LINJ_11_0880 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_11_0880
Entrez Gene ID	5067266
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001463851.1	XP_001463888.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_11_0880 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_11_0880 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc01166	XM_001463851.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_11_0880 ( XM_001463851.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001463888.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc01166
Clone ID Related Accession (Same CDS sequence)	XM_001463851.1
Accession Version	XM_001463851.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009395). COMPLETENESS: incomplete on both ends.

ATGCATTCGG GCGCCGCCCC TCCCTCCCTC CCTCCCTCCA CTCTTTTCCG CTCCATGGTG 
CAACAAACAC ACACGCACAA CATACATACA GACAGACAGA CACATAGACG TGTGTGTGTG 
TGTGTGCTCA CTGAGCACAG CCGTACGCAC GAGACAGCCG TGGCTTTCTC ATCGGTTCTT 
TTTGTTTCCT GCTTTGCTTG CCCCCCCCCT TCCACTCTTA TCTCTCCCTC CCACCAAGCA 
CACCGCGTGT GCACGTGCCC GAACACGATG GGCAAAGAAA AGAGGACCGT CGCGGCACCC 
CACAAGGCCG ACAGCACGGC GAGCCCCACC GCGCCGGAAA TAGTGAAGTA CATGACGCCG 
TTTAGCTTTT CGGGCGAGAC GCTGGAGGCG GCGGGTCGCG TCTACCGCCT CCCGAGCAGG 
GCCGACTTCT ACACCTTTCG CGCTTTCGCC GACTCGCTGG ACGGCTTCAC CCTGAGCTAC 
AACCGCGCCA ATGAGGTGAT GGTGTGGGAA AAGAAGTTGC CCAACGAGCC AATGCACGTC 
ATCAAGGTGT TTGGCATCTT TGCCAAGACC AAGGACAACC CCAGCGGTGG CGCGACCCCG 
AGGGAGCTCT ACAACCTCTT GCAAGACCCT ATTTTCCGTG AGCAGTGGGA CGAGTACCGC 
CAGGAGGCGT TCCGCGTCTC GAGCCTGAGC GCTAACACGG ACATTGGCTA CTACGCGGCT 
AAGAGCCCGA TGCCACTCGT GGCGAATCGC GACTTTGTGA ACCAGCGCAT GTGGCATGAG 
GCGGGCCGAG ACGAGTACGT TATCTTCAAT ACATCGGTGC CGCACTCGAC GGTGCCACCA 
ACGTATCAGA AGGACGCACA CCGCAACAAG CACGGGCCGT ACGTCCGTGC CATCTCGAAG 
CTCACGGGGT ATCTGATCCG CCCCTGGAAG AACCCAAAGA GTGGCGAAGT CGAGGGCGCG 
AGTCTCACGT ACATTACGCA GACCGACCCG GGTGGCTGGA TCCCGGTAAG CCTGACAAAC 
TACATCGCCA CCAAGTTCGC CCCGAACACG ATGAAGAACG TAGCGCAGGC GCTGCCAAAG 
TTCCGCCTGT GGCTCAAGGA GCAGCTGGAG GCAGGCACGT ACACAAAGGA CTGGGATCTG 
ACCCCCGAGT GGTGGGTCGA GGATGGCAGC GACGACGCCG TCAAGAATGA GACGGTTGAG 
TTTGCCATTA AAAAGTGGAG TGAGGAGTCC GCCATGAAGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001463888.1
CDS	1..1242
Translation	MHSGAAPPSLPPSTLFRSMVQQTHTHNIHTDRQTHRRVCVCVLTEHSRTHETAVAFSSVLFVSCFACPPPSTLISPSHQAHRVCTCPNTMGKEKRTVAAPHKADSTASPTAPEIVKYMTPFSFSGETLEAAGRVYRLPSRADFYTFRAFADSLDGFTLSYNRANEVMVWEKKLPNEPMHVIKVFGIFAKTKDNPSGGATPRELYNLLQDPIFREQWDEYRQEAFRVSSLSANTDIGYYAAKSPMPLVANRDFVNQRMWHEAGRDEYVIFNTSVPHSTVPPTYQKDAHRNKHGPYVRAISKLTGYLIRPWKNPKSGEVEGASLTYITQTDPGGWIPVSLTNYIATKFAPNTMKNVAQALPKFRLWLKEQLEAGTYTKDWDLTPEWWVEDGSDDAVKNETVEFAIKKWSEESAMK

Target ORF information:

RefSeq Version	XM_001463851.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001463851.1

ORF Insert Sequence:

ATGCATTCGG GCGCCGCCCC TCCCTCCCTC CCTCCCTCCA CTCTTTTCCG CTCCATGGTG 
CAACAAACAC ACACGCACAA CATACATACA GACAGACAGA CACATAGACG TGTGTGTGTG 
TGTGTGCTCA CTGAGCACAG CCGTACGCAC GAGACAGCCG TGGCTTTCTC ATCGGTTCTT 
TTTGTTTCCT GCTTTGCTTG CCCCCCCCCT TCCACTCTTA TCTCTCCCTC CCACCAAGCA 
CACCGCGTGT GCACGTGCCC GAACACGATG GGCAAAGAAA AGAGGACCGT CGCGGCACCC 
CACAAGGCCG ACAGCACGGC GAGCCCCACC GCGCCGGAAA TAGTGAAGTA CATGACGCCG 
TTTAGCTTTT CGGGCGAGAC GCTGGAGGCG GCGGGTCGCG TCTACCGCCT CCCGAGCAGG 
GCCGACTTCT ACACCTTTCG CGCTTTCGCC GACTCGCTGG ACGGCTTCAC CCTGAGCTAC 
AACCGCGCCA ATGAGGTGAT GGTGTGGGAA AAGAAGTTGC CCAACGAGCC AATGCACGTC 
ATCAAGGTGT TTGGCATCTT TGCCAAGACC AAGGACAACC CCAGCGGTGG CGCGACCCCG 
AGGGAGCTCT ACAACCTCTT GCAAGACCCT ATTTTCCGTG AGCAGTGGGA CGAGTACCGC 
CAGGAGGCGT TCCGCGTCTC GAGCCTGAGC GCTAACACGG ACATTGGCTA CTACGCGGCT 
AAGAGCCCGA TGCCACTCGT GGCGAATCGC GACTTTGTGA ACCAGCGCAT GTGGCATGAG 
GCGGGCCGAG ACGAGTACGT TATCTTCAAT ACATCGGTGC CGCACTCGAC GGTGCCACCA 
ACGTATCAGA AGGACGCACA CCGCAACAAG CACGGGCCGT ACGTCCGTGC CATCTCGAAG 
CTCACGGGGT ATCTGATCCG CCCCTGGAAG AACCCAAAGA GTGGCGAAGT CGAGGGCGCG 
AGTCTCACGT ACATTACGCA GACCGACCCG GGTGGCTGGA TCCCGGTAAG CCTGACAAAC 
TACATCGCCA CCAAGTTCGC CCCGAACACG ATGAAGAACG TAGCGCAGGC GCTGCCAAAG 
TTCCGCCTGT GGCTCAAGGA GCAGCTGGAG GCAGGCACGT ACACAAAGGA CTGGGATCTG 
ACCCCCGAGT GGTGGGTCGA GGATGGCAGC GACGACGCCG TCAAGAATGA GACGGTTGAG 
TTTGCCATTA AAAAGTGGAG TGAGGAGTCC GCCATGAAGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_11_0880 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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