ORF » Species Summary » Populus trichocarpa » LOC18101640 cDNA ORF clone

LOC18101640 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18101640 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18101640 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa20349 XM_006379892.1
Latest version!		 Populus trichocarpa cytochrome P450 family protein (POPTR_0008s18370g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa435122 XM_006379892.2
Latest version!		 Populus trichocarpa cytochrome P450 86B1 (LOC18101640), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18101640 ( XM_006379892.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006379954.1 Populus trichocarpa cytochrome P450 family protein (POPTR_0008s18370g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa20349
    Clone ID Related Accession (Same CDS sequence) XM_006379892.1
    Accession Version XM_006379892.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1512bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product cytochrome P450 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCGTTGT TGGGACTCTT TGTTTTCCAA TGCATCAACG ATAGGCTCAC TAACAAAGGC 
    CCTATGCTAT GGCCTGTATT GGGGATCATA CCGACCATGT TCCTTCACGT CAACGACATG 
    AACAATTTCG TCACGAGAGC TTTAAGCAAA GCAGGGGGGA CCTTCCACCA TAAAGGAATG 
    TGGATGGGAG GCGCATATGG AATCGTGACC GCCGATCCTT CCAATATTGA GTATATGCTT 
    AAAACGAACT TCAAGAACTT CCCAAAAGGG AAATACTTCA GAGAGAGGTT TCAGGATTTG 
    CTAGGGGATG GTATTTTCAA TGCTGACGAT GAATTATGGA GGGAACAAAG GCAAGCAGTG 
    AGAGCAGAGA TGCATTCAAG CCGGTTCATT GAGCACTCGC TCCGAACCAT GAAAGATCTG 
    GTGCATCAGA AGCTGTTGAA GCTGACAGAT AATCTGGTAA GGTCAGGAGA TAGTTTTGAT 
    CTCCAAGAAG TGCTTCTCCG GTTTACATTT GATAACATTT GCAGTGCAGC TTTTGGGGTT 
    GATCCTGGGT GCTTAGCCCT AGATATCCCT GACGTTCCCT TCGCAAAAGC TTTTGAAAAA 
    GCAACAGAAT TGATTTTGTT CAGATTCCTG ATGCCGCCTT TCATTTGGAA GACCATGAAG 
    TTCTTTGGAA TAGGATACGA GAAGACGCTG AAGGAGGCAG TTGGAATTGT GCATGAATTT 
    GCTGAGAAGA CTGTGAAGGG TAGAAGAGAT GAGATCAGGA AGCATGGTAG CTTATGCCAT 
    CAATCTGATC TCTTGTCCAG GCTTATTGAG ATTGAATATA CTGGACGAGG CAAGGAGATG 
    CAATTCCCAG ATAAGTATTT CAGAGATTTG TGTGTAAATT TTATCCTAGC AGGGCGAGAC 
    ACCACATCAG TGGCATTGGC ATGGTTTTTC TGGTTAGTAC ACAGCAATCC ACAAGTAGAA 
    AACAGAATAC TACGCGAGAT CAATGACATT TTGTCCCTTC GTGAGACACA GACAAAAAAC 
    GAGGTCATTT TCACAATGGA AGAATTGAAC AAGATGGTGT ATCTTCAAGC AGCATTATCC 
    GAATCCCTGA GGCTGTATCC ATCTGTGCCT ATTGAAGTGA AAGAAGTTGT ACAAGATGAT 
    GTTCTCCCTG ATGGTTCCAT AGTGAAGAAG GGCGCCCGAG TTTTCTACTG CATATTCGCA 
    ATGGGCAGGA TGGATTCTAT ATGGGGAGAG AACTGCTTGG AGTTTAAGCC AGAGAGGTGG 
    ATTAAGGATG GAAAGTTTGT TAGTGAGAAC CAGTTCAAAT ATGCAGTGTT CAACGCCGGT 
    CCAAGGCTGT GCCTGGGGAA GAAGTTTGCA TACTTGCAGA TGAAAATGGT GGCAGCTTCA 
    ATCCTGTTGA GATATTCAGT TAAGGTAGTT GAAGGCCATG ATGCTATTCC AAAAATGACC 
    ACCACTCTCT ACATGAAGAA TGGACTGTTG GTGACTCTGA TGCCTAGATC GGTGAACACT 
    ACTGCATCAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006379954.1
    CDS55..1566
    Translation

    Target ORF information:

    RefSeq Version XM_006379892.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa cytochrome P450 family protein (POPTR_0008s18370g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006379892.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCGTTGT TGGGACTCTT TGTTTTCCAA TGCATCAACG ATAGGCTCAC TAACAAAGGC 
    CCTATGCTAT GGCCTGTATT GGGGATCATA CCGACCATGT TCCTTCACGT CAACGACATG 
    AACAATTTCG TCACGAGAGC TTTAAGCAAA GCAGGGGGGA CCTTCCACCA TAAAGGAATG 
    TGGATGGGAG GCGCATATGG AATCGTGACC GCCGATCCTT CCAATATTGA GTATATGCTT 
    AAAACGAACT TCAAGAACTT CCCAAAAGGG AAATACTTCA GAGAGAGGTT TCAGGATTTG 
    CTAGGGGATG GTATTTTCAA TGCTGACGAT GAATTATGGA GGGAACAAAG GCAAGCAGTG 
    AGAGCAGAGA TGCATTCAAG CCGGTTCATT GAGCACTCGC TCCGAACCAT GAAAGATCTG 
    GTGCATCAGA AGCTGTTGAA GCTGACAGAT AATCTGGTAA GGTCAGGAGA TAGTTTTGAT 
    CTCCAAGAAG TGCTTCTCCG GTTTACATTT GATAACATTT GCAGTGCAGC TTTTGGGGTT 
    GATCCTGGGT GCTTAGCCCT AGATATCCCT GACGTTCCCT TCGCAAAAGC TTTTGAAAAA 
    GCAACAGAAT TGATTTTGTT CAGATTCCTG ATGCCGCCTT TCATTTGGAA GACCATGAAG 
    TTCTTTGGAA TAGGATACGA GAAGACGCTG AAGGAGGCAG TTGGAATTGT GCATGAATTT 
    GCTGAGAAGA CTGTGAAGGG TAGAAGAGAT GAGATCAGGA AGCATGGTAG CTTATGCCAT 
    CAATCTGATC TCTTGTCCAG GCTTATTGAG ATTGAATATA CTGGACGAGG CAAGGAGATG 
    CAATTCCCAG ATAAGTATTT CAGAGATTTG TGTGTAAATT TTATCCTAGC AGGGCGAGAC 
    ACCACATCAG TGGCATTGGC ATGGTTTTTC TGGTTAGTAC ACAGCAATCC ACAAGTAGAA 
    AACAGAATAC TACGCGAGAT CAATGACATT TTGTCCCTTC GTGAGACACA GACAAAAAAC 
    GAGGTCATTT TCACAATGGA AGAATTGAAC AAGATGGTGT ATCTTCAAGC AGCATTATCC 
    GAATCCCTGA GGCTGTATCC ATCTGTGCCT ATTGAAGTGA AAGAAGTTGT ACAAGATGAT 
    GTTCTCCCTG ATGGTTCCAT AGTGAAGAAG GGCGCCCGAG TTTTCTACTG CATATTCGCA 
    ATGGGCAGGA TGGATTCTAT ATGGGGAGAG AACTGCTTGG AGTTTAAGCC AGAGAGGTGG 
    ATTAAGGATG GAAAGTTTGT TAGTGAGAAC CAGTTCAAAT ATGCAGTGTT CAACGCCGGT 
    CCAAGGCTGT GCCTGGGGAA GAAGTTTGCA TACTTGCAGA TGAAAATGGT GGCAGCTTCA 
    ATCCTGTTGA GATATTCAGT TAAGGTAGTT GAAGGCCATG ATGCTATTCC AAAAATGACC 
    ACCACTCTCT ACATGAAGAA TGGACTGTTG GTGACTCTGA TGCCTAGATC GGTGAACACT 
    ACTGCATCAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18101640 ( XM_006379892.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006379954.2 Populus trichocarpa cytochrome P450 86B1 (LOC18101640), mRNA.
    Price & Availability↑
    CloneID OPa435122
    Clone ID Related Accession (Same CDS sequence) XM_006379892.2
    Accession Version XM_006379892.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1599bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product cytochrome P450 86B1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006379892.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAGAAGAG AGCCTACTAT GGCAGAAAAT ATATTGTCCT CTGCAACGCA ATGGATTTAC 
    ACTCACTCAT CATTTTGGGA TGTATCTATG GCGTTGTTGG GACTCTTCGT TTTCCAATGC 
    ATAAACGATA GGCTCACTAA CAAAGGCCCT ATGCTATGGC CTGTATTGGG GATCATACCG 
    ACCATGTTCC TTCACGTCAA CGACATGAAC AATTTCGTCA CGAGAGCTTT AAGCAAAGCA 
    GGGGGGACCT TCCACCATAA AGGAATGTGG ATGGGAGGCG CATATGGAAT CGTGACCGCC 
    GATCCTTCCA ATATTGAGTA TATGCTTAAA ACGAACTTCA AGAACTTCCC AAAAGGGAAA 
    TACTTCAGAG AGAGGTTTCA GGATTTGCTA GGGGATGGTA TTTTCAATGC TGACGATGAA 
    TTATGGAGGG AACAAAGGCA AGCAGTGAGA GCAGAGATGC ATTCAAGCCG GTTCATTGAG 
    CACTCGCTCC GAACCATGAA AGATCTGGTG CATCAGAAGC TGTTGAAGCT GACAGATAAT 
    CTGGTAAGGT CAGGAGATAG TTTTGATCTC CAAGAAGTGC TTCTCCGGTT TACATTTGAT 
    AACATTTGCA GTGCAGCTTT TGGGGTTGAT CCTGGGTGCT TAGCCCTAGA TATCCCTGAC 
    GTTCCCTTCG CAAAAGCTTT TGAAAAAGCA ACAGAATTGA TTTTGTTCAG ATTCCTGATG 
    CCGCCTTTCA TTTGGAAGAC CATGAAGTTC TTTGGAATAG GATACGAGAA GACGCTGAAG 
    GAGGCAGTTG GAATTGTGCA TGAATTTGCT GAGAAGACAG TAAAGGGTAG AAGAGATGAG 
    ATCAGGAAGC ATGGTAGCTT ATGCCATCAA TCTGATCTCT TGTCCAGGCT TATTGAGATT 
    GAATATACTG GACGAGGCAA GGAGATGCAA TTCCCAGATA AGTATTTCAG AGATTTGTGT 
    GTAAATTTTA TCCTAGCAGG GCGAGACACC ACATCAGTGG CATTGGCATG GTTTTTCTGG 
    TTAGTACACA GCAATCCACA AGTAGAAAAC AGAATACTAC GCGAGATCAA TGACATTTTG 
    TCCCTTCGTG AGACACAGAC AAAAAACGAG GTCATTTTCA CAATGGAAGA ATTGAACAAG 
    ATGGTGTATC TTCAAGCAGC ATTATCCGAA TCCCTGAGGC TGTATCCATC TGTGCCTATT 
    GAAGTGAAAG AAGTTGTACA AGATGATGTT CTCCCTGATG GTTCCATAGT GAAGAAGGGC 
    GCCCGAGTTT TCTACTGCAT ATTCGCAATG GGCAGGATGG ATTCTATATG GGGAGAGAAC 
    TGCTTGGAGT TTAAGCCAGA GAGGTGGATT AAGGATGGAA AGTTTGTTAG TGAGAACCAG 
    TTCAAATATG CAGTGTTCAA CGCCGGTCCA AGGCTGTGCC TGGGGAAGAA GTTTGCATAC 
    TTGCAGATGA AAATGGTGGC AGCTTCAATC CTGTTGAGAT ATTCAGTTAA GGTAGTTGAA 
    GGCCATGATG CTATTCCAAA AATGACCACC ACTCTCTACA TGAAGAATGG ACTGTTGGTG 
    ACTCTGATGC CTAGATCGGT GAACACTACT GCATCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006379954.2
    CDS27..1625
    Translation

    Target ORF information:

    RefSeq Version XM_006379892.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa cytochrome P450 86B1 (LOC18101640), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006379892.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGAGAAGAG AGCCTACTAT GGCAGAAAAT ATATTGTCCT CTGCAACGCA ATGGATTTAC 
    ACTCACTCAT CATTTTGGGA TGTATCTATG GCGTTGTTGG GACTCTTCGT TTTCCAATGC 
    ATAAACGATA GGCTCACTAA CAAAGGCCCT ATGCTATGGC CTGTATTGGG GATCATACCG 
    ACCATGTTCC TTCACGTCAA CGACATGAAC AATTTCGTCA CGAGAGCTTT AAGCAAAGCA 
    GGGGGGACCT TCCACCATAA AGGAATGTGG ATGGGAGGCG CATATGGAAT CGTGACCGCC 
    GATCCTTCCA ATATTGAGTA TATGCTTAAA ACGAACTTCA AGAACTTCCC AAAAGGGAAA 
    TACTTCAGAG AGAGGTTTCA GGATTTGCTA GGGGATGGTA TTTTCAATGC TGACGATGAA 
    TTATGGAGGG AACAAAGGCA AGCAGTGAGA GCAGAGATGC ATTCAAGCCG GTTCATTGAG 
    CACTCGCTCC GAACCATGAA AGATCTGGTG CATCAGAAGC TGTTGAAGCT GACAGATAAT 
    CTGGTAAGGT CAGGAGATAG TTTTGATCTC CAAGAAGTGC TTCTCCGGTT TACATTTGAT 
    AACATTTGCA GTGCAGCTTT TGGGGTTGAT CCTGGGTGCT TAGCCCTAGA TATCCCTGAC 
    GTTCCCTTCG CAAAAGCTTT TGAAAAAGCA ACAGAATTGA TTTTGTTCAG ATTCCTGATG 
    CCGCCTTTCA TTTGGAAGAC CATGAAGTTC TTTGGAATAG GATACGAGAA GACGCTGAAG 
    GAGGCAGTTG GAATTGTGCA TGAATTTGCT GAGAAGACAG TAAAGGGTAG AAGAGATGAG 
    ATCAGGAAGC ATGGTAGCTT ATGCCATCAA TCTGATCTCT TGTCCAGGCT TATTGAGATT 
    GAATATACTG GACGAGGCAA GGAGATGCAA TTCCCAGATA AGTATTTCAG AGATTTGTGT 
    GTAAATTTTA TCCTAGCAGG GCGAGACACC ACATCAGTGG CATTGGCATG GTTTTTCTGG 
    TTAGTACACA GCAATCCACA AGTAGAAAAC AGAATACTAC GCGAGATCAA TGACATTTTG 
    TCCCTTCGTG AGACACAGAC AAAAAACGAG GTCATTTTCA CAATGGAAGA ATTGAACAAG 
    ATGGTGTATC TTCAAGCAGC ATTATCCGAA TCCCTGAGGC TGTATCCATC TGTGCCTATT 
    GAAGTGAAAG AAGTTGTACA AGATGATGTT CTCCCTGATG GTTCCATAGT GAAGAAGGGC 
    GCCCGAGTTT TCTACTGCAT ATTCGCAATG GGCAGGATGG ATTCTATATG GGGAGAGAAC 
    TGCTTGGAGT TTAAGCCAGA GAGGTGGATT AAGGATGGAA AGTTTGTTAG TGAGAACCAG 
    TTCAAATATG CAGTGTTCAA CGCCGGTCCA AGGCTGTGCC TGGGGAAGAA GTTTGCATAC 
    TTGCAGATGA AAATGGTGGC AGCTTCAATC CTGTTGAGAT ATTCAGTTAA GGTAGTTGAA 
    GGCCATGATG CTATTCCAAA AATGACCACC ACTCTCTACA TGAAGAATGG ACTGTTGGTG 
    ACTCTGATGC CTAGATCGGT GAACACTACT GCATCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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