ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_47179 cDNA ORF clone

PHATRDRAFT_47179 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_47179 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_47179 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb07408 XM_002181393.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_47179 ( XM_002181393.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002181429.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb07408
    Clone ID Related Accession (Same CDS sequence) XM_002181393.1
    Accession Version XM_002181393.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2709bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011680). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    ATGGCGAGCC GTACCCATAC AGTACCTTCG TTAGATCGAT GTCGACGTCG TCGGGTAATT 
    GTTGATTCAT CCGGCAGCGA TAGTGGAGAT GGTACGGAAG TCGAAGTCTT TCCGTTGTCG 
    CGTCCGACCC GTTGGCTCGG TGATGACGAT TTTTCCGATA CTTCCTCATC CTTGGAAGGG 
    CACCTTCGTA AATTGGATTT GAAGCACTCA CGTTTGGACG ATGAGATTCA AAGGTTAGCT 
    CGAGCATCGA TAGACGGCGC TGTTCGGGAT ACAGTGGAAG AGTCGTTTGA CCTTTCCATA 
    GGAGACTCGA GTTCCAGTGG AAGCGTGGAT GGCCCAAATC TTTGCGAAAA AGAGGATCCC 
    ACAGAGCTTC CATTGGGTTC CAACTGGATT TGTGATCGGA AAAGCAATGA AATGTTATTG 
    CGTGCCCAGG AAAGCGACAC AACAGAAGTC GACTGGCCAG ATCTGCGCAT ACCTCGTGGG 
    CTCTTTCAAA AGCTTTTTGA CTACCAGAAA AGTGGTGTCC AGTGGATGGG GACACTCCAT 
    CAGGTTGGCA TCGGAGGTGT GCTAGGAGAT GATATGGGAA TGGGTAAAAC ATACATGGCA 
    TTGACCTTCT TAGGAGGATT GATGCGAACT GGCGTAATAC GGAACGCACT CATCGTTTCA 
    CCTGTCTCTG TTTTACGCTC CTGGGAAAAA GAGGCCCAGA ATGTTTTGAC CCAGTGCGTT 
    CACGATGTTC GCATTGCTGT CCTTTCCAGC ACCCAGAGTC AACAGCGCGA TAGAATTTTG 
    CTTAAAGCCT TGGAAGACGA ATCGTCAAAT TATTTGATTA TTACGAGTTA CGGACAAGTC 
    CGGTCGGCCA CTTTGAGTTT CGTTCAAAGT GATTGCTGTT TCGACTACGT GGTGCTGGAT 
    GAGGGTCACC AAATCAAGAA TCCTACCAGC GCAACCAGTC GGGCTTGTCG CCGGATCTGC 
    CGCAGTCGCG AGACGCATCG GCTCTTGCTG ACAGGAACGC CTATACTCAA CAATCTTAAG 
    GAACTCTGGG CACTTTTTGA TTGGGCAACG AGTGGGCAGA TTCTCAACAA GCTGAAAACT 
    TTCACGAATT ACTTCGCTCG ACCAATCGAA GACGCTCGCA ACAAGAATGC GACAACACAT 
    GCAATCAAAC TGGGACAACG GGTGAACAAG GAACTTCAGG AGAAGCTCAA GCCGTACTTT 
    CTGCAACGCC TCAAAGTTGA CTTTCTCATA GACAAACTTC CGTCGAAAAA CGAACTTGTT 
    GTTTGGACGC ATTTGAGTTC AAAACAGCGT ACAATGTACT CCGACTTCGT GGACTCCAAG 
    GAATCAGTGG TAAGCTCGAT CCTTTCTGGT GAAACCAGAT CGCCGTTGGA AGCCGTTACA 
    TGGCTGAAAA AGCTCTGCGG GCATCCTATT CTAGCAGAAG AACTCGCAAT CAATGTTGGA 
    CGTTTACTTG CTACGGCCAG TCCTGATGAT TTGGTCCAGC AATCGGCCAA GCTCTGTATT 
    CTCTTGTCGT TGATCGAAAA CTTTCGCCAG AACGGCCATC GAACCCTCAT TTTCTCGCAG 
    AGTACGAAAA TGTTGGATAT CATAGAGAAA ACGCTTCTAT CCGAGGGGGT GGAACTGTTG 
    CGTATTGACG GTAGCTCCAA AGAACAAGAC CGACAGCGTT TTGTGGACGA CTTCAACTCA 
    AACACTTCCA CAACGGACGC GATGCTACTG TCAACCAAAG CAGCTGGGGT CGGCCTTACC 
    CTCGTTGGTG CCGACCGAGT GATTATTTAC GATCCAAGCT GGTACGTCTC AGAAGCTCGT 
    TTCGCGTTGC AAGAGCAGCG CCACCTGGAA TGTGCTATTG CTGTGACACT ATTGTTGTTC 
    TCACTCCTTT CCAATAGGAC TCCTGCCGAA GACTCACAGG CTGTGGATCG CTGCTATCGG 
    ATTGGCCAGA CTCGTGACGT TGTGGTGTAT CGCTTGATCG CTGCTGGTAC CGTGGAGGAA 
    AAGATGTATG AGAAGCAAGT GCACAAGGAT GGAATCCGTC GTACTGTGTT CACAGAAGAC 
    ACGTCGGTGG AGCGCTATTT CGACAAACTA GAGTTGCGCA AGCTCTTTGC GCTGGGAGCT 
    CCGGGTGTTT GCGAGGTCAT GGAGAAAGTG CAGAAAGCAA CGCAAGGCGT CGAGAGCAAG 
    TGGGATCAGC ACGAATTCGT CCTGTCACAA AGTGGGGTTG TTGGTCTATC CCGTCACGAC 
    GGCTTTTACT CGCAAGCCGC CGAAGAGATT TCTGACAACG AAGAACCCCA CGAGCCGTTG 
    TTCTCGGGCA AAGCTGCGGG TGCGCAAGTA TTTGGTCGCG CACAGCGCAT TCTAGAGAAA 
    GAAAGCTATT CCCAAGTCCG GGCACGTCGC CAAGCCCGTC AGCACTTGTC GAACCAGGTT 
    GCTGTGGAGG GTGACAAGGA AAACGCTGCC GTACAGGTCT CCGTGACGGA TTCTGGTTGC 
    AACCCCAATG GTGCTGTGGG AAAAGACACG CCCACGGAAT TGCCGGTACG CACTGAAACC 
    GAAGTGGCGC CTTGTGACGT ACTACAGCAC GTGGAGGAGC TGTTGACTAA TGGGCAGCCC 
    AAGCGTGCCA TGGAGATCAT GGTGGAATTG TTGGAAGGTC GGTACGATGA GTTGAGCAAG 
    GATGAACGGA TGCAGCTACA CCAACAATGT TCAGATACTG CCGTGTTGCT AGGCATTTCC 
    TTTTCGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002181429.1
    CDS1..2709
    Translation

    Target ORF information:

    RefSeq Version XM_002181393.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002181393.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    ATGGCGAGCC GTACCCATAC AGTACCTTCG TTAGATCGAT GTCGACGTCG TCGGGTAATT 
    GTTGATTCAT CCGGCAGCGA TAGTGGAGAT GGTACGGAAG TCGAAGTCTT TCCGTTGTCG 
    CGTCCGACCC GTTGGCTCGG TGATGACGAT TTTTCCGATA CTTCCTCATC CTTGGAAGGG 
    CACCTTCGTA AATTGGATTT GAAGCACTCA CGTTTGGACG ATGAGATTCA AAGGTTAGCT 
    CGAGCATCGA TAGACGGCGC TGTTCGGGAT ACAGTGGAAG AGTCGTTTGA CCTTTCCATA 
    GGAGACTCGA GTTCCAGTGG AAGCGTGGAT GGCCCAAATC TTTGCGAAAA AGAGGATCCC 
    ACAGAGCTTC CATTGGGTTC CAACTGGATT TGTGATCGGA AAAGCAATGA AATGTTATTG 
    CGTGCCCAGG AAAGCGACAC AACAGAAGTC GACTGGCCAG ATCTGCGCAT ACCTCGTGGG 
    CTCTTTCAAA AGCTTTTTGA CTACCAGAAA AGTGGTGTCC AGTGGATGGG GACACTCCAT 
    CAGGTTGGCA TCGGAGGTGT GCTAGGAGAT GATATGGGAA TGGGTAAAAC ATACATGGCA 
    TTGACCTTCT TAGGAGGATT GATGCGAACT GGCGTAATAC GGAACGCACT CATCGTTTCA 
    CCTGTCTCTG TTTTACGCTC CTGGGAAAAA GAGGCCCAGA ATGTTTTGAC CCAGTGCGTT 
    CACGATGTTC GCATTGCTGT CCTTTCCAGC ACCCAGAGTC AACAGCGCGA TAGAATTTTG 
    CTTAAAGCCT TGGAAGACGA ATCGTCAAAT TATTTGATTA TTACGAGTTA CGGACAAGTC 
    CGGTCGGCCA CTTTGAGTTT CGTTCAAAGT GATTGCTGTT TCGACTACGT GGTGCTGGAT 
    GAGGGTCACC AAATCAAGAA TCCTACCAGC GCAACCAGTC GGGCTTGTCG CCGGATCTGC 
    CGCAGTCGCG AGACGCATCG GCTCTTGCTG ACAGGAACGC CTATACTCAA CAATCTTAAG 
    GAACTCTGGG CACTTTTTGA TTGGGCAACG AGTGGGCAGA TTCTCAACAA GCTGAAAACT 
    TTCACGAATT ACTTCGCTCG ACCAATCGAA GACGCTCGCA ACAAGAATGC GACAACACAT 
    GCAATCAAAC TGGGACAACG GGTGAACAAG GAACTTCAGG AGAAGCTCAA GCCGTACTTT 
    CTGCAACGCC TCAAAGTTGA CTTTCTCATA GACAAACTTC CGTCGAAAAA CGAACTTGTT 
    GTTTGGACGC ATTTGAGTTC AAAACAGCGT ACAATGTACT CCGACTTCGT GGACTCCAAG 
    GAATCAGTGG TAAGCTCGAT CCTTTCTGGT GAAACCAGAT CGCCGTTGGA AGCCGTTACA 
    TGGCTGAAAA AGCTCTGCGG GCATCCTATT CTAGCAGAAG AACTCGCAAT CAATGTTGGA 
    CGTTTACTTG CTACGGCCAG TCCTGATGAT TTGGTCCAGC AATCGGCCAA GCTCTGTATT 
    CTCTTGTCGT TGATCGAAAA CTTTCGCCAG AACGGCCATC GAACCCTCAT TTTCTCGCAG 
    AGTACGAAAA TGTTGGATAT CATAGAGAAA ACGCTTCTAT CCGAGGGGGT GGAACTGTTG 
    CGTATTGACG GTAGCTCCAA AGAACAAGAC CGACAGCGTT TTGTGGACGA CTTCAACTCA 
    AACACTTCCA CAACGGACGC GATGCTACTG TCAACCAAAG CAGCTGGGGT CGGCCTTACC 
    CTCGTTGGTG CCGACCGAGT GATTATTTAC GATCCAAGCT GGTACGTCTC AGAAGCTCGT 
    TTCGCGTTGC AAGAGCAGCG CCACCTGGAA TGTGCTATTG CTGTGACACT ATTGTTGTTC 
    TCACTCCTTT CCAATAGGAC TCCTGCCGAA GACTCACAGG CTGTGGATCG CTGCTATCGG 
    ATTGGCCAGA CTCGTGACGT TGTGGTGTAT CGCTTGATCG CTGCTGGTAC CGTGGAGGAA 
    AAGATGTATG AGAAGCAAGT GCACAAGGAT GGAATCCGTC GTACTGTGTT CACAGAAGAC 
    ACGTCGGTGG AGCGCTATTT CGACAAACTA GAGTTGCGCA AGCTCTTTGC GCTGGGAGCT 
    CCGGGTGTTT GCGAGGTCAT GGAGAAAGTG CAGAAAGCAA CGCAAGGCGT CGAGAGCAAG 
    TGGGATCAGC ACGAATTCGT CCTGTCACAA AGTGGGGTTG TTGGTCTATC CCGTCACGAC 
    GGCTTTTACT CGCAAGCCGC CGAAGAGATT TCTGACAACG AAGAACCCCA CGAGCCGTTG 
    TTCTCGGGCA AAGCTGCGGG TGCGCAAGTA TTTGGTCGCG CACAGCGCAT TCTAGAGAAA 
    GAAAGCTATT CCCAAGTCCG GGCACGTCGC CAAGCCCGTC AGCACTTGTC GAACCAGGTT 
    GCTGTGGAGG GTGACAAGGA AAACGCTGCC GTACAGGTCT CCGTGACGGA TTCTGGTTGC 
    AACCCCAATG GTGCTGTGGG AAAAGACACG CCCACGGAAT TGCCGGTACG CACTGAAACC 
    GAAGTGGCGC CTTGTGACGT ACTACAGCAC GTGGAGGAGC TGTTGACTAA TGGGCAGCCC 
    AAGCGTGCCA TGGAGATCAT GGTGGAATTG TTGGAAGGTC GGTACGATGA GTTGAGCAAG 
    GATGAACGGA TGCAGCTACA CCAACAATGT TCAGATACTG CCGTGTTGCT AGGCATTTCC 
    TTTTCGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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