Gene Symbol | MHCX1 |
Entrez Gene ID | 100056391 |
Full Name | MHC class I heavy chain |
Gene Type | protein-coding |
Organism | Equus caballus(horse) |
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ORF » Species Summary » Equus caballus » MHCX1 cDNA ORF clone
Gene Symbol | MHCX1 |
Entrez Gene ID | 100056391 |
Full Name | MHC class I heavy chain |
Gene Type | protein-coding |
Organism | Equus caballus(horse) |
mRNA | Protein | Name |
---|---|---|
NM_001099766.1 | NP_001093236.1 | MHC class I antigen 3.5 precursor |
XM_023624055.1 | XP_023479823.1 | MHC class I antigen 3.5 isoform X1 |
Annotation of the Protein Coding Regions of the Equine Genome.
Hestand MS, Kalbfleisch TS, Coleman SJ, Zeng Z, Liu J, Orlando L, MacLeod JN
PloS one10(6)e0124375(2015)
Equine major histocompatibility complex class I molecules act as entry receptors that bind to equine herpesvirus-1 glycoprotein D.
Sasaki M, Hasebe R, Makino Y, Suzuki T, Fukushi H, Okamoto M, Matsuda K, Taniyama H, Sawa H, Kimura T
Genes to cells : devoted to molecular & cellular mechanisms16(4)343-57(2011 Apr)
Analysis of MHC class I genes across horse MHC haplotypes.
Tallmadge RL, Campbell JA, Miller DC, Antczak DF
Immunogenetics62(3)159-72(2010 Mar)
At least four MHC class I genes are transcribed in the horse: phylogenetic analysis suggests an unusual evolutionary history for the MHC in this species.
Ellis SA, Martin AJ, Holmes EC, Morrison WI
European journal of immunogenetics : official journal of the British Society for Histocompatibility and Immunogenetics22(3)249-60(1995 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following MHCX1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MHCX1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHb27973 | |
Clone ID Related Accession (Same CDS sequence) | NM_001099766.1 , XM_023624055.1 | |
Accession Version | NM_001099766.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1519747200000 | |
Organism | Equus caballus(horse) | |
Product | MHC class I antigen 3.5 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X71809.1. On Jul 26, 2007 this sequence version replaced XR_035861.1. ##Evidence-Data-START## Transcript exon combination :: X71809.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2452530, SAMEA2452532 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCCGCAA CTTTCCTCCT GCTGCTCTCG GGGACCCTGA CCCTGACCGA GACCTGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001093236.1 |
CDS | 11..1039 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCGCAA CTTTCCTCCT GCTGCTCTCG GGGACCCTGA CCCTGACCGA GACCTGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb27973 | |
Clone ID Related Accession (Same CDS sequence) | NM_001099766.1 , XM_023624055.1 | |
Accession Version | XM_023624055.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1516550400000 | |
Organism | Equus caballus(horse) | |
Product | MHC class I antigen 3.5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009163.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGCAA CTTTCCTCCT GCTGCTCTCG GGGACCCTGA CCCTGACCGA GACCTGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023479823.1 |
CDS | 85..1113 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCGCAA CTTTCCTCCT GCTGCTCTCG GGGACCCTGA CCCTGACCGA GACCTGGGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Annotation of the Protein Coding Regions of the Equine Genome. |
Equine major histocompatibility complex class I molecules act as entry receptors that bind to equine herpesvirus-1 glycoprotein D. |
Analysis of MHC class I genes across horse MHC haplotypes. |
At least four MHC class I genes are transcribed in the horse: phylogenetic analysis suggests an unusual evolutionary history for the MHC in this species. |