ORF » Species Summary » Populus trichocarpa » LOC18098782 cDNA ORF clone

LOC18098782 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18098782 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18098782 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa13285 XM_006382533.2
Latest version!		 Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC18098782), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
OPa429924 XM_024601439.1
Latest version!		 Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC18098782), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
View Old Accession Versions >>
OPa13285 XM_006382533.1 Populus trichocarpa hypothetical protein (POPTR_0005s03580g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18098782 ( XM_006382533.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006382595.1 Populus trichocarpa hypothetical protein (POPTR_0005s03580g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa13285
    Clone ID Related Accession (Same CDS sequence) XM_006382533.1 , XM_006382533.2
    Accession Version XM_006382533.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2592bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATCGTTAA TGCTATCGCA TCATGCTGTG CAGGGGACAG TAAGATGAAG 
    ATCAAAGGCA CTGTTGTGTT GATGAAGAAG AATGTCTTAG AATTCAATGA CTTTCATGCT 
    TCGGTTCTTG ATCGTGGCCA TGAGTTGTTA GGCCAAGGAG TCTCTCTGCA AGTCATTGGA 
    ACTGCTAAAA GTGACCCTCC AGAGAATGGT TTGAAAGAGA AGCTAGGAAA GCCGGCAAAT 
    TTAGAGAATT GGATTACTAC CATCGACCCC TTAATCGCCG GCGAGACGGA ATTTAAAGTT 
    ACCTTTGATT GGGATGAGGA GATTGGAATT CCAGTGGCAC TCCTGATAAG AAATAATCAT 
    CACAGTGAAT TCTACCTAAA GACTGTCACA CTAGAAGATG TACCTGGTCA GGGCCGAGTC 
    CACTTTGTCT GCAACTCTTG GATTTATCCT GCAAAGCGTT ACAATTATGA TCGTGTTTTC 
    TTCACTAACA AGACTCATCT GCCGCAGGAC GCACCTGCAC CGCTACGTAA ATACAGGGAA 
    GAAGAACTGG TTAAATTGAG AGGAGATGGA AAAGGAGAGC TTAAGGAATG GGACCGCGTT 
    TACGACTATG CTTACTACAA TGATTTGGGA GATCCTGACG AGGGTGCGAA GTATGTCCGC 
    CCTGTTCTTG GTGGGTCTTC TGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGAGCA 
    GCAACGGAAT CAGATCCCAA CAGTGAGAGC AGGCTGCCAA TTCTGACGAG CTTAAACATC 
    TATGTTCCGA GAGATGAACG ATTTGGTCAC CTGAGGATGG CTGACTTCCT TGGTTATGCA 
    CTGAAACTCG TAGCTCAAGT TGTTAAACCT GGACTGGAAG GATTATTTGA CAGCACCCCA 
    AATGAGTTTG ACTCTTTTGA TGATGTGTTT AAACTCTATG AGGGAGGTAT TGAGCTGCCT 
    CACGGTCCCC TAGTAGATAA TATTAGGGAA AAAATTCCCT TGCAGATGCT CAAGGAGATT 
    TTCCGAACTG ATGGGGAAAA TCTTTTCGAA TTTCCAATGC CTCAAGTGAT TGAAGGGAAT 
    AAGACTGGTT GGAGGACTGA TGAAGAATTT GGCAGAGAAA TGCTGGCTGG ATTAAACCCT 
    GTTGTCATTC GTCGCCTTGA GGAATTCCCC CCGAAAAGCA AGCTAGACAG CAAACAATAT 
    GGTGATCAAA ATAGTAAAAT AACTGAGGAG GACATAAAGA ATAATCTGGA GGGACTGACC 
    ACAGATGAGG CAATCAAGAA AAACAGGATG TTCATATTAG ATCACCATGA TGCACTAATG 
    CCATACCTGA GGAAGATAAA CACTCCTTCA AAAAACACTT ATGCCACAAG GACTCTGCTT 
    TTCTTGAAAG ATGATGGGAC TTTGAAGCCT CTTGTAATTG AGTTAAGCTT GCCCCATGAA 
    GAAGGAGATG AATTTGGAGC CATTAGCAAA ATCTACACCC CAGCTGAACA TGGTGTTGAA 
    GGCTCCATTT GGCAGCTGGC TAAAGCTTAT GTGGGTGTAA ATGACTCCGG CTATCATCAG 
    CTTATCAGCC ACTGGTTACA TACTCATGCT GCAATCGAAC CATTTGTGAT TGCAACAAAT 
    AGACACCTCA GTGTGCTTCA TCCAATATAT GAACTTCTAA AACCTCACTT CCGGGACACA 
    ATGAACATAA ATGCTCTCGC TAGGCAGGTG CTCATCAATG CTGGTGGAAT CCTGGAATTA 
    ACCGTTTATC CTTTGAAGTA TGCCTTGGAA ATGTCAGCAT CACTTTACAA AAGCTGGGAT 
    TTCACCGAGC AAGCACTTCC TGAAGATCTG AAGAAGAGAG GAGTGGCAGT TGAAGATCCA 
    AGTTCTCCTC ATGGTGTCCG CCTACTGATA GAAGATTACC CATATGCTGT CGACGGGCTT 
    GAGATATGGT CCGCAATCAA AGAATGGGTC AGAGACTACT GCTCTTTCTA CTACAAAACT 
    GATGATAGAG TTCAGGAGGA CTATGAAATC CAATCATGGT GGAAGGAAGT GAGAGAGGAA 
    GGGCATGGTG ACCTGAAAGA TGCACCCTGG TGGCCTAAGA TGCAGACTCG TGAAGAGCTA 
    ATAGACTCAT GCACCATAAT CATATGGGTG GCATCAGCCC TCCATGCAGC TATCAACTTT 
    GGGCAATATC CTTTTGGAGG TTTCCTTCCG AATCGTCCAA GCATGAGCCG TAGGTTGATG 
    CCCGAGGAAG GCTCTGCCGA GTATGAGGAG CTCAAGTCGA ACCCTGAGAA GGCTTTCTTG 
    AAAACAATCA CCTCCCAGTA CCAAACACTT CTTGGAATTT CTCTTATAGA AATTCTTTCA 
    AGGCATACAT CAGATGAAGT GTATCTTGGG CAGCGAGACA CTCTTGAATG GACCACAGAC 
    AGTAAACCGA TGGAGGCCTT GGATAAATTT AGAAAGAAAC TGGCAGACAT TGAGAAAAGG 
    ATTTTTGATA TGAACAGAGA TGATAAATTG AAGAATCGCT TTGGCCCAGT CAAGATGCCA 
    TACACTTTGT TGGTTCCTAC CAGTAAAGTT GGACTCACTG GAAGGGGCAT TCCTAACAGT 
    GTTTCGATCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006382595.1
    CDS46..2637
    Translation

    Target ORF information:

    RefSeq Version XM_006382533.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0005s03580g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006382533.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATCGTTAA TGCTATCGCA TCATGCTGTG CAGGGGACAG TAAGATGAAG 
    ATCAAAGGCA CTGTTGTGTT GATGAAGAAG AATGTCTTAG AATTCAATGA CTTTCATGCT 
    TCGGTTCTTG ATCGTGGCCA TGAGTTGTTA GGCCAAGGAG TCTCTCTGCA AGTCATTGGA 
    ACTGCTAAAA GTGACCCTCC AGAGAATGGT TTGAAAGAGA AGCTAGGAAA GCCGGCAAAT 
    TTAGAGAATT GGATTACTAC CATCGACCCC TTAATCGCCG GCGAGACGGA ATTTAAAGTT 
    ACCTTTGATT GGGATGAGGA GATTGGAATT CCAGTGGCAC TCCTGATAAG AAATAATCAT 
    CACAGTGAAT TCTACCTAAA GACTGTCACA CTAGAAGATG TACCTGGTCA GGGCCGAGTC 
    CACTTTGTCT GCAACTCTTG GATTTATCCT GCAAAGCGTT ACAATTATGA TCGTGTTTTC 
    TTCACTAACA AGACTCATCT GCCGCAGGAC GCACCTGCAC CGCTACGTAA ATACAGGGAA 
    GAAGAACTGG TTAAATTGAG AGGAGATGGA AAAGGAGAGC TTAAGGAATG GGACCGCGTT 
    TACGACTATG CTTACTACAA TGATTTGGGA GATCCTGACG AGGGTGCGAA GTATGTCCGC 
    CCTGTTCTTG GTGGGTCTTC TGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGAGCA 
    GCAACGGAAT CAGATCCCAA CAGTGAGAGC AGGCTGCCAA TTCTGACGAG CTTAAACATC 
    TATGTTCCGA GAGATGAACG ATTTGGTCAC CTGAGGATGG CTGACTTCCT TGGTTATGCA 
    CTGAAACTCG TAGCTCAAGT TGTTAAACCT GGACTGGAAG GATTATTTGA CAGCACCCCA 
    AATGAGTTTG ACTCTTTTGA TGATGTGTTT AAACTCTATG AGGGAGGTAT TGAGCTGCCT 
    CACGGTCCCC TAGTAGATAA TATTAGGGAA AAAATTCCCT TGCAGATGCT CAAGGAGATT 
    TTCCGAACTG ATGGGGAAAA TCTTTTCGAA TTTCCAATGC CTCAAGTGAT TGAAGGGAAT 
    AAGACTGGTT GGAGGACTGA TGAAGAATTT GGCAGAGAAA TGCTGGCTGG ATTAAACCCT 
    GTTGTCATTC GTCGCCTTGA GGAATTCCCC CCGAAAAGCA AGCTAGACAG CAAACAATAT 
    GGTGATCAAA ATAGTAAAAT AACTGAGGAG GACATAAAGA ATAATCTGGA GGGACTGACC 
    ACAGATGAGG CAATCAAGAA AAACAGGATG TTCATATTAG ATCACCATGA TGCACTAATG 
    CCATACCTGA GGAAGATAAA CACTCCTTCA AAAAACACTT ATGCCACAAG GACTCTGCTT 
    TTCTTGAAAG ATGATGGGAC TTTGAAGCCT CTTGTAATTG AGTTAAGCTT GCCCCATGAA 
    GAAGGAGATG AATTTGGAGC CATTAGCAAA ATCTACACCC CAGCTGAACA TGGTGTTGAA 
    GGCTCCATTT GGCAGCTGGC TAAAGCTTAT GTGGGTGTAA ATGACTCCGG CTATCATCAG 
    CTTATCAGCC ACTGGTTACA TACTCATGCT GCAATCGAAC CATTTGTGAT TGCAACAAAT 
    AGACACCTCA GTGTGCTTCA TCCAATATAT GAACTTCTAA AACCTCACTT CCGGGACACA 
    ATGAACATAA ATGCTCTCGC TAGGCAGGTG CTCATCAATG CTGGTGGAAT CCTGGAATTA 
    ACCGTTTATC CTTTGAAGTA TGCCTTGGAA ATGTCAGCAT CACTTTACAA AAGCTGGGAT 
    TTCACCGAGC AAGCACTTCC TGAAGATCTG AAGAAGAGAG GAGTGGCAGT TGAAGATCCA 
    AGTTCTCCTC ATGGTGTCCG CCTACTGATA GAAGATTACC CATATGCTGT CGACGGGCTT 
    GAGATATGGT CCGCAATCAA AGAATGGGTC AGAGACTACT GCTCTTTCTA CTACAAAACT 
    GATGATAGAG TTCAGGAGGA CTATGAAATC CAATCATGGT GGAAGGAAGT GAGAGAGGAA 
    GGGCATGGTG ACCTGAAAGA TGCACCCTGG TGGCCTAAGA TGCAGACTCG TGAAGAGCTA 
    ATAGACTCAT GCACCATAAT CATATGGGTG GCATCAGCCC TCCATGCAGC TATCAACTTT 
    GGGCAATATC CTTTTGGAGG TTTCCTTCCG AATCGTCCAA GCATGAGCCG TAGGTTGATG 
    CCCGAGGAAG GCTCTGCCGA GTATGAGGAG CTCAAGTCGA ACCCTGAGAA GGCTTTCTTG 
    AAAACAATCA CCTCCCAGTA CCAAACACTT CTTGGAATTT CTCTTATAGA AATTCTTTCA 
    AGGCATACAT CAGATGAAGT GTATCTTGGG CAGCGAGACA CTCTTGAATG GACCACAGAC 
    AGTAAACCGA TGGAGGCCTT GGATAAATTT AGAAAGAAAC TGGCAGACAT TGAGAAAAGG 
    ATTTTTGATA TGAACAGAGA TGATAAATTG AAGAATCGCT TTGGCCCAGT CAAGATGCCA 
    TACACTTTGT TGGTTCCTAC CAGTAAAGTT GGACTCACTG GAAGGGGCAT TCCTAACAGT 
    GTTTCGATCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18098782 ( XM_006382533.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006382595.1 Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC18098782), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa13285
    Clone ID Related Accession (Same CDS sequence) XM_006382533.1 , XM_006382533.2
    Accession Version XM_006382533.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2592bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable linoleate 9S-lipoxygenase 5 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006382533.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATCGTTAA TGCTATCGCA TCATGCTGTG CAGGGGACAG TAAGATGAAG 
    ATCAAAGGCA CTGTTGTGTT GATGAAGAAG AATGTCTTAG AATTCAATGA CTTTCATGCT 
    TCGGTTCTTG ATCGTGGCCA TGAGTTGTTA GGCCAAGGAG TCTCTCTGCA AGTCATTGGA 
    ACTGCTAAAA GTGACCCTCC AGAGAATGGT TTGAAAGAGA AGCTAGGAAA GCCGGCAAAT 
    TTAGAGAATT GGATTACTAC CATCGACCCC TTAATCGCCG GCGAGACGGA ATTTAAAGTT 
    ACCTTTGATT GGGATGAGGA GATTGGAATT CCAGTGGCAC TCCTGATAAG AAATAATCAT 
    CACAGTGAAT TCTACCTAAA GACTGTCACA CTAGAAGATG TACCTGGTCA GGGCCGAGTC 
    CACTTTGTCT GCAACTCTTG GATTTATCCT GCAAAGCGTT ACAATTATGA TCGTGTTTTC 
    TTCACTAACA AGACTCATCT GCCGCAGGAC GCACCTGCAC CGCTACGTAA ATACAGGGAA 
    GAAGAACTGG TTAAATTGAG AGGAGATGGA AAAGGAGAGC TTAAGGAATG GGACCGCGTT 
    TACGACTATG CTTACTACAA TGATTTGGGA GATCCTGACG AGGGTGCGAA GTATGTCCGC 
    CCTGTTCTTG GTGGGTCTTC TGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGAGCA 
    GCAACGGAAT CAGATCCCAA CAGTGAGAGC AGGCTGCCAA TTCTGACGAG CTTAAACATC 
    TATGTTCCGA GAGATGAACG ATTTGGTCAC CTGAGGATGG CTGACTTCCT TGGTTATGCA 
    CTGAAACTCG TAGCTCAAGT TGTTAAACCT GGACTGGAAG GATTATTTGA CAGCACCCCA 
    AATGAGTTTG ACTCTTTTGA TGATGTGTTT AAACTCTATG AGGGAGGTAT TGAGCTGCCT 
    CACGGTCCCC TAGTAGATAA TATTAGGGAA AAAATTCCCT TGCAGATGCT CAAGGAGATT 
    TTCCGAACTG ATGGGGAAAA TCTTTTCGAA TTTCCAATGC CTCAAGTGAT TGAAGGGAAT 
    AAGACTGGTT GGAGGACTGA TGAAGAATTT GGCAGAGAAA TGCTGGCTGG ATTAAACCCT 
    GTTGTCATTC GTCGCCTTGA GGAATTCCCC CCGAAAAGCA AGCTAGACAG CAAACAATAT 
    GGTGATCAAA ATAGTAAAAT AACTGAGGAG GACATAAAGA ATAATCTGGA GGGACTGACC 
    ACAGATGAGG CAATCAAGAA AAACAGGATG TTCATATTAG ATCACCATGA TGCACTAATG 
    CCATACCTGA GGAAGATAAA CACTCCTTCA AAAAACACTT ATGCCACAAG GACTCTGCTT 
    TTCTTGAAAG ATGATGGGAC TTTGAAGCCT CTTGTAATTG AGTTAAGCTT GCCCCATGAA 
    GAAGGAGATG AATTTGGAGC CATTAGCAAA ATCTACACCC CAGCTGAACA TGGTGTTGAA 
    GGCTCCATTT GGCAGCTGGC TAAAGCTTAT GTGGGTGTAA ATGACTCCGG CTATCATCAG 
    CTTATCAGCC ACTGGTTACA TACTCATGCT GCAATCGAAC CATTTGTGAT TGCAACAAAT 
    AGACACCTCA GTGTGCTTCA TCCAATATAT GAACTTCTAA AACCTCACTT CCGGGACACA 
    ATGAACATAA ATGCTCTCGC TAGGCAGGTG CTCATCAATG CTGGTGGAAT CCTGGAATTA 
    ACCGTTTATC CTTTGAAGTA TGCCTTGGAA ATGTCAGCAT CACTTTACAA AAGCTGGGAT 
    TTCACCGAGC AAGCACTTCC TGAAGATCTG AAGAAGAGAG GAGTGGCAGT TGAAGATCCA 
    AGTTCTCCTC ATGGTGTCCG CCTACTGATA GAAGATTACC CATATGCTGT CGACGGGCTT 
    GAGATATGGT CCGCAATCAA AGAATGGGTC AGAGACTACT GCTCTTTCTA CTACAAAACT 
    GATGATAGAG TTCAGGAGGA CTATGAAATC CAATCATGGT GGAAGGAAGT GAGAGAGGAA 
    GGGCATGGTG ACCTGAAAGA TGCACCCTGG TGGCCTAAGA TGCAGACTCG TGAAGAGCTA 
    ATAGACTCAT GCACCATAAT CATATGGGTG GCATCAGCCC TCCATGCAGC TATCAACTTT 
    GGGCAATATC CTTTTGGAGG TTTCCTTCCG AATCGTCCAA GCATGAGCCG TAGGTTGATG 
    CCCGAGGAAG GCTCTGCCGA GTATGAGGAG CTCAAGTCGA ACCCTGAGAA GGCTTTCTTG 
    AAAACAATCA CCTCCCAGTA CCAAACACTT CTTGGAATTT CTCTTATAGA AATTCTTTCA 
    AGGCATACAT CAGATGAAGT GTATCTTGGG CAGCGAGACA CTCTTGAATG GACCACAGAC 
    AGTAAACCGA TGGAGGCCTT GGATAAATTT AGAAAGAAAC TGGCAGACAT TGAGAAAAGG 
    ATTTTTGATA TGAACAGAGA TGATAAATTG AAGAATCGCT TTGGCCCAGT CAAGATGCCA 
    TACACTTTGT TGGTTCCTAC CAGTAAAGTT GGACTCACTG GAAGGGGCAT TCCTAACAGT 
    GTTTCGATCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006382595.1
    CDS259..2850
    Translation

    Target ORF information:

    RefSeq Version XM_006382533.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC18098782), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006382533.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATCGTTAA TGCTATCGCA TCATGCTGTG CAGGGGACAG TAAGATGAAG 
    ATCAAAGGCA CTGTTGTGTT GATGAAGAAG AATGTCTTAG AATTCAATGA CTTTCATGCT 
    TCGGTTCTTG ATCGTGGCCA TGAGTTGTTA GGCCAAGGAG TCTCTCTGCA AGTCATTGGA 
    ACTGCTAAAA GTGACCCTCC AGAGAATGGT TTGAAAGAGA AGCTAGGAAA GCCGGCAAAT 
    TTAGAGAATT GGATTACTAC CATCGACCCC TTAATCGCCG GCGAGACGGA ATTTAAAGTT 
    ACCTTTGATT GGGATGAGGA GATTGGAATT CCAGTGGCAC TCCTGATAAG AAATAATCAT 
    CACAGTGAAT TCTACCTAAA GACTGTCACA CTAGAAGATG TACCTGGTCA GGGCCGAGTC 
    CACTTTGTCT GCAACTCTTG GATTTATCCT GCAAAGCGTT ACAATTATGA TCGTGTTTTC 
    TTCACTAACA AGACTCATCT GCCGCAGGAC GCACCTGCAC CGCTACGTAA ATACAGGGAA 
    GAAGAACTGG TTAAATTGAG AGGAGATGGA AAAGGAGAGC TTAAGGAATG GGACCGCGTT 
    TACGACTATG CTTACTACAA TGATTTGGGA GATCCTGACG AGGGTGCGAA GTATGTCCGC 
    CCTGTTCTTG GTGGGTCTTC TGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGAGCA 
    GCAACGGAAT CAGATCCCAA CAGTGAGAGC AGGCTGCCAA TTCTGACGAG CTTAAACATC 
    TATGTTCCGA GAGATGAACG ATTTGGTCAC CTGAGGATGG CTGACTTCCT TGGTTATGCA 
    CTGAAACTCG TAGCTCAAGT TGTTAAACCT GGACTGGAAG GATTATTTGA CAGCACCCCA 
    AATGAGTTTG ACTCTTTTGA TGATGTGTTT AAACTCTATG AGGGAGGTAT TGAGCTGCCT 
    CACGGTCCCC TAGTAGATAA TATTAGGGAA AAAATTCCCT TGCAGATGCT CAAGGAGATT 
    TTCCGAACTG ATGGGGAAAA TCTTTTCGAA TTTCCAATGC CTCAAGTGAT TGAAGGGAAT 
    AAGACTGGTT GGAGGACTGA TGAAGAATTT GGCAGAGAAA TGCTGGCTGG ATTAAACCCT 
    GTTGTCATTC GTCGCCTTGA GGAATTCCCC CCGAAAAGCA AGCTAGACAG CAAACAATAT 
    GGTGATCAAA ATAGTAAAAT AACTGAGGAG GACATAAAGA ATAATCTGGA GGGACTGACC 
    ACAGATGAGG CAATCAAGAA AAACAGGATG TTCATATTAG ATCACCATGA TGCACTAATG 
    CCATACCTGA GGAAGATAAA CACTCCTTCA AAAAACACTT ATGCCACAAG GACTCTGCTT 
    TTCTTGAAAG ATGATGGGAC TTTGAAGCCT CTTGTAATTG AGTTAAGCTT GCCCCATGAA 
    GAAGGAGATG AATTTGGAGC CATTAGCAAA ATCTACACCC CAGCTGAACA TGGTGTTGAA 
    GGCTCCATTT GGCAGCTGGC TAAAGCTTAT GTGGGTGTAA ATGACTCCGG CTATCATCAG 
    CTTATCAGCC ACTGGTTACA TACTCATGCT GCAATCGAAC CATTTGTGAT TGCAACAAAT 
    AGACACCTCA GTGTGCTTCA TCCAATATAT GAACTTCTAA AACCTCACTT CCGGGACACA 
    ATGAACATAA ATGCTCTCGC TAGGCAGGTG CTCATCAATG CTGGTGGAAT CCTGGAATTA 
    ACCGTTTATC CTTTGAAGTA TGCCTTGGAA ATGTCAGCAT CACTTTACAA AAGCTGGGAT 
    TTCACCGAGC AAGCACTTCC TGAAGATCTG AAGAAGAGAG GAGTGGCAGT TGAAGATCCA 
    AGTTCTCCTC ATGGTGTCCG CCTACTGATA GAAGATTACC CATATGCTGT CGACGGGCTT 
    GAGATATGGT CCGCAATCAA AGAATGGGTC AGAGACTACT GCTCTTTCTA CTACAAAACT 
    GATGATAGAG TTCAGGAGGA CTATGAAATC CAATCATGGT GGAAGGAAGT GAGAGAGGAA 
    GGGCATGGTG ACCTGAAAGA TGCACCCTGG TGGCCTAAGA TGCAGACTCG TGAAGAGCTA 
    ATAGACTCAT GCACCATAAT CATATGGGTG GCATCAGCCC TCCATGCAGC TATCAACTTT 
    GGGCAATATC CTTTTGGAGG TTTCCTTCCG AATCGTCCAA GCATGAGCCG TAGGTTGATG 
    CCCGAGGAAG GCTCTGCCGA GTATGAGGAG CTCAAGTCGA ACCCTGAGAA GGCTTTCTTG 
    AAAACAATCA CCTCCCAGTA CCAAACACTT CTTGGAATTT CTCTTATAGA AATTCTTTCA 
    AGGCATACAT CAGATGAAGT GTATCTTGGG CAGCGAGACA CTCTTGAATG GACCACAGAC 
    AGTAAACCGA TGGAGGCCTT GGATAAATTT AGAAAGAAAC TGGCAGACAT TGAGAAAAGG 
    ATTTTTGATA TGAACAGAGA TGATAAATTG AAGAATCGCT TTGGCCCAGT CAAGATGCCA 
    TACACTTTGT TGGTTCCTAC CAGTAAAGTT GGACTCACTG GAAGGGGCAT TCCTAACAGT 
    GTTTCGATCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18098782 ( XM_024601439.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024457207.1 Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC18098782), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa429924
    Clone ID Related Accession (Same CDS sequence) XM_024601439.1
    Accession Version XM_024601439.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2592bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable linoleate 9S-lipoxygenase 5 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATTGTTAC TGCTATCGCA TCATGCTGTG CAGGGGACAG TAAGATGAAG 
    ATCAAAGGCA CTGTTGTGTT GATGAAGAAG AATGTCTTAG AATTCAATGA CTTTCATGCT 
    TCGGTTCTTG ATCGTGGCCA TGAGTTGTTA GGCCAAGGAG TCTCTCTGCA AGTCATTAGC 
    GCTGCTAAAA GTGACCCTCC AGAGAATGGT TTGAAAGAGA AGCTAGGAAA GCCGGCAAAT 
    TTAGAGAATT GGATTACTAC CATCGACCCC TTAATCGCCG GCGAGACGGA ATTTAAAGTT 
    ACCTTTGATT GGGATGAGGA GATTGGAATT CCAGTGGCAC TCCTGATAAG AAATAATCAT 
    CACAGTGAAT TCTACCTAAA GACTGTCACA CTAGAAGATG TACCTGGTCA GGGCCGAGTC 
    CACTTTGTCT GCAACTCTTG GATTTATCCT GCAAAGCGTT ACAATTATGA TCGTGTTTTC 
    TTCACTAACA AGACTCATCT GCCGCAGGAC GCACCTGCAC CGCTACGTAA ATACAGGGAA 
    GAAGAACTGG TTAAATTGAG AGGAGATGGA AAAGGAGAGC TTAAGGAATG GGACCGCGTT 
    TACGACTATG CTTACTACAA TGATTTGGGA GATCCTGACG AGGGTGCGAA GTATGTCCGC 
    CCTGTTCTTG GTGGGTCTTC TGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGAGCA 
    GCAACGGAAT CAGATCCCAA CAGTGAGAGC AGGCTGCCAA TTCTGACGAG CTTAAACATC 
    TATGTTCCGA GAGATGAACG ATTTGGTCAC CTGAGGATGG CTGACTTCCT TGGTTATGCA 
    CTGAAACTCG TAGCTCAAGT TGTTAAACCT GGACTGGAAG GATTATTTGA CAGCACCCCA 
    AATGAGTTTG ACTCTTTTGA TGATGTGTTT AAACTCTATG AGGGAGGTAT TGAGCTGCCT 
    CACGGTCCCC TAGTAGATAA TATTAGGGAA AAAATTCCCT TGCAGATGCT CAAGGAGATT 
    TTCCGAACTG ATGGGGAAAA TCTTTTCGAA TTTCCAATGC CTCAAGTGAT TGAAGGGAAT 
    AAGACTGGTT GGAGGACTGA TGAAGAATTT GGCAGAGAAA TGCTGGCTGG ATTAAACCCT 
    GTTGTCATTC GTCGCCTTGA GGAATTCCCC CCGAAAAGCA AGCTAGACAG CAAACAATAT 
    GGTGATCAAA ATAGTAAAAT AACTGAGGAG GACATAAAGA ATAATCTGGA GGGACTGACC 
    ACAGATGAGG CAATCAAGAA AAACAGGATG TTCATATTAG ATCACCATGA TGCACTAATG 
    CCATACCTGA GGAAGATAAA CACTCCTTCA AAAAACACTT ATGCCACAAG GACTCTGCTT 
    TTCTTGAAAG ATGATGGGAC TTTGAAGCCT CTTGTAATTG AGTTAAGCTT GCCCCATGAA 
    GAAGGAGATG AATTTGGAGC CATTAGCAAA ATCTACACCC CAGCTGAACA TGGTGTTGAA 
    GGCTCCATTT GGCAGCTGGC TAAAGCTTAT GTGGGTGTAA ATGACTCCGG CTATCATCAG 
    CTTATCAGCC ACTGGTTACA TACTCATGCT GCAATCGAAC CATTTGTGAT TGCAACAAAT 
    AGACACCTCA GTGTGCTTCA TCCAATATAT GAACTTCTAA AACCTCACTT CCGGGACACA 
    ATGAACATAA ATGCTCTCGC TAGGCAGGTG CTCATCAATG CTGGTGGAAT CCTGGAATTA 
    ACCGTTTATC CTTTGAAGTA TGCCTTGGAA ATGTCAGCAT CACTTTACAA AAGCTGGGAT 
    TTCACCGAGC AAGCACTTCC TGAAGATCTG AAGAAGAGAG GAGTGGCAGT TGAAGATCCA 
    AGTTCTCCTC ATGGTGTCCG CCTACTGATA GAAGATTACC CATATGCTGT CGACGGGCTT 
    GAGATATGGT CCGCAATCAA AGAATGGGTC AGAGACTACT GCTCTTTCTA CTACAAAACT 
    GATGATAGAG TTCAGGAGGA CTATGAAATC CAATCATGGT GGAAGGAAGT GAGAGAGGAA 
    GGGCATGGTG ACCTGAAAGA TGCACCCTGG TGGCCTAAGA TGCAGACTCG TGAAGAGCTA 
    ATAGACTCAT GCACCATAAT CATATGGGTG GCATCAGCCC TCCATGCAGC TATCAACTTT 
    GGGCAATATC CTTTTGGAGG TTTCCTTCCG AATCGTCCAA GCATGAGCCG TAGGTTGATG 
    CCCGAGGAAG GCTCTGCCGA GTATGAGGAG CTCAAGTCGA ACCCTGAGAA GGCTTTCTTG 
    AAAACAATCA CCTCCCAGTA CCAAACACTT CTTGGAATTT CTCTTATAGA AATTCTTTCA 
    AGGCATACAT CAGATGAAGT GTATCTTGGG CAGCGAGACA CTCTTGAATG GACCACAGAC 
    AGTAAACCGA TGGAGGCCTT GGATAAATTT AGAAAGAAAC TGGCAGACAT TGAGAAAAGG 
    ATTTTTGATA TGAACAGAGA TGATAAATTG AAGAATCGCT TTGGCCCAGT CAAGATGCCA 
    TACACTTTGT TGGTTCCTAC CAGTAAAGTT GGACTCACTG GAAGGGGCAT TCCTAACAGT 
    GTTTCGATCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457207.1
    CDS149..2740
    Translation

    Target ORF information:

    RefSeq Version XM_024601439.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC18098782), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601439.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATTGTTAC TGCTATCGCA TCATGCTGTG CAGGGGACAG TAAGATGAAG 
    ATCAAAGGCA CTGTTGTGTT GATGAAGAAG AATGTCTTAG AATTCAATGA CTTTCATGCT 
    TCGGTTCTTG ATCGTGGCCA TGAGTTGTTA GGCCAAGGAG TCTCTCTGCA AGTCATTAGC 
    GCTGCTAAAA GTGACCCTCC AGAGAATGGT TTGAAAGAGA AGCTAGGAAA GCCGGCAAAT 
    TTAGAGAATT GGATTACTAC CATCGACCCC TTAATCGCCG GCGAGACGGA ATTTAAAGTT 
    ACCTTTGATT GGGATGAGGA GATTGGAATT CCAGTGGCAC TCCTGATAAG AAATAATCAT 
    CACAGTGAAT TCTACCTAAA GACTGTCACA CTAGAAGATG TACCTGGTCA GGGCCGAGTC 
    CACTTTGTCT GCAACTCTTG GATTTATCCT GCAAAGCGTT ACAATTATGA TCGTGTTTTC 
    TTCACTAACA AGACTCATCT GCCGCAGGAC GCACCTGCAC CGCTACGTAA ATACAGGGAA 
    GAAGAACTGG TTAAATTGAG AGGAGATGGA AAAGGAGAGC TTAAGGAATG GGACCGCGTT 
    TACGACTATG CTTACTACAA TGATTTGGGA GATCCTGACG AGGGTGCGAA GTATGTCCGC 
    CCTGTTCTTG GTGGGTCTTC TGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGAGCA 
    GCAACGGAAT CAGATCCCAA CAGTGAGAGC AGGCTGCCAA TTCTGACGAG CTTAAACATC 
    TATGTTCCGA GAGATGAACG ATTTGGTCAC CTGAGGATGG CTGACTTCCT TGGTTATGCA 
    CTGAAACTCG TAGCTCAAGT TGTTAAACCT GGACTGGAAG GATTATTTGA CAGCACCCCA 
    AATGAGTTTG ACTCTTTTGA TGATGTGTTT AAACTCTATG AGGGAGGTAT TGAGCTGCCT 
    CACGGTCCCC TAGTAGATAA TATTAGGGAA AAAATTCCCT TGCAGATGCT CAAGGAGATT 
    TTCCGAACTG ATGGGGAAAA TCTTTTCGAA TTTCCAATGC CTCAAGTGAT TGAAGGGAAT 
    AAGACTGGTT GGAGGACTGA TGAAGAATTT GGCAGAGAAA TGCTGGCTGG ATTAAACCCT 
    GTTGTCATTC GTCGCCTTGA GGAATTCCCC CCGAAAAGCA AGCTAGACAG CAAACAATAT 
    GGTGATCAAA ATAGTAAAAT AACTGAGGAG GACATAAAGA ATAATCTGGA GGGACTGACC 
    ACAGATGAGG CAATCAAGAA AAACAGGATG TTCATATTAG ATCACCATGA TGCACTAATG 
    CCATACCTGA GGAAGATAAA CACTCCTTCA AAAAACACTT ATGCCACAAG GACTCTGCTT 
    TTCTTGAAAG ATGATGGGAC TTTGAAGCCT CTTGTAATTG AGTTAAGCTT GCCCCATGAA 
    GAAGGAGATG AATTTGGAGC CATTAGCAAA ATCTACACCC CAGCTGAACA TGGTGTTGAA 
    GGCTCCATTT GGCAGCTGGC TAAAGCTTAT GTGGGTGTAA ATGACTCCGG CTATCATCAG 
    CTTATCAGCC ACTGGTTACA TACTCATGCT GCAATCGAAC CATTTGTGAT TGCAACAAAT 
    AGACACCTCA GTGTGCTTCA TCCAATATAT GAACTTCTAA AACCTCACTT CCGGGACACA 
    ATGAACATAA ATGCTCTCGC TAGGCAGGTG CTCATCAATG CTGGTGGAAT CCTGGAATTA 
    ACCGTTTATC CTTTGAAGTA TGCCTTGGAA ATGTCAGCAT CACTTTACAA AAGCTGGGAT 
    TTCACCGAGC AAGCACTTCC TGAAGATCTG AAGAAGAGAG GAGTGGCAGT TGAAGATCCA 
    AGTTCTCCTC ATGGTGTCCG CCTACTGATA GAAGATTACC CATATGCTGT CGACGGGCTT 
    GAGATATGGT CCGCAATCAA AGAATGGGTC AGAGACTACT GCTCTTTCTA CTACAAAACT 
    GATGATAGAG TTCAGGAGGA CTATGAAATC CAATCATGGT GGAAGGAAGT GAGAGAGGAA 
    GGGCATGGTG ACCTGAAAGA TGCACCCTGG TGGCCTAAGA TGCAGACTCG TGAAGAGCTA 
    ATAGACTCAT GCACCATAAT CATATGGGTG GCATCAGCCC TCCATGCAGC TATCAACTTT 
    GGGCAATATC CTTTTGGAGG TTTCCTTCCG AATCGTCCAA GCATGAGCCG TAGGTTGATG 
    CCCGAGGAAG GCTCTGCCGA GTATGAGGAG CTCAAGTCGA ACCCTGAGAA GGCTTTCTTG 
    AAAACAATCA CCTCCCAGTA CCAAACACTT CTTGGAATTT CTCTTATAGA AATTCTTTCA 
    AGGCATACAT CAGATGAAGT GTATCTTGGG CAGCGAGACA CTCTTGAATG GACCACAGAC 
    AGTAAACCGA TGGAGGCCTT GGATAAATTT AGAAAGAAAC TGGCAGACAT TGAGAAAAGG 
    ATTTTTGATA TGAACAGAGA TGATAAATTG AAGAATCGCT TTGGCCCAGT CAAGATGCCA 
    TACACTTTGT TGGTTCCTAC CAGTAAAGTT GGACTCACTG GAAGGGGCAT TCCTAACAGT 
    GTTTCGATCT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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