATTC GTGGCACAGA TGGGCGCTTC AAGGTCGTGA GCTGGCATGA TGCCTTAGCT 
    GTGGTTGCTG AGATTGCCCA TCAAGTTAAA CCAGAGGAAA TAGTGGGGAT TGCTGGTAAA 
    CTATCTGATG CTGAATCCAT GATGGCGCTG AAAGATTTCT TAAACAAAAT GGGGTCAAAT 
    AATGTGTGGT GTGAAGGAAA TGGACCTAGC CCAAATGCTG ATCTTCGATC TGGATATATT 
    ATGAACTGTG GCATTAGTGG TCTTGAGAAT GCAGATGTTT TCCTCTTGGT TGGCACCCAG 
    CCAAGGGTAG AAGCTGCCAT GGTTAATGCC AGAATCCGCA AGACAGTTCG AGGAAGCAAT 
    GCTAAGGTTG CTTATGTTGG CCCTCCGACA GAATTCAACT ATGATTGTGA GAATCTAGGC 
    ACTGGTCCTG AAACTCTTAC TGAAATTGCA GAGGGTCGCC ACCCATTTTG CTCAACACTT 
    TCAAATGCCA AAAACCCTGC CATCGTTGTT GGTGCTGGAC TCTTTGAGAG ATCAGACAAG 
    GATGCAATTT TCTCTGCTGT TGAAACCATT GCAAAAAATG GAAATGTTGC AAGACCTGAT 
    TGGAATGGTT TCAACGTGTT GCTTCTCAAT GCTGCCCAAG CTGCAGCACT TGACCTTGGA 
    CTTGTGCCAG AATCTATCCA AAGTATTGAG AGCGCCAAAT TTGTGTATCT GATGGGTGCT 
    GATGATGTGG ATTTGGAAAA GCTTCCAAGT GATGCCTTTG TTGTTTATCA GGGGCACCAT 
    GGGGACCGAG GCGTGTACCG TGCCAATGTA ATTCTCCCAG CATCAGCATT CAGTGAGAAA 
    GAAGGGACAT ACGAAAACAC AGAAGGGTGT GCGCAGCAGA CTTTGCCTGC AGTTCCAACA 
    GTTGGTGATT CCAGGGATGA TTGGAAGATA ATTCGTGCTC TTTCTGAGGT AGCAGGGGTG 
    CAGTTGCCCT ATGATACAAT TGGGGCTGTC CGATCTCGGA TTAGTACTGT TGCACCAAAC 
    CTCTTGAGCA TGGACGAGAG AGAGCCAGCT ACCTTTTGGG CTTCATTGAA GCCTGAGGTT 
    AATCAGAAGA TGAATTCAAC TCCTTTCCAG GCTGCTATAG AGAATTTCTA TATGACTGAT 
    TCTATTACCA GGGCATCAAA GATAATGGCT CAGTGCAGTT CACTGCTGCT AAAGAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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