ORF » Species Summary » Populus trichocarpa » LOC18104015 cDNA ORF clone

LOC18104015 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18104015 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18104015 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa28487 XM_006375666.1
Latest version!		 Populus trichocarpa pre-mRNA splicing factor PRP38 family protein (POPTR_0013s01350g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa442306 XM_024584101.1
Latest version!		 Populus trichocarpa pre-mRNA-splicing factor 38 (LOC18104015), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18104015 ( XM_006375666.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006375728.1 Populus trichocarpa pre-mRNA splicing factor PRP38 family protein (POPTR_0013s01350g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa28487
    Clone ID Related Accession (Same CDS sequence) XM_006375666.1
    Accession Version XM_006375666.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 975bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product pre-mRNA splicing factor PRP38 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGCGAATC GAACAGATCC AACAGCGAAG AACATAAGAG GGACAAACCC ACAAAACCTA 
    GTAGAGAAAA TCCTGCGGTC CAAAATCTAT CAACACACGT ACTGGAAAGA ACAATGTTTT 
    GGGTTAACTG CAGAGACTTT GGTCGATAAA GCGATGGAAC TCGATCACTT AGGTGGTACC 
    TACGGTGGAA ATCGTAAGCC GACGCCGTTT ATGTGTTTGG TCATGAAGAT GTTGCAAATT 
    CAACCTGAGA AAGATATTGT TGTTGAATTC ATTAAAAACG AAGATTACAA ATATGTGCGT 
    GTGCTTGGTG CTTTTTATCT GCGACTTACT GGGACTGATA TTGATGTGTA TCGTTACCTA 
    GAGCCTTTGT ATAATGACTA TCGAAAGTTG AGGAAAAAAC TAACTGATGG GAAATTCGCA 
    TTGACACACA TGGATGAAGT TATCGACGAG CTCTTGACAA AAGATTATTC TTGTGACATT 
    GCTATGCCCC GTATTAAGAA AAGATGGACT CTTGAAACAC TTGCTGCACT TGAACCTAGA 
    AAGAGTGTGT TGGAAGATGA TTTTGAAGAA GAGGAAGAGC GAGAAGAGAA TGAGCAACTT 
    GAGGGATTAG ACAATGGTGC TGATGAACGG AGAGACAGGG ATAGAGATAG GGATCGCTAT 
    CGTTTGAGAG ATGAAAGAGA TTATGGTCAT GACCGGGAAC GAGAAAGAGA AAGGGAAGGC 
    AGGGAGCGTG AAAGACGAGA TAGGGACCGT GGCAGGCGGA GGAGTCATTC AAGGAGCCGA 
    AGTAGGAGTC GGGATCGTAA AAGACATGCC CACAGCAGTA GTCCTAAAAG GCGCGGAGAT 
    GGAGCAGAAG AGCCGAAGAA GAAGAAGAAG AAGGAAAAGA AGGAAAGGAA AGATGATGGT 
    ACGGACCACC CTGATCCGGA GATTGCTGAA GCTAATAAGC TCCGAGCAGC TCTTGGGTTG 
    AAACCACTTA AATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006375728.1
    CDS77..1051
    Translation

    Target ORF information:

    RefSeq Version XM_006375666.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa pre-mRNA splicing factor PRP38 family protein (POPTR_0013s01350g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006375666.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGCGAATC GAACAGATCC AACAGCGAAG AACATAAGAG GGACAAACCC ACAAAACCTA 
    GTAGAGAAAA TCCTGCGGTC CAAAATCTAT CAACACACGT ACTGGAAAGA ACAATGTTTT 
    GGGTTAACTG CAGAGACTTT GGTCGATAAA GCGATGGAAC TCGATCACTT AGGTGGTACC 
    TACGGTGGAA ATCGTAAGCC GACGCCGTTT ATGTGTTTGG TCATGAAGAT GTTGCAAATT 
    CAACCTGAGA AAGATATTGT TGTTGAATTC ATTAAAAACG AAGATTACAA ATATGTGCGT 
    GTGCTTGGTG CTTTTTATCT GCGACTTACT GGGACTGATA TTGATGTGTA TCGTTACCTA 
    GAGCCTTTGT ATAATGACTA TCGAAAGTTG AGGAAAAAAC TAACTGATGG GAAATTCGCA 
    TTGACACACA TGGATGAAGT TATCGACGAG CTCTTGACAA AAGATTATTC TTGTGACATT 
    GCTATGCCCC GTATTAAGAA AAGATGGACT CTTGAAACAC TTGCTGCACT TGAACCTAGA 
    AAGAGTGTGT TGGAAGATGA TTTTGAAGAA GAGGAAGAGC GAGAAGAGAA TGAGCAACTT 
    GAGGGATTAG ACAATGGTGC TGATGAACGG AGAGACAGGG ATAGAGATAG GGATCGCTAT 
    CGTTTGAGAG ATGAAAGAGA TTATGGTCAT GACCGGGAAC GAGAAAGAGA AAGGGAAGGC 
    AGGGAGCGTG AAAGACGAGA TAGGGACCGT GGCAGGCGGA GGAGTCATTC AAGGAGCCGA 
    AGTAGGAGTC GGGATCGTAA AAGACATGCC CACAGCAGTA GTCCTAAAAG GCGCGGAGAT 
    GGAGCAGAAG AGCCGAAGAA GAAGAAGAAG AAGGAAAAGA AGGAAAGGAA AGATGATGGT 
    ACGGACCACC CTGATCCGGA GATTGCTGAA GCTAATAAGC TCCGAGCAGC TCTTGGGTTG 
    AAACCACTTA AATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18104015 ( XM_024584101.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024439869.1 Populus trichocarpa pre-mRNA-splicing factor 38 (LOC18104015), mRNA.
    Price & Availability↑
    CloneID OPa442306
    Clone ID Related Accession (Same CDS sequence) XM_024584101.1
    Accession Version XM_024584101.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1128bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product pre-mRNA-splicing factor 38
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCGAATC GAACAGATCC AACAGCGAAG AACATAAGAG GGACAAACCC ACAAAACCTA 
    GTAGAGAAAA TCCTGCGGTC CAAAATCTAT CAACACACGT ACTGGAAAGA ACAATGTTTT 
    GGGTTAACTG CAGAGACTTT GGTCGATAAA GCGATGGAAC TCGATCACTT AGGTGGTACC 
    TACGGTGGAA ATCGTAAGCC GACGCCGTTT ATGTGTTTGG TCATGAAGAT GTTGCAAATT 
    CAACCTGAGA AAGATATTGT TGTTGAATTC ATTAAAAACG AAGATTACAA ATATGTGCGT 
    GTGCTTGGTG CTTTTTATCT GCGACTTACT GGGACTGATA TTGATGTGTA TCGTTACCTA 
    GAGCCTTTGT ATAATGACTA TCGAAAGTTG AGGAAAAAAC TAACTGATGG GAAATTCGCA 
    TTGACACACA TGGATGAAGT TATCGACGAG CTCTTGACAA AAGATTATTC TTGTGACATT 
    GCTATGCCCC GTATTAAGAA AAGATGGACT CTTGAAACAC TTGCTGCACT TGAACCTAGA 
    AAGAGTGTGT TGGAAGATGA TTTTGAAGAA GAGGAAGAGC GAGAAGAGAA TGAGCAACTT 
    GAGGGATTAG ACAATGGTGC TGATGAACGG GACTACTACC ATGAGAGAAG TCCTGCAAGG 
    GAAAGGGAAA GGGATCGGGA TCGGGATAGG GATAGAAGAC GTGATAGTCA CAGACATAGG 
    GATCGTGACT ATGATAGAGA TTATGACAAA GACTATGATA GGGAGCGTGG ACGTGGAAGA 
    GAGAGAGACA GGGACAGAGA TAGGGATCGC TATCGTTTGA GAGATGAAAG AGATTATGGT 
    CATGACCGGG AACGAGAAAG AGAAAGGGAA GGCAGGGAGC GTGAAAGACG AGATAGGGAC 
    CGTGGCAGGC GGAGGAGTCA TTCAAGGAGC CGAAGTAGGA GTCGGGATCG TAAAAGACAT 
    GCCCACAGCA GTAGTCCTAA AAGGCGTGGA GATGGAGCAG AAGAGCCGAA GAAGAAGAAG 
    AAGAAGGAAA AGAAGGAAAG GAAAGATGAT GGTACGGACC ACCCTGATCC GGAGATTGCT 
    GAAGCTAATA AGCTCCGAGC AGCCCTTGGG TTGAAACCAC TTAAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024439869.1
    CDS104..1231
    Translation

    Target ORF information:

    RefSeq Version XM_024584101.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa pre-mRNA-splicing factor 38 (LOC18104015), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024584101.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCGAATC GAACAGATCC AACAGCGAAG AACATAAGAG GGACAAACCC ACAAAACCTA 
    GTAGAGAAAA TCCTGCGGTC CAAAATCTAT CAACACACGT ACTGGAAAGA ACAATGTTTT 
    GGGTTAACTG CAGAGACTTT GGTCGATAAA GCGATGGAAC TCGATCACTT AGGTGGTACC 
    TACGGTGGAA ATCGTAAGCC GACGCCGTTT ATGTGTTTGG TCATGAAGAT GTTGCAAATT 
    CAACCTGAGA AAGATATTGT TGTTGAATTC ATTAAAAACG AAGATTACAA ATATGTGCGT 
    GTGCTTGGTG CTTTTTATCT GCGACTTACT GGGACTGATA TTGATGTGTA TCGTTACCTA 
    GAGCCTTTGT ATAATGACTA TCGAAAGTTG AGGAAAAAAC TAACTGATGG GAAATTCGCA 
    TTGACACACA TGGATGAAGT TATCGACGAG CTCTTGACAA AAGATTATTC TTGTGACATT 
    GCTATGCCCC GTATTAAGAA AAGATGGACT CTTGAAACAC TTGCTGCACT TGAACCTAGA 
    AAGAGTGTGT TGGAAGATGA TTTTGAAGAA GAGGAAGAGC GAGAAGAGAA TGAGCAACTT 
    GAGGGATTAG ACAATGGTGC TGATGAACGG GACTACTACC ATGAGAGAAG TCCTGCAAGG 
    GAAAGGGAAA GGGATCGGGA TCGGGATAGG GATAGAAGAC GTGATAGTCA CAGACATAGG 
    GATCGTGACT ATGATAGAGA TTATGACAAA GACTATGATA GGGAGCGTGG ACGTGGAAGA 
    GAGAGAGACA GGGACAGAGA TAGGGATCGC TATCGTTTGA GAGATGAAAG AGATTATGGT 
    CATGACCGGG AACGAGAAAG AGAAAGGGAA GGCAGGGAGC GTGAAAGACG AGATAGGGAC 
    CGTGGCAGGC GGAGGAGTCA TTCAAGGAGC CGAAGTAGGA GTCGGGATCG TAAAAGACAT 
    GCCCACAGCA GTAGTCCTAA AAGGCGTGGA GATGGAGCAG AAGAGCCGAA GAAGAAGAAG 
    AAGAAGGAAA AGAAGGAAAG GAAAGATGAT GGTACGGACC ACCCTGATCC GGAGATTGCT 
    GAAGCTAATA AGCTCCGAGC AGCCCTTGGG TTGAAACCAC TTAAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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