POPTR_0006s05420g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0006s05420g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0006s05420g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa15981 XM_006380956.1
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0006s05420g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00
OPa431952 XM_024603698.1
Latest version!
Populus trichocarpa DNA-directed RNA polymerase I subunit 1 (LOC18099840), mRNA. pcDNA3.1-C-(k)DYK or customized vector 24-26 $951.30
$1359.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa15981
    Clone ID Related Accession (Same CDS sequence) XM_006380956.1
    Accession Version XM_006380956.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3399bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). COMPLETENESS: incomplete on the 5' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    ATGTTTCGGC AGAAAATGAT GGGAAAGAGG GTTAATTATG CATGCCGGTC TGTTATTTCC 
    CCAGATCCTT ATTTAGATGT TAACGAAATT GGAATTCCTC CGTGCTTTGC AGTGAAGTTA
    ACATATCCTG AGAGAGTGAC ACCCTGGAAT GTTGCCAAAT TGAGAAATGC TGTAATCAAT
    GGTGCTGAAA GTCATCCTGG AGCTACACAC TATGTGGATA AGCTGTCTAC TACTAAGCTT
    CCACTGAATC GAAAAATGCG TGTTTCTGTA GCAAGGAAAT TATCCGGGAG GAGTGTTGAT
    TATGAATATG AAGGGAAAAT TGTATATCGC CATTTGCAAG ATGGAGATAT TGTGCTTGTC
    AATCGACAGG GGGAGAAGAC ACTACGCATG CACTATGCAA ATTGCAGTAC ATACAATGCT
    GATTTTGATG GTGATGAAAT GAATGTTCAT TTCCCACAAG ATGAAGTTTC TCGAGCTGAA
    GGTTACAACA TTGTTAATGC AAATAATCAA TATGTCAGGC CTTCCAATGG CGAACCAATT
    AGATCCTTGA TTCAGGATCA TATTATTAGT GCTGTGCTTT TAACAAAGAA GGACACTTTT
    TTGACTGAGG ATGAAGTTTA TCAACTGCTT TATAGTTCTG GCGTGTCAAA TGCTCGTCCA
    ACATCTTTCA GTGGCAAAGC TGGCCGGAAA GTTATATTCT TAAGTTATGA AGATGAGATT
    GAAACCGTTG ATCCTGCAAT AAGGAAACCC ATTTATCTGT GGTCAGGAAA ACAGTTGATT
    ACTGCTGTGT TGAATCACAT TACAAGGGGC CATCCACCAT TCACTGTTGA GAAAGGTGGG
    AAGCTCTCGT ATGATTTTTT TAAGAGTAAA ATTAAGAATG GCAAATCTAG CAATGGAGAA
    AAAGTTGGTG TAAGCAAACC AATGAAGGAA AAAGAGTCTG GCAAAGTCAA TCCAAAAGAA
    AATCAGCTTG AAGATGATAA GATGATTATC TTTAGGAATG TATTGGTCCA AGGGGTGATT
    GACAAGGCCC AGTTTGGTGA GTATGGTTTG GTGCACACAG TTCAAGAATT GTTTGGTGCA
    AAAGCAGCTG GCACCCTGCT CTCTGTTTTC AGTCGTTTAT TCACTGCTTA TTTGCAGATG
    CATGGATTCA CATGTGGAGT TGATGATCTT TTGATAACGA AAATTAAAGA CGACGAAAGG
    AAGAAGCAAC TTGAAAACTG TGAAAAGTGT GGGGAACAAA TTCATCGTAA ATTTATCGGA
    ATCAAGGATG AGAACATTAA GATAGATCCA TTGGAATTAC AATCAAATAT CGAGAAAACT
    ATACGCAGTG ATGGTGAGTC TGCCTTGACA TATCTGGATA GGCAGATGAC AAATGAACTA
    AATTCCAAAA CAAGCTCAGG AGTCATCAAT GAGCTGTTGT CTGAAGGGTT GCTAAAACCC
    TCTGGAAAGA ATTGCATATC ACTTATGACT ACATCTGGGG CTAAAGGTAG CAAGGTCAAT
    TTCCAACAGA TATCTTCTTT TCTAGGCCAA CAGGAGTTGG AAGGTAAAAG AGTTCCTCGA
    ATGGTTTCTG GAAAGACATT GCCCTGCTTT CATCCATGGG ATTGGGCAGC CCGTGCTGGA
    GGCTATATTA TTGATCGTTT TCTCACCGGT CTGCGTCCTC AAGAATATTA TTTCCATTGT
    ATGGCTGGTC GTGAAGGGTT GTTACTGAAG CAAAAGTTTT TCACGAGTCT TGCACAACCA
    GGAGAACCAG TTGGTGTCCT TGCTGCTCAG TCTGTAGGAG AACCATCAAC ACAGATGACG
    CTGAACACTT TCCATCTAGC CGGGCGTGGT GAAATGAATG TAACACTTGG AATTCCACGT
    CTCCAAGAGA TTTTGATGAC TGCTTCAGCT GATATCAAGA CTCCGATTAT GACCTGCCCC
    TTGCATGAAG GGAGAACTAA AGAGGATGCT GAGCGCCTTT CTGATAAGTT GAAGAAGGTC
    ACCGTAGCCG ATATAGTAGA GAGCATGGAA GTATCTGTCA TGCCATTTGC TGTTCAGAAT
    GACGACATTT GCAGAATTTA TAAGCTTAAA ATGAAGCTTT ATACACCAGC GCACTACCCA
    CAACATGCTG ATATATCAGT AGAAAATTGG GAAGAAACCC TTGAGGTGTT GTTTGTGAGA
    GAGTTGGAGG ATGCTATACA AAATTATCTG GTTTTGCTTT CTAAAATTAG CGGCATTAAG
    AATTTTTTGA AGGAATCACA TTCAGGGACG CCAATTGAAG CAGAAGAAGA TGTTTCTGGC
    AACATATCAC GCGAGGGTGA AAACGATGAT GATAGTGATG ATGAAGAAGG GGAAGAGGCT
    GATGATCTAG GTTTAGATGT GCAGAAAAGA AAACAGCAAG TTACAGATGA GATGGATTAT
    GATGATGGCT CTGAGGGGGT ACTGAATGAA GATGAAGGGG ATTTATCAGG AAGCCAGGCT
    CCATCTGGAT CTGAAAGTGA TACTGAACCG GCTGATAAAG AAAGTGAGAT CAGTAATACC
    GATATGGTTG ACTATGACAG TGAATATTTT GAAAAGCCAA CACATCTTGG AAATTACTCT
    AAGCCAAAGT CAAGGAAGAA AACCTCAGAA AGTTCATCAC AAGTCGAAAT GCATTCTAAG
    CTAAAGTCAA CAGAAAAGAA GAAACAAAAG GCCAAGGGAA AGAAAGTTAG ATCGAAATTA
    GTTAAAAAGG ACTTTGATAG ATCAATCTTT GTGGAAGCCA AGGGATTGCA CTTTGAAATC
    CATCTTAAAT TCACCAATGA GCCTCATATT TTACTGGCCG AGATTGCTCA GAAGACAGCC
    AAGAAGGTCT GTATCCAGAA TCCCGGGAAG GTTCAACGGT GTCAAGTGAC TGATTGCAAA
    GAAAATCAAG TGATTTACTA TGGGAAAGAC CCCAAGAGAA GAATTGATAT TGAACCTGGG
    GAAAAACAAA AAATCCCAGC GCTTCATACA ATTGGAGTGG ACTTCAATAC ATTTTGGAAA
    ATGCAAGATC ACCTTGATGT TAGGTATATG TATTCAAATA GCATTCATGG TATGTTGAAA
    GCTTATGGAG TAGAGGCCGC AAGAGAGACA ATCATTAGGG AGATAAAGCA CGTGTTCAAT
    TCTTATGGAA TATCCGTTAA TACACGGCAT TTGTCTCTTA TTGCTGATTA TATGACCCAT
    ACCGGTGAGT ACCGTCCGAT GAGCCGTATT GGGGGCATAT CAGAGTCGAT ATCACCTTTA
    AGTAAAATGT CTTTTGAGAC AGCGTCCAAA TTCATAGTTG AAGCAGCATT GCACGGGGAG
    GTCGATAATT TGGAAGCTCC ATCTGCAAGG GTTTGTCTTG GATTGCCAGT GAAAATGGGT
    ACTGGATCTT TTGATTTGAT GCAGAAACTG GAAATTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006381018.1
    CDS1..3399
    Translation

    Target ORF information:

    RefSeq Version XM_006380956.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0006s05420g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006380956.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    ATGTTTCGGC AGAAAATGAT GGGAAAGAGG GTTAATTATG CATGCCGGTC TGTTATTTCC 
    CCAGATCCTT ATTTAGATGT TAACGAAATT GGAATTCCTC CGTGCTTTGC AGTGAAGTTA
    ACATATCCTG AGAGAGTGAC ACCCTGGAAT GTTGCCAAAT TGAGAAATGC TGTAATCAAT
    GGTGCTGAAA GTCATCCTGG AGCTACACAC TATGTGGATA AGCTGTCTAC TACTAAGCTT
    CCACTGAATC GAAAAATGCG TGTTTCTGTA GCAAGGAAAT TATCCGGGAG GAGTGTTGAT
    TATGAATATG AAGGGAAAAT TGTATATCGC CATTTGCAAG ATGGAGATAT TGTGCTTGTC
    AATCGACAGG GGGAGAAGAC ACTACGCATG CACTATGCAA ATTGCAGTAC ATACAATGCT
    GATTTTGATG GTGATGAAAT GAATGTTCAT TTCCCACAAG ATGAAGTTTC TCGAGCTGAA
    GGTTACAACA TTGTTAATGC AAATAATCAA TATGTCAGGC CTTCCAATGG CGAACCAATT
    AGATCCTTGA TTCAGGATCA TATTATTAGT GCTGTGCTTT TAACAAAGAA GGACACTTTT
    TTGACTGAGG ATGAAGTTTA TCAACTGCTT TATAGTTCTG GCGTGTCAAA TGCTCGTCCA
    ACATCTTTCA GTGGCAAAGC TGGCCGGAAA GTTATATTCT TAAGTTATGA AGATGAGATT
    GAAACCGTTG ATCCTGCAAT AAGGAAACCC ATTTATCTGT GGTCAGGAAA ACAGTTGATT
    ACTGCTGTGT TGAATCACAT TACAAGGGGC CATCCACCAT TCACTGTTGA GAAAGGTGGG
    AAGCTCTCGT ATGATTTTTT TAAGAGTAAA ATTAAGAATG GCAAATCTAG CAATGGAGAA
    AAAGTTGGTG TAAGCAAACC AATGAAGGAA AAAGAGTCTG GCAAAGTCAA TCCAAAAGAA
    AATCAGCTTG AAGATGATAA GATGATTATC TTTAGGAATG TATTGGTCCA AGGGGTGATT
    GACAAGGCCC AGTTTGGTGA GTATGGTTTG GTGCACACAG TTCAAGAATT GTTTGGTGCA
    AAAGCAGCTG GCACCCTGCT CTCTGTTTTC AGTCGTTTAT TCACTGCTTA TTTGCAGATG
    CATGGATTCA CATGTGGAGT TGATGATCTT TTGATAACGA AAATTAAAGA CGACGAAAGG
    AAGAAGCAAC TTGAAAACTG TGAAAAGTGT GGGGAACAAA TTCATCGTAA ATTTATCGGA
    ATCAAGGATG AGAACATTAA GATAGATCCA TTGGAATTAC AATCAAATAT CGAGAAAACT
    ATACGCAGTG ATGGTGAGTC TGCCTTGACA TATCTGGATA GGCAGATGAC AAATGAACTA
    AATTCCAAAA CAAGCTCAGG AGTCATCAAT GAGCTGTTGT CTGAAGGGTT GCTAAAACCC
    TCTGGAAAGA ATTGCATATC ACTTATGACT ACATCTGGGG CTAAAGGTAG CAAGGTCAAT
    TTCCAACAGA TATCTTCTTT TCTAGGCCAA CAGGAGTTGG AAGGTAAAAG AGTTCCTCGA
    ATGGTTTCTG GAAAGACATT GCCCTGCTTT CATCCATGGG ATTGGGCAGC CCGTGCTGGA
    GGCTATATTA TTGATCGTTT TCTCACCGGT CTGCGTCCTC AAGAATATTA TTTCCATTGT
    ATGGCTGGTC GTGAAGGGTT GTTACTGAAG CAAAAGTTTT TCACGAGTCT TGCACAACCA
    GGAGAACCAG TTGGTGTCCT TGCTGCTCAG TCTGTAGGAG AACCATCAAC ACAGATGACG
    CTGAACACTT TCCATCTAGC CGGGCGTGGT GAAATGAATG TAACACTTGG AATTCCACGT
    CTCCAAGAGA TTTTGATGAC TGCTTCAGCT GATATCAAGA CTCCGATTAT GACCTGCCCC
    TTGCATGAAG GGAGAACTAA AGAGGATGCT GAGCGCCTTT CTGATAAGTT GAAGAAGGTC
    ACCGTAGCCG ATATAGTAGA GAGCATGGAA GTATCTGTCA TGCCATTTGC TGTTCAGAAT
    GACGACATTT GCAGAATTTA TAAGCTTAAA ATGAAGCTTT ATACACCAGC GCACTACCCA
    CAACATGCTG ATATATCAGT AGAAAATTGG GAAGAAACCC TTGAGGTGTT GTTTGTGAGA
    GAGTTGGAGG ATGCTATACA AAATTATCTG GTTTTGCTTT CTAAAATTAG CGGCATTAAG
    AATTTTTTGA AGGAATCACA TTCAGGGACG CCAATTGAAG CAGAAGAAGA TGTTTCTGGC
    AACATATCAC GCGAGGGTGA AAACGATGAT GATAGTGATG ATGAAGAAGG GGAAGAGGCT
    GATGATCTAG GTTTAGATGT GCAGAAAAGA AAACAGCAAG TTACAGATGA GATGGATTAT
    GATGATGGCT CTGAGGGGGT ACTGAATGAA GATGAAGGGG ATTTATCAGG AAGCCAGGCT
    CCATCTGGAT CTGAAAGTGA TACTGAACCG GCTGATAAAG AAAGTGAGAT CAGTAATACC
    GATATGGTTG ACTATGACAG TGAATATTTT GAAAAGCCAA CACATCTTGG AAATTACTCT
    AAGCCAAAGT CAAGGAAGAA AACCTCAGAA AGTTCATCAC AAGTCGAAAT GCATTCTAAG
    CTAAAGTCAA CAGAAAAGAA GAAACAAAAG GCCAAGGGAA AGAAAGTTAG ATCGAAATTA
    GTTAAAAAGG ACTTTGATAG ATCAATCTTT GTGGAAGCCA AGGGATTGCA CTTTGAAATC
    CATCTTAAAT TCACCAATGA GCCTCATATT TTACTGGCCG AGATTGCTCA GAAGACAGCC
    AAGAAGGTCT GTATCCAGAA TCCCGGGAAG GTTCAACGGT GTCAAGTGAC TGATTGCAAA
    GAAAATCAAG TGATTTACTA TGGGAAAGAC CCCAAGAGAA GAATTGATAT TGAACCTGGG
    GAAAAACAAA AAATCCCAGC GCTTCATACA ATTGGAGTGG ACTTCAATAC ATTTTGGAAA
    ATGCAAGATC ACCTTGATGT TAGGTATATG TATTCAAATA GCATTCATGG TATGTTGAAA
    GCTTATGGAG TAGAGGCCGC AAGAGAGACA ATCATTAGGG AGATAAAGCA CGTGTTCAAT
    TCTTATGGAA TATCCGTTAA TACACGGCAT TTGTCTCTTA TTGCTGATTA TATGACCCAT
    ACCGGTGAGT ACCGTCCGAT GAGCCGTATT GGGGGCATAT CAGAGTCGAT ATCACCTTTA
    AGTAAAATGT CTTTTGAGAC AGCGTCCAAA TTCATAGTTG AAGCAGCATT GCACGGGGAG
    GTCGATAATT TGGAAGCTCC ATCTGCAAGG GTTTGTCTTG GATTGCCAGT GAAAATGGGT
    ACTGGATCTT TTGATTTGAT GCAGAAACTG GAAATTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa431952
    Clone ID Related Accession (Same CDS sequence) XM_024603698.1
    Accession Version XM_024603698.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 5103bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product DNA-directed RNA polymerase I subunit 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    4501
    4561
    4621
    4681
    4741
    4801
    4861
    4921
    4981
    5041
    5101
    ATGGCTGCCC TAGAGGGTGC AACTGTGTCA GTTGATTCGG TAGCGTTTAG CTTCTTAACG 
    GATGAAGAGG TTCATAAGCA TAGTTTTGTA AAGATTACCA GCGCGAGATT GCTTGATACT
    TTGGACAAAC CTGTGCCTGG TGGATTATAT GACCCAGCAA TGGGGCCTCT AGGGGATGAG
    CCTTGCAAAA CATGCGGTCA ACGTTCAACT AATTGCACAG GTCATTGTGG CCATATAGAT
    CTGATTAGTC CAGTTTACAA TCCTCTGCTC TTTAATTTTC TTCACAAACT TCTGCAAAGA
    ACCTGTTTCT TCTGCTTTCA TTTTAGAGCA GATAGCAACC AGGTTGAGAA ATTTGTTTCT
    CAATTGGAAC TCATCATAAA AGGTGATGTT GTTGGGGCTA AAAGGTTGGA TTCTTTCTCG
    CCAATTGAAG CCTCATTGCC AGAAGACAGT GATGGCAGCA GTGAATCTTG TTCTACAATT
    CATTCAGGAG CACGGCATCC AAACAATGAG CAGTCAAAGC AGAGCGAATG GACCTCCCTT
    CAGTTATCTG AAGCAATGTC TATCTTAAAT AATTTTCTGA AGTTGGAATC AAAGAAGTGC
    AAGAACTGTT CAGCATCAAA TCCTAATATT CGGAAGCCTA CTTTTGGTTG GTTTCATTGG
    GCAGGTTTAT CAAATGCAGC TATTAGATCA AATCTGATTA AGCAGCAGAC AATTGAAGGG
    CCATTTGGGG GTGCATTTGA AGAGTTGATA GATGCAGAAG ATGCAACCAA ATCTCCTAGT
    AACAAAGAGT CTGCCACAAA CAGGAATTTG AAAGAACACC AGAAATTGCA ACATCAGTTC
    ACTAGCCAGA AAGATGCTTT GTCCTCGCAG TTATTACCAT CAGAAGCGAT GGATATTTTA
    AAGCTTTTGT GGAAAAATGA AGCTCAACTC TGCTCATTGA TGAGTGACAT TCAGCAGCAA
    GGAGTAGGAA AGAAAAAGGC AGGACATTCT ATGTTCTTTC TGAACACTGT TTTAGTGCCT
    CCAATCAAAT TCAGGCCTCC GACCAAGGGA GGCGACTCTG TGATGGAACA TCCTCTATCT
    GTTTTGCTGA GCAAGGTGCT GGAATTGAAT GGATCTTTGG CAGATGCGCA TAGAAGCAAT
    GATTTCCCAT TAATAGCTAG GCGGTGGTTG GAACTTCAGC AATCTCTAAA TGTCTTGTTT
    GATTCCAATA CTGCCAAGGG TCAGAAGGAT GTGATTTCTG GGATATGCCA GATACTTGAG
    AAAAAGGAGG GTATGTTTCG GCAGAAAATG ATGGGAAAGA GGGTTAATTA TGCATGCCGG
    TCTGTTATTT CCCCAGATCC TTATTTAGAT GTTAACGAAA TTGGAATTCC TCCGTGCTTT
    GCAGTGAAGT TAACATATCC TGAGAGAGTG ACACCCTGGA ATGTTGCCAA ATTGAGAAAT
    GCTGTAATCA ATGGTGCTGA AAGTCATCCT GGAGCTACAC ACTATGTGGA TAAGCTGTCT
    ACTACTAAGC TTCCACTGAA TCGAAAAATG CGTGTTTCTG TAGCAAGGAA ATTATCCGGG
    AGGAGTGTTG ATTATGAATA TGAAGGGAAA ATTGTATATC GCCATTTGCA AGATGGAGAT
    ATTGTGCTTG TCAATCGACA GCCTACACTT CACAAACCAA GTATAATGGC ACATGTAGTT
    CGTGTATTGA AGGGGGAGAA GACACTACGC ATGCACTATG CAAATTGCAG TACATACAAT
    GCTGATTTTG ATGGTGATGA AATGAATGTT CATTTCCCAC AAGATGAAGT TTCTCGAGCT
    GAAGGTTACA ACATTGTTAA TGCAAATAAT CAATATGTCA GGCCTTCCAA TGGCGAACCA
    ATTAGATCCT TGATTCAGGA TCATATTATT AGTGCTGTGC TTTTAACAAA GAAGGACACT
    TTTTTGACTG AGGATGAAGT TTATCAACTG CTTTATAGTT CTGGCGTGTC AAATGCTCGT
    CCAACATCTT TCAGTGGCAA AGCTGGCCGG AAAGTTATAT TCTTAAGTTA TGAAGATGAG
    ATTGAAACCG TTGATCCTGC AATAAGGAAA CCCATTTATC TGTGGTCAGG AAAACAGTTG
    ATTACTGCTG TGTTGAATCA CATTACAAGG GGCCATCCAC CATTCACTGT TGAGAAAGGT
    GGGAAGCTCT CGTATGATTT TTTTAAGAGT AAAATTAAGA ATGGCAAATC TAGCAATGGA
    GAAAAAGTTG GTGTAAGCAA ACCAATGAAG GAAAAAGAGT CTGGCAAAGT CAATCCAAAA
    GAAAATCAAC TTGAAGATGA TAAGATGATT ATCTTTAGGA ATGTATTGGT CCAAGGGGTG
    ATTGACAAGG CCCAGTTTGG TGAGTATGGT TTGGTGCACA CAGTTCAAGA ATTGTTTGGT
    GCAAAAGCAG CTGGCACCCT GCTCTCTGTT TTCAGTCGTT TATTCACTGC TTATTTGCAG
    ATGCATGGAT TCACATGTGG AGTTGATGAT CTTTTGATAA CGAAAATTAA AGACGACGAA
    AGGAAGAAGC AACTTGAAAA CTGTGAAAAG TGTGGGGAAC AAATTCATCG TAAATTTATC
    GGAATCAAGG ATGAGAACAT TAAGATAGAT CCATTGGAAT TACAATCAAA TATCGAGAAA
    ACTATACGCA GTGATGGTGA GTCTGCCTTG ACATATCTGG ATAGGCAGAT GACAAATGAA
    CTAAATTCCA AAACAAGCTC AGGAGTCATC AATGAGCTGT TGTCTGAAGG GTTGCTAAAA
    CCCTCTGGAA AGAATTGCAT ATCACTTATG ACTACATCTG GGGCTAAAGG TAGCAAGGTC
    AATTTCCAAC AGATATCTTC TTTTCTAGGC CAACAGGAGT TGGAAGGTAA AAGAGTTCCT
    CGAATGGTTT CTGGAAAGAC ATTGCCCTGC TTTCATCCAT GGGATTGGGC AGCCCGTGCT
    GGAGGCTATA TTATTGATCG TTTTCTCACC GGTCTGCGTC CTCAAGAATA TTATTTCCAT
    TGTATGGCTG GTCGTGAAGG GTTGGTTGAT ACAGCTGTCA AAACATCTCG CAGTGGATAC
    CTCCAAAGAT GCCTGATTAA AAATCTTGAG TGCCTCAGAA TCGGCTATGA TCATACAGTT
    CGTGATGCTG ATGGCTCAAT TGTTCAATTT TACTATGGAG AAGATGGTGT GGATGTTCAT
    CAAACGGGCT TTATTGCTAA ATTTGAAGCC TTGGCAGCGA ATCGAGAAAT AATATACGAA
    AAAAGTGATG AGCTTGGCAC ATGTAATGCT TATATTTCGG AATTGCCTAA AGCTCTTAAA
    GAAAAAGCAG AAACATTCCT ACGTAAAATC GCAAAGGAGC AGAGTTCTTT ACATGATCCC
    ACAAAGGATC GGAGTTCTAA TTTAGTGGAA CATGATTTCT ATAAGTTACT GAAGCAAAAG
    TTTTTCACGA GTCTTGCACA ACCAGGAGAA CCAGTTGGTG TCCTTGCTGC TCAGTCTGTA
    GGAGAACCAT CAACACAGAT GACGCTGAAC ACTTTCCATC TAGCCGGGCG TGGTGAAATG
    AATGTAACAC TTGGAATTCC ACGTCTCCAA GAGATTTTGA TGACTGCTTC AGCTGATATC
    AAGACTCCGA TTATGACCTG CCCCTTGCAG GAAGGGAGAA CTAAAGAGGA TGCTGAGCGC
    CTTTCTGATA AGTTGAAGAA GGTCACCGTA GCCGATATAG TAGAGAGCAT GGAAGTATCT
    GTCATGCCAT TTGCTGTTCA GAATGACGAC ATTTGCAGAA TTTATAAGCT TAAAATGAAG
    CTTTATACAC CAGCGCACTA CCCACAACAT GCTGATATAT CAGTAGAAAA TTGGGAAGAA
    ACCCTTGAGG TGTTGTTTGT GAGAGAGTTG GAGGATGCTA TACAAAATCA TCTGGTTTTG
    CTTTCTAAAA TTAGCGGCAT TAAGAATTTT TTGAAGGAAT CACATTCAGG GACGCCAATT
    GAAGCAGAAG AAGATGTTTC TGGCAACATA TCACGCGAGG GTGAAAACGA TGATGATAGT
    GATGATGAAG AAGGGGAAGA GGCTGATGAT CTAGGTTTAG ATGTGCAGAA AAGAAAACAG
    CAAGTTACAG ATGAGATGGA TTATGATGAT GGCTCTGAGG GGGTACTGAA TGAAGATGAA
    GGGGATTTAT CAGGAAGCCA GGCTCCATCT GGATCTGAAA GTGATACTGA ACCGGCTGAT
    AAAGAAAGTG AGATCAGTAA TACCGATATG GTTGACTATG ACAGTGAATA TTTTGAAAAG
    CCAACACATC TTGGAAATTA CTCTAAGCCA AAGTCAAGGA AGAAAACCTC AGAAAGTTCA
    TCACAAGTCG AAATGCATTC TAAGCTAAAG TCAACAGAAA AGAAGAAACA AAAGGCCAAG
    GGAAAGAAAG TTAGATCGAA ATTAGTTAAA AAGGACTTTG ATAGATCAAT CTTTGTGGAA
    GCCAAGGGAT TGCACTTTGA AATCCATCTT AAATTCACCA ATGAACCTCA TATTTTACTG
    GCCGAGATTG CTCAGAAGAC AGCCAAGAAG GTCTGTATCC AGAATCCCGG GAAGGTTCAA
    CGGTGTCAAG TGACTGATTG CAAAGAAAAT CAAGTGATTT ACTATGGGAA AGACCCCAAG
    AGAAGAATTG ATATTGAACC TGGGGAAAAA CAAAAAATCC CAGCGCTTCA TACAATTGGA
    GTGGACTTCA ATACATTTTG GAAAATGCAA GATCACCTTG ATGTTAGGTA TATGTATTCA
    AATAGCATTC ATGGTATGTT GAAAGCTTAT GGAGTAGAGG CCGCAAGAGA GACAATCATT
    AGGGAGATAA AGCACGTGTT CAATTCTTAT GGAATATCCG TTAATACACG GCATTTGTCT
    CTTATTGCTG ATTATATGAC CCATACCGGT GAGTACCGTC CGATGAGCCG TATTGGGGGC
    ATATCAGAGT CGATATCACC TTTAAGTAAA ATGTCTTTTG AGACAGCGTC CAAATTCATA
    GTTGAAGCAG CATTGCACGG GGAGGTCGAT AATTTGGAAG CTCCATCTGC AAGGGTTTGT
    CTTGGATTGC CAGTGAAAAT GGGTACTGGA TCTTTTGATT TGATGCAGAA ACTGGAAATT
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024459466.1
    CDS174..5276
    Translation

    Target ORF information:

    RefSeq Version XM_024603698.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa DNA-directed RNA polymerase I subunit 1 (LOC18099840), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024603698.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    4501
    4561
    4621
    4681
    4741
    4801
    4861
    4921
    4981
    5041
    5101
    ATGGCTGCCC TAGAGGGTGC AACTGTGTCA GTTGATTCGG TAGCGTTTAG CTTCTTAACG 
    GATGAAGAGG TTCATAAGCA TAGTTTTGTA AAGATTACCA GCGCGAGATT GCTTGATACT
    TTGGACAAAC CTGTGCCTGG TGGATTATAT GACCCAGCAA TGGGGCCTCT AGGGGATGAG
    CCTTGCAAAA CATGCGGTCA ACGTTCAACT AATTGCACAG GTCATTGTGG CCATATAGAT
    CTGATTAGTC CAGTTTACAA TCCTCTGCTC TTTAATTTTC TTCACAAACT TCTGCAAAGA
    ACCTGTTTCT TCTGCTTTCA TTTTAGAGCA GATAGCAACC AGGTTGAGAA ATTTGTTTCT
    CAATTGGAAC TCATCATAAA AGGTGATGTT GTTGGGGCTA AAAGGTTGGA TTCTTTCTCG
    CCAATTGAAG CCTCATTGCC AGAAGACAGT GATGGCAGCA GTGAATCTTG TTCTACAATT
    CATTCAGGAG CACGGCATCC AAACAATGAG CAGTCAAAGC AGAGCGAATG GACCTCCCTT
    CAGTTATCTG AAGCAATGTC TATCTTAAAT AATTTTCTGA AGTTGGAATC AAAGAAGTGC
    AAGAACTGTT CAGCATCAAA TCCTAATATT CGGAAGCCTA CTTTTGGTTG GTTTCATTGG
    GCAGGTTTAT CAAATGCAGC TATTAGATCA AATCTGATTA AGCAGCAGAC AATTGAAGGG
    CCATTTGGGG GTGCATTTGA AGAGTTGATA GATGCAGAAG ATGCAACCAA ATCTCCTAGT
    AACAAAGAGT CTGCCACAAA CAGGAATTTG AAAGAACACC AGAAATTGCA ACATCAGTTC
    ACTAGCCAGA AAGATGCTTT GTCCTCGCAG TTATTACCAT CAGAAGCGAT GGATATTTTA
    AAGCTTTTGT GGAAAAATGA AGCTCAACTC TGCTCATTGA TGAGTGACAT TCAGCAGCAA
    GGAGTAGGAA AGAAAAAGGC AGGACATTCT ATGTTCTTTC TGAACACTGT TTTAGTGCCT
    CCAATCAAAT TCAGGCCTCC GACCAAGGGA GGCGACTCTG TGATGGAACA TCCTCTATCT
    GTTTTGCTGA GCAAGGTGCT GGAATTGAAT GGATCTTTGG CAGATGCGCA TAGAAGCAAT
    GATTTCCCAT TAATAGCTAG GCGGTGGTTG GAACTTCAGC AATCTCTAAA TGTCTTGTTT
    GATTCCAATA CTGCCAAGGG TCAGAAGGAT GTGATTTCTG GGATATGCCA GATACTTGAG
    AAAAAGGAGG GTATGTTTCG GCAGAAAATG ATGGGAAAGA GGGTTAATTA TGCATGCCGG
    TCTGTTATTT CCCCAGATCC TTATTTAGAT GTTAACGAAA TTGGAATTCC TCCGTGCTTT
    GCAGTGAAGT TAACATATCC TGAGAGAGTG ACACCCTGGA ATGTTGCCAA ATTGAGAAAT
    GCTGTAATCA ATGGTGCTGA AAGTCATCCT GGAGCTACAC ACTATGTGGA TAAGCTGTCT
    ACTACTAAGC TTCCACTGAA TCGAAAAATG CGTGTTTCTG TAGCAAGGAA ATTATCCGGG
    AGGAGTGTTG ATTATGAATA TGAAGGGAAA ATTGTATATC GCCATTTGCA AGATGGAGAT
    ATTGTGCTTG TCAATCGACA GCCTACACTT CACAAACCAA GTATAATGGC ACATGTAGTT
    CGTGTATTGA AGGGGGAGAA GACACTACGC ATGCACTATG CAAATTGCAG TACATACAAT
    GCTGATTTTG ATGGTGATGA AATGAATGTT CATTTCCCAC AAGATGAAGT TTCTCGAGCT
    GAAGGTTACA ACATTGTTAA TGCAAATAAT CAATATGTCA GGCCTTCCAA TGGCGAACCA
    ATTAGATCCT TGATTCAGGA TCATATTATT AGTGCTGTGC TTTTAACAAA GAAGGACACT
    TTTTTGACTG AGGATGAAGT TTATCAACTG CTTTATAGTT CTGGCGTGTC AAATGCTCGT
    CCAACATCTT TCAGTGGCAA AGCTGGCCGG AAAGTTATAT TCTTAAGTTA TGAAGATGAG
    ATTGAAACCG TTGATCCTGC AATAAGGAAA CCCATTTATC TGTGGTCAGG AAAACAGTTG
    ATTACTGCTG TGTTGAATCA CATTACAAGG GGCCATCCAC CATTCACTGT TGAGAAAGGT
    GGGAAGCTCT CGTATGATTT TTTTAAGAGT AAAATTAAGA ATGGCAAATC TAGCAATGGA
    GAAAAAGTTG GTGTAAGCAA ACCAATGAAG GAAAAAGAGT CTGGCAAAGT CAATCCAAAA
    GAAAATCAAC TTGAAGATGA TAAGATGATT ATCTTTAGGA ATGTATTGGT CCAAGGGGTG
    ATTGACAAGG CCCAGTTTGG TGAGTATGGT TTGGTGCACA CAGTTCAAGA ATTGTTTGGT
    GCAAAAGCAG CTGGCACCCT GCTCTCTGTT TTCAGTCGTT TATTCACTGC TTATTTGCAG
    ATGCATGGAT TCACATGTGG AGTTGATGAT CTTTTGATAA CGAAAATTAA AGACGACGAA
    AGGAAGAAGC AACTTGAAAA CTGTGAAAAG TGTGGGGAAC AAATTCATCG TAAATTTATC
    GGAATCAAGG ATGAGAACAT TAAGATAGAT CCATTGGAAT TACAATCAAA TATCGAGAAA
    ACTATACGCA GTGATGGTGA GTCTGCCTTG ACATATCTGG ATAGGCAGAT GACAAATGAA
    CTAAATTCCA AAACAAGCTC AGGAGTCATC AATGAGCTGT TGTCTGAAGG GTTGCTAAAA
    CCCTCTGGAA AGAATTGCAT ATCACTTATG ACTACATCTG GGGCTAAAGG TAGCAAGGTC
    AATTTCCAAC AGATATCTTC TTTTCTAGGC CAACAGGAGT TGGAAGGTAA AAGAGTTCCT
    CGAATGGTTT CTGGAAAGAC ATTGCCCTGC TTTCATCCAT GGGATTGGGC AGCCCGTGCT
    GGAGGCTATA TTATTGATCG TTTTCTCACC GGTCTGCGTC CTCAAGAATA TTATTTCCAT
    TGTATGGCTG GTCGTGAAGG GTTGGTTGAT ACAGCTGTCA AAACATCTCG CAGTGGATAC
    CTCCAAAGAT GCCTGATTAA AAATCTTGAG TGCCTCAGAA TCGGCTATGA TCATACAGTT
    CGTGATGCTG ATGGCTCAAT TGTTCAATTT TACTATGGAG AAGATGGTGT GGATGTTCAT
    CAAACGGGCT TTATTGCTAA ATTTGAAGCC TTGGCAGCGA ATCGAGAAAT AATATACGAA
    AAAAGTGATG AGCTTGGCAC ATGTAATGCT TATATTTCGG AATTGCCTAA AGCTCTTAAA
    GAAAAAGCAG AAACATTCCT ACGTAAAATC GCAAAGGAGC AGAGTTCTTT ACATGATCCC
    ACAAAGGATC GGAGTTCTAA TTTAGTGGAA CATGATTTCT ATAAGTTACT GAAGCAAAAG
    TTTTTCACGA GTCTTGCACA ACCAGGAGAA CCAGTTGGTG TCCTTGCTGC TCAGTCTGTA
    GGAGAACCAT CAACACAGAT GACGCTGAAC ACTTTCCATC TAGCCGGGCG TGGTGAAATG
    AATGTAACAC TTGGAATTCC ACGTCTCCAA GAGATTTTGA TGACTGCTTC AGCTGATATC
    AAGACTCCGA TTATGACCTG CCCCTTGCAG GAAGGGAGAA CTAAAGAGGA TGCTGAGCGC
    CTTTCTGATA AGTTGAAGAA GGTCACCGTA GCCGATATAG TAGAGAGCAT GGAAGTATCT
    GTCATGCCAT TTGCTGTTCA GAATGACGAC ATTTGCAGAA TTTATAAGCT TAAAATGAAG
    CTTTATACAC CAGCGCACTA CCCACAACAT GCTGATATAT CAGTAGAAAA TTGGGAAGAA
    ACCCTTGAGG TGTTGTTTGT GAGAGAGTTG GAGGATGCTA TACAAAATCA TCTGGTTTTG
    CTTTCTAAAA TTAGCGGCAT TAAGAATTTT TTGAAGGAAT CACATTCAGG GACGCCAATT
    GAAGCAGAAG AAGATGTTTC TGGCAACATA TCACGCGAGG GTGAAAACGA TGATGATAGT
    GATGATGAAG AAGGGGAAGA GGCTGATGAT CTAGGTTTAG ATGTGCAGAA AAGAAAACAG
    CAAGTTACAG ATGAGATGGA TTATGATGAT GGCTCTGAGG GGGTACTGAA TGAAGATGAA
    GGGGATTTAT CAGGAAGCCA GGCTCCATCT GGATCTGAAA GTGATACTGA ACCGGCTGAT
    AAAGAAAGTG AGATCAGTAA TACCGATATG GTTGACTATG ACAGTGAATA TTTTGAAAAG
    CCAACACATC TTGGAAATTA CTCTAAGCCA AAGTCAAGGA AGAAAACCTC AGAAAGTTCA
    TCACAAGTCG AAATGCATTC TAAGCTAAAG TCAACAGAAA AGAAGAAACA AAAGGCCAAG
    GGAAAGAAAG TTAGATCGAA ATTAGTTAAA AAGGACTTTG ATAGATCAAT CTTTGTGGAA
    GCCAAGGGAT TGCACTTTGA AATCCATCTT AAATTCACCA ATGAACCTCA TATTTTACTG
    GCCGAGATTG CTCAGAAGAC AGCCAAGAAG GTCTGTATCC AGAATCCCGG GAAGGTTCAA
    CGGTGTCAAG TGACTGATTG CAAAGAAAAT CAAGTGATTT ACTATGGGAA AGACCCCAAG
    AGAAGAATTG ATATTGAACC TGGGGAAAAA CAAAAAATCC CAGCGCTTCA TACAATTGGA
    GTGGACTTCA ATACATTTTG GAAAATGCAA GATCACCTTG ATGTTAGGTA TATGTATTCA
    AATAGCATTC ATGGTATGTT GAAAGCTTAT GGAGTAGAGG CCGCAAGAGA GACAATCATT
    AGGGAGATAA AGCACGTGTT CAATTCTTAT GGAATATCCG TTAATACACG GCATTTGTCT
    CTTATTGCTG ATTATATGAC CCATACCGGT GAGTACCGTC CGATGAGCCG TATTGGGGGC
    ATATCAGAGT CGATATCACC TTTAAGTAAA ATGTCTTTTG AGACAGCGTC CAAATTCATA
    GTTGAAGCAG CATTGCACGG GGAGGTCGAT AATTTGGAAG CTCCATCTGC AAGGGTTTGT
    CTTGGATTGC CAGTGAAAAT GGGTACTGGA TCTTTTGATT TGATGCAGAA ACTGGAAATT
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D