POPTR_0006s08010g cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following POPTR_0006s08010g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0006s08010g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa431708 XM_006381110.2
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Populus trichocarpa 3-ketoacyl-CoA synthase 15 (LOC18099963), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa431708
    Clone ID Related Accession (Same CDS sequence) XM_006381110.2
    Accession Version XM_006381110.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1530bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 3-ketoacyl-CoA synthase 15
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006381110.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGGAG AGCAGGAGTT ATTGTCCACT GAAATTGTGA ACCGGGGCAT AGAGAATTCA 
    GGCCCATATG CTGGCTCTTT GAATTTCTCT GTCAGGGTTC GACGAGGATT GCCGGATTTC
    CTCAACTCGG TTAACTTGAA ATATGTCAAG CTGGGATATT CCTATCTCCT TAGCCCTGTC
    TTTTATTTCC TAACAGCACC AGTTCTCATG GTGATCTTCA GTGCTCAGAT TGGAAAGCTC
    TTCATCTGGC AAGATTTCTG TCCAAAATGT GACCCCATTG ATGCACTTTT CATTGTGGGA
    TTGTTGAGTT TAATTATATA CATTTATCTT TATTTAAGCC CTCGGTCTAC TTATTTAGTC
    GACTTCGCTT GTTATCGTCC ACCAAATGAA CTCAAGATTT CGAAGGACGA ATTCATCGAG
    TTGGCGAAGA AATCAGGCAA ATTTAATGGT GCCGCCATAG AGTTTCAGCG CCGAGCTCTC
    AAGAATTCTG GCATTGGAGA TGAGACCTAC ATGCCTAGAA TAGTTTTTCA ACCTGGGCAC
    AAGATAACAC TAAAGGATGG CCGTGAAGAG GCAGCAATGG TCATGTTTGG AGCAGTAGAT
    GACCTTCTTG CCGCCACAAA AATAAGGCCC AAGGACATAA AAATTCTTAT TGTCAACTGT
    GGGATCCTAA ATACTACCCC GTCACTCTCA TCAATGGTAA TAAATCACTA CAAGCTTAGG
    CATGATATTC AAAACTTCAA TCTCGGTGGC ATGGGATGTG CTGCTGGCAT TATAGCTATT
    GATCTAGCTA AAGACCTTCT GAATGCATAT CCTGGATGCT ATGCACTGGT GGTGAGCACA
    GAAGCGGTGA GCTATACATG GTACAGTGGC AATGATATGG ATATGCTCCT TCCTAATTGT
    TTCTTCAGAC TTGGCGCAGC AGCCATGCTT CTATCCAGTT GCCGCCTTGA CCGATGGCGA
    TCTAAGTATG AACTGAAGAC GCTAGTTCGA ACTCACAAAG GCATGGACAA CAGAAGCTTC
    AAAAGCATAC ATCTAAGGGA AGATGCAGAA CGAAAGCAAG GTCTGTCAGT TAGCAAGGAT
    CTGGTTGAGG TGGGAGGCCA TGCACTCAAG GCCAACATCA CCACTCTAGG CCCTTTAGTC
    CTTCCCGTGT CTGAACAAGT TCATTTTTTC ACTAATTTGC TCTTCAAGAA GAAAAACAGA
    CCATACATTC CAAACTACAA GCTTGCTTTT GAGCATGTGT GCATCCTAGC AACTAGCAAA
    AAGGTGCTAG ATGAAATACA GAAGAACTTG GAGCTTACAG AGGAATACAT GGAGGCATCA
    AAGAAAACTT TGGAGCAATT TGGGAACACT TCGAGTAGCA GTGTCTGGTA TGAACTCGCT
    TACTTGGAGA CAAATACAAG GATCAAACGA GGTGATAGGA TCTGGCAACT TGCTTTTGGT
    TCGGGGTTCA AGTGCAACAG TGTTGTTTGG AAGGCGCTTG GGAATGTTGG GAAGCCCAAG
    CGGAGTCCTT GGATTCAGGA TTCTAACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006381172.2
    CDS108..1637
    Translation

    Target ORF information:

    RefSeq Version XM_006381110.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 3-ketoacyl-CoA synthase 15 (LOC18099963), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006381110.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGGAG AGCAGGAGTT ATTGTCCACT GAAATTGTGA ACCGGGGCAT AGAGAATTCA 
    GGCCCATATG CTGGCTCTTT GAATTTCTCT GTCAGGGTTC GACGAGGATT GCCGGATTTC
    CTCAACTCGG TTAACTTGAA ATATGTCAAG CTGGGATATT CCTATCTCCT TAGCCCTGTC
    TTTTATTTCC TAACAGCACC AGTTCTCATG GTGATCTTCA GTGCTCAGAT TGGAAAGCTC
    TTCATCTGGC AAGATTTCTG TCCAAAATGT GACCCCATTG ATGCACTTTT CATTGTGGGA
    TTGTTGAGTT TAATTATATA CATTTATCTT TATTTAAGCC CTCGGTCTAC TTATTTAGTC
    GACTTCGCTT GTTATCGTCC ACCAAATGAA CTCAAGATTT CGAAGGACGA ATTCATCGAG
    TTGGCGAAGA AATCAGGCAA ATTTAATGGT GCCGCCATAG AGTTTCAGCG CCGAGCTCTC
    AAGAATTCTG GCATTGGAGA TGAGACCTAC ATGCCTAGAA TAGTTTTTCA ACCTGGGCAC
    AAGATAACAC TAAAGGATGG CCGTGAAGAG GCAGCAATGG TCATGTTTGG AGCAGTAGAT
    GACCTTCTTG CCGCCACAAA AATAAGGCCC AAGGACATAA AAATTCTTAT TGTCAACTGT
    GGGATCCTAA ATACTACCCC GTCACTCTCA TCAATGGTAA TAAATCACTA CAAGCTTAGG
    CATGATATTC AAAACTTCAA TCTCGGTGGC ATGGGATGTG CTGCTGGCAT TATAGCTATT
    GATCTAGCTA AAGACCTTCT GAATGCATAT CCTGGATGCT ATGCACTGGT GGTGAGCACA
    GAAGCGGTGA GCTATACATG GTACAGTGGC AATGATATGG ATATGCTCCT TCCTAATTGT
    TTCTTCAGAC TTGGCGCAGC AGCCATGCTT CTATCCAGTT GCCGCCTTGA CCGATGGCGA
    TCTAAGTATG AACTGAAGAC GCTAGTTCGA ACTCACAAAG GCATGGACAA CAGAAGCTTC
    AAAAGCATAC ATCTAAGGGA AGATGCAGAA CGAAAGCAAG GTCTGTCAGT TAGCAAGGAT
    CTGGTTGAGG TGGGAGGCCA TGCACTCAAG GCCAACATCA CCACTCTAGG CCCTTTAGTC
    CTTCCCGTGT CTGAACAAGT TCATTTTTTC ACTAATTTGC TCTTCAAGAA GAAAAACAGA
    CCATACATTC CAAACTACAA GCTTGCTTTT GAGCATGTGT GCATCCTAGC AACTAGCAAA
    AAGGTGCTAG ATGAAATACA GAAGAACTTG GAGCTTACAG AGGAATACAT GGAGGCATCA
    AAGAAAACTT TGGAGCAATT TGGGAACACT TCGAGTAGCA GTGTCTGGTA TGAACTCGCT
    TACTTGGAGA CAAATACAAG GATCAAACGA GGTGATAGGA TCTGGCAACT TGCTTTTGGT
    TCGGGGTTCA AGTGCAACAG TGTTGTTTGG AAGGCGCTTG GGAATGTTGG GAAGCCCAAG
    CGGAGTCCTT GGATTCAGGA TTCTAACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D