ORF » Species Summary » Populus trichocarpa » LOC18096087 cDNA ORF clone

LOC18096087 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18096087 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18096087 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa06799 XM_006386104.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0002s01940g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa424485 XM_006386104.2
Latest version!		 Populus trichocarpa probable 26S proteasome non-ATPase regulatory subunit 3 (LOC18096087), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18096087 ( XM_006386104.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006386166.1 Populus trichocarpa hypothetical protein (POPTR_0002s01940g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa06799
    Clone ID Related Accession (Same CDS sequence) XM_006386104.1
    Accession Version XM_006386104.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1446bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGTCTCAAG ATTCAGAGAT TAACAGCAAC TCCACTGCTT CATCTTACAC CTCAGCTTTC 
    ATTTCCACTT ATGAAAGCTT GATGAAAATA GTATCACATA TTGAGCTTAG CTCGGATGTT 
    CTCCGAACAG CTCGTGCTGT TCGACTTACG AATTGCTTGA GGAAGAACCT GACAGAAGAT 
    ACTTTAATTC AATATCTGCT GCATTTTGGT CTTTTGAAGA ATTCTGAACT GAATGCTCGA 
    TTATCTTCAT TTCTAATTAT CGAGGAAGAT GAGGAAGCCG ATTCTGCAAT GTCTGTTTGC 
    GCGATAGAAT TTTCGCTAGA GCTTGAGTTT TACTGTTACT TTCTTGTGCT GATATTTCTG 
    ATTGATCAGA AAAGATATAA TAAGGCTAAA GTTTGTTCAT TGGATGGCAT TACTCGAGTG 
    ATGAGCCTAA ACATGGCAGA GCTTGACTCT GTTAGTGTTC TAGCAGCTAG GCTGTATTTC 
    TATTACTCGT ATAGCTATGA GGTCTCAGGT GATCTTGCTG AAATTCGTTG GAACCTCCTT 
    GACTGGTATA GCGTAGCCGC TTTGAACCAT GATGAGCTGG GACAGGAAAC ACTTCTCAAT 
    CTGTTGCTTC GTAATTACCT GCATTACAAC CTATATGATC AGGCAGAGAA ATTGAGGTCA 
    AAGGCACCAA AATTTCTATC ACGCTCAAGT CAGCAGACTC GCCGATACTT GTTTTATACT 
    GGAAAGATTC AGACGATTCG ACTGGCATAT ACTGATGCAA AAGAAAGTTT CCTGCAAGCT 
    GTTTGGAGAG GTCCAGTTGC AGCTCGTGGC TTTCGAATTC AATGTACAAA GTGGACTGTC 
    CTAGTTCGTT TACTACTGGG AGAAATACCT GAGAGGACAG TTTTTATGCA GAGTGGAATG 
    GAAAGGACTT TGAGGCCATA CTTCGAGCTT ACAAATGCTG TACGAATTGG TGACCTGGAG 
    CTGTTCGGTA ATGTCGCAGA AGAGTTTGCT GGCACTTTCA TATCAGACGG AACAAAAAAT 
    TTGATTGTTC GACTGCAACA TAGTGTCATC AGGACTGGAC TGCGCAGCAT CAGCATCTCC 
    TATTCCAGCA TCTCACTTGC AGAAGTAGCT GATAAATTGA AGATGCATTC CAGAAACCTG 
    CTTGCAGATG TCGAAAACGT TGTGGCAAAG GCCATCCGCG ATGGAGCAAT TAACGCTAAG 
    ATTGATCATG CAAATGGGTG GCTGATATCG AAGGAGACTC GAGACATTTA CGCTACAGCC 
    GAGCCACAGG TTGCCTTCAG CTCTAGGATT TCTTTCTATC TTAACTTGTA CAATGAGACT 
    GTCCGGGCTT TGCTCCTCCC ATCAGGCAAT GATATGCATG GCAATAGGAG ATCAGCAAGT 
    CAAGTACTCT ATGGAGAATT ACTTGAACTA TTAGAAGAGG TGAGGGGTAA GTATCTTAAG 
    AAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006386166.1
    CDS1..1446
    Translation

    Target ORF information:

    RefSeq Version XM_006386104.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0002s01940g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006386104.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGTCTCAAG ATTCAGAGAT TAACAGCAAC TCCACTGCTT CATCTTACAC CTCAGCTTTC 
    ATTTCCACTT ATGAAAGCTT GATGAAAATA GTATCACATA TTGAGCTTAG CTCGGATGTT 
    CTCCGAACAG CTCGTGCTGT TCGACTTACG AATTGCTTGA GGAAGAACCT GACAGAAGAT 
    ACTTTAATTC AATATCTGCT GCATTTTGGT CTTTTGAAGA ATTCTGAACT GAATGCTCGA 
    TTATCTTCAT TTCTAATTAT CGAGGAAGAT GAGGAAGCCG ATTCTGCAAT GTCTGTTTGC 
    GCGATAGAAT TTTCGCTAGA GCTTGAGTTT TACTGTTACT TTCTTGTGCT GATATTTCTG 
    ATTGATCAGA AAAGATATAA TAAGGCTAAA GTTTGTTCAT TGGATGGCAT TACTCGAGTG 
    ATGAGCCTAA ACATGGCAGA GCTTGACTCT GTTAGTGTTC TAGCAGCTAG GCTGTATTTC 
    TATTACTCGT ATAGCTATGA GGTCTCAGGT GATCTTGCTG AAATTCGTTG GAACCTCCTT 
    GACTGGTATA GCGTAGCCGC TTTGAACCAT GATGAGCTGG GACAGGAAAC ACTTCTCAAT 
    CTGTTGCTTC GTAATTACCT GCATTACAAC CTATATGATC AGGCAGAGAA ATTGAGGTCA 
    AAGGCACCAA AATTTCTATC ACGCTCAAGT CAGCAGACTC GCCGATACTT GTTTTATACT 
    GGAAAGATTC AGACGATTCG ACTGGCATAT ACTGATGCAA AAGAAAGTTT CCTGCAAGCT 
    GTTTGGAGAG GTCCAGTTGC AGCTCGTGGC TTTCGAATTC AATGTACAAA GTGGACTGTC 
    CTAGTTCGTT TACTACTGGG AGAAATACCT GAGAGGACAG TTTTTATGCA GAGTGGAATG 
    GAAAGGACTT TGAGGCCATA CTTCGAGCTT ACAAATGCTG TACGAATTGG TGACCTGGAG 
    CTGTTCGGTA ATGTCGCAGA AGAGTTTGCT GGCACTTTCA TATCAGACGG AACAAAAAAT 
    TTGATTGTTC GACTGCAACA TAGTGTCATC AGGACTGGAC TGCGCAGCAT CAGCATCTCC 
    TATTCCAGCA TCTCACTTGC AGAAGTAGCT GATAAATTGA AGATGCATTC CAGAAACCTG 
    CTTGCAGATG TCGAAAACGT TGTGGCAAAG GCCATCCGCG ATGGAGCAAT TAACGCTAAG 
    ATTGATCATG CAAATGGGTG GCTGATATCG AAGGAGACTC GAGACATTTA CGCTACAGCC 
    GAGCCACAGG TTGCCTTCAG CTCTAGGATT TCTTTCTATC TTAACTTGTA CAATGAGACT 
    GTCCGGGCTT TGCTCCTCCC ATCAGGCAAT GATATGCATG GCAATAGGAG ATCAGCAAGT 
    CAAGTACTCT ATGGAGAATT ACTTGAACTA TTAGAAGAGG TGAGGGGTAA GTATCTTAAG 
    AAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18096087 ( XM_006386104.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006386166.2 Populus trichocarpa probable 26S proteasome non-ATPase regulatory subunit 3 (LOC18096087), mRNA.
    Price & Availability↑
    CloneID OPa424485
    Clone ID Related Accession (Same CDS sequence) XM_006386104.2
    Accession Version XM_006386104.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1446bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable 26S proteasome non-ATPase regulatory subunit 3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006386104.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGTCTCCAG ATTCAGAGAT TAACAGCAAC TCCACTGCTT CATCTTACAC CTCAGCTTTC 
    ATTTCCACTT ATGAAAGCTT GATGAAAATA GTATCACATA TTGAGCTTAG CTCGGATGTT 
    CTCCGAACAG CTCGTGCTGT TCGACTTACG AATTGCTTGA GGAAGAACCT GACAGAAGAT 
    ACTTTAATTC AATATCTGCT GCATTTTGGT CTTTTGAAGA ATTCTGAACT GAATGCTCGA 
    TTATCTTCAT TTCTAATTAT CGAGGAAGAT GAGGAAGCCG ATTCTGCAAT GTCTGTTTGC 
    GCGATAGAAT TTTCGCTAGA GCTTGAGTTT TACTGTTACT TTCTTGTGCT GATATTTCTG 
    ATTGATCAGA AAAGATATAA TAAGGCTAAA GTTTGTTCAT TGGATGGCAT TACTCGAGTG 
    ATGAGCCTAA ACATGGCAGA GCTTGACTCT GTTAGTGTTC TAGCAGCTAG GCTGTATTTC 
    TATTACTCGT ATAGCTATGA GGTCTCAGGT GATCTTGCTG AAATTCGTTG GAACCTCCTT 
    GACTGGTATA GCGTAGCCGC TTTGAACCAT GATGAGCTGG GACAGGAAAC ACTTCTCAAT 
    CTGTTGCTTC GTAATTACCT GCATTACAAC CTATATGATC AGGCAGAGAA ATTGAGGTCA 
    AAGGCACCAA AATTTCTATC ACGCTCAAGT CAGCAGACTC GCCGATACTT GTTTTATACT 
    GGAAAGATTC AGACGATTCG ACTGGCATAT ACTGATGCAA AAGAAAGTTT CCTGCAAGCT 
    GTTTGGAGAG GTCCAGTTGC AGCTCGTGGC TTTCGAATTC AATGTACAAA GTGGACTGTC 
    CTAGTTCGTT TACTACTGGG AGAAATACCT GAGAGGACAG TTTTTATGCA GAGTGGAATG 
    GAAAGGACTT TGAGGCCATA CTTCGAGCTT ACAAATGCTG TACGAATTGG TGACCTGGAG 
    CTGTTCGGTA ATGTCGCAGA AGAGTTTGCT GGCACTTTCA TATCAGACGG AACAAAAAAT 
    TTGATTGTTC GACTGCAACA TAGTGTCATC AGGACTGGAC TGCGCAGCAT CAGCATCTCC 
    TATTCCAGCA TCTCACTTGC AGAAGTAGCT GATAAATTGA AGATGCATTC CAGAAACCTG 
    CTTGCAGATG TCGAAAACGT TGTGGCAAAG GCCATCCGCG ATGGAGCAAT TAACGCTAAG 
    ATTGATCATG CAAATGGGTG GCTGATATCG AAGGAGACTC GAGACATTTA CGCTACAGCC 
    GAGCCACAGG TTGCCTTCAG CTCTAGGATT TCTTTCTATC TTAACTTGTA CAATGAGACT 
    GTCCGGGCTT TGCTCCTCCC ATCAGGCAAT GATATGCATG GCAATAGGAG ATCAGCAAGT 
    CAAGTACTCT ATGGAGAATT ACTTGAACTA TTAGAAGAGG TGAGGGGTAA GTATCTTAAG 
    AAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006386166.2
    CDS132..1577
    Translation

    Target ORF information:

    RefSeq Version XM_006386104.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable 26S proteasome non-ATPase regulatory subunit 3 (LOC18096087), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006386104.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGTCTCCAG ATTCAGAGAT TAACAGCAAC TCCACTGCTT CATCTTACAC CTCAGCTTTC 
    ATTTCCACTT ATGAAAGCTT GATGAAAATA GTATCACATA TTGAGCTTAG CTCGGATGTT 
    CTCCGAACAG CTCGTGCTGT TCGACTTACG AATTGCTTGA GGAAGAACCT GACAGAAGAT 
    ACTTTAATTC AATATCTGCT GCATTTTGGT CTTTTGAAGA ATTCTGAACT GAATGCTCGA 
    TTATCTTCAT TTCTAATTAT CGAGGAAGAT GAGGAAGCCG ATTCTGCAAT GTCTGTTTGC 
    GCGATAGAAT TTTCGCTAGA GCTTGAGTTT TACTGTTACT TTCTTGTGCT GATATTTCTG 
    ATTGATCAGA AAAGATATAA TAAGGCTAAA GTTTGTTCAT TGGATGGCAT TACTCGAGTG 
    ATGAGCCTAA ACATGGCAGA GCTTGACTCT GTTAGTGTTC TAGCAGCTAG GCTGTATTTC 
    TATTACTCGT ATAGCTATGA GGTCTCAGGT GATCTTGCTG AAATTCGTTG GAACCTCCTT 
    GACTGGTATA GCGTAGCCGC TTTGAACCAT GATGAGCTGG GACAGGAAAC ACTTCTCAAT 
    CTGTTGCTTC GTAATTACCT GCATTACAAC CTATATGATC AGGCAGAGAA ATTGAGGTCA 
    AAGGCACCAA AATTTCTATC ACGCTCAAGT CAGCAGACTC GCCGATACTT GTTTTATACT 
    GGAAAGATTC AGACGATTCG ACTGGCATAT ACTGATGCAA AAGAAAGTTT CCTGCAAGCT 
    GTTTGGAGAG GTCCAGTTGC AGCTCGTGGC TTTCGAATTC AATGTACAAA GTGGACTGTC 
    CTAGTTCGTT TACTACTGGG AGAAATACCT GAGAGGACAG TTTTTATGCA GAGTGGAATG 
    GAAAGGACTT TGAGGCCATA CTTCGAGCTT ACAAATGCTG TACGAATTGG TGACCTGGAG 
    CTGTTCGGTA ATGTCGCAGA AGAGTTTGCT GGCACTTTCA TATCAGACGG AACAAAAAAT 
    TTGATTGTTC GACTGCAACA TAGTGTCATC AGGACTGGAC TGCGCAGCAT CAGCATCTCC 
    TATTCCAGCA TCTCACTTGC AGAAGTAGCT GATAAATTGA AGATGCATTC CAGAAACCTG 
    CTTGCAGATG TCGAAAACGT TGTGGCAAAG GCCATCCGCG ATGGAGCAAT TAACGCTAAG 
    ATTGATCATG CAAATGGGTG GCTGATATCG AAGGAGACTC GAGACATTTA CGCTACAGCC 
    GAGCCACAGG TTGCCTTCAG CTCTAGGATT TCTTTCTATC TTAACTTGTA CAATGAGACT 
    GTCCGGGCTT TGCTCCTCCC ATCAGGCAAT GATATGCATG GCAATAGGAG ATCAGCAAGT 
    CAAGTACTCT ATGGAGAATT ACTTGAACTA TTAGAAGAGG TGAGGGGTAA GTATCTTAAG 
    AAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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