Dpse\GA18404 cDNA ORF clone, Drosophila pseudoobscura pseudoobscura

Gene
Clones
gRNAs

Summary

Gene Symbol	Dpse\GA18404
Entrez Gene ID	4817300
Full Name	GA18404 gene product from transcript GA18404-RA
Synonyms	GA18404,dpse_GLEANR_2585
Gene Type	protein-coding
Organism	Drosophila pseudoobscura pseudoobscura

mRNA and Protein(s)

mRNA	Protein	Name
XM_001356758.3	XP_001356794.2	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology.
English AC, Richards S, Han Y, Wang M, Vee V, Qu J, Qin X, Muzny DM, Reid JG, Worley KC, Gibbs RA
PloS one7(11)e47768(2012)

Evolution of genes and genomes on the Drosophila phylogeny.
, Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artieri CG, Barbash DA, Barker D, Barsanti P, Batterham P, Batzoglou S, Begun D, Bhutkar A, Blanco E, Bosak SA, Bradley RK, Brand AD, Brent MR, Brooks AN, Brown RH, Butlin RK, Caggese C, Calvi BR, Bernardo de Carvalho A, Caspi A, Castrezana S, Celniker SE, Chang JL, Chapple C, Chatterji S, Chinwalla A, Civetta A, Clifton SW, Comeron JM, Costello JC, Coyne JA, Daub J, David RG, Delcher AL, Delehaunty K, Do CB, Ebling H, Edwards K, Eickbush T, Evans JD, Filipski A, Findeiss S, Freyhult E, Fulton L, Fulton R, Garcia AC, Gardiner A, Garfield DA, Garvin BE, Gibson G, Gilbert D, Gnerre S, Godfrey J, Good R, Gotea V, Gravely B, Greenberg AJ, Griffiths-Jones S, Gross S, Guigo R, Gustafson EA, Haerty W, Hahn MW, Halligan DL, Halpern AL, Halter GM, Han MV, Heger A, Hillier L, Hinrichs AS, Holmes I, Hoskins RA, Hubisz MJ, Hultmark D, Huntley MA, Jaffe DB, Jagadeeshan S, Jeck WR, Johnson J, Jones CD, Jordan WC, Karpen GH, Kataoka E, Keightley PD, Kheradpour P, Kirkness EF, Koerich LB, Kristiansen K, Kudrna D, Kulathinal RJ, Kumar S, Kwok R, Lander E, Langley CH, Lapoint R, Lazzaro BP, Lee SJ, Levesque L, Li R, Lin CF, Lin MF, Lindblad-Toh K, Llopart A, Long M, Low L, Lozovsky E, Lu J, Luo M, Machado CA, Makalowski W, Marzo M, Matsuda M, Matzkin L, McAllister B, McBride CS, McKernan B, McKernan K, Mendez-Lago M, Minx P, Mollenhauer MU, Montooth K, Mount SM, Mu X, Myers E, Negre B, Newfeld S, Nielsen R, Noor MA, O'Grady P, Pachter L, Papaceit M, Parisi MJ, Parisi M, Parts L, Pedersen JS, Pesole G, Phillippy AM, Ponting CP, Pop M, Porcelli D, Powell JR, Prohaska S, Pruitt K, Puig M, Quesneville H, Ram KR, Rand D, Rasmussen MD, Reed LK, Reenan R, Reily A, Remington KA, Rieger TT, Ritchie MG, Robin C, Rogers YH, Rohde C, Rozas J, Rubenfield MJ, Ruiz A, Russo S, Salzberg SL, Sanchez-Gracia A, Saranga DJ, Sato H, Schaeffer SW, Schatz MC, Schlenke T, Schwartz R, Segarra C, Singh RS, Sirot L, Sirota M, Sisneros NB, Smith CD, Smith TF, Spieth J, Stage DE, Stark A, Stephan W, Strausberg RL, Strempel S, Sturgill D, Sutton G, Sutton GG, Tao W, Teichmann S, Tobari YN, Tomimura Y, Tsolas JM, Valente VL, Venter E, Venter JC, Vicario S, Vieira FG, Vilella AJ, Villasante A, Walenz B, Wang J, Wasserman M, Watts T, Wilson D, Wilson RK, Wing RA, Wolfner MF, Wong A, Wong GK, Wu CI, Wu G, Yamamoto D, Yang HP, Yang SP, Yorke JA, Yoshida K, Zdobnov E, Zhang P, Zhang Y, Zimin AV, Baldwin J, Abdouelleil A, Abdulkadir J, Abebe A, Abera B, Abreu J, Acer SC, Aftuck L, Alexander A, An P, Anderson E, Anderson S, Arachi H, Azer M, Bachantsang P, Barry A, Bayul T, Berlin A, Bessette D, Bloom T, Blye J, Boguslavskiy L, Bonnet C, Boukhgalter B, Bourzgui I, Brown A, Cahill P, Channer S, Cheshatsang Y, Chuda L, Citroen M, Collymore A, Cooke P, Costello M, D'Aco K, Daza R, De Haan G, DeGray S, DeMaso C, Dhargay N, Dooley K, Dooley E, Doricent M, Dorje P, Dorjee K, Dupes A, Elong R, Falk J, Farina A, Faro S, Ferguson D, Fisher S, Foley CD, Franke A, Friedrich D, Gadbois L, Gearin G, Gearin CR, Giannoukos G, Goode T, Graham J, Grandbois E, Grewal S, Gyaltsen K, Hafez N, Hagos B, Hall J, Henson C, Hollinger A, Honan T, Huard MD, Hughes L, Hurhula B, Husby ME, Kamat A, Kanga B, Kashin S, Khazanovich D, Kisner P, Lance K, Lara M, Lee W, Lennon N, Letendre F, LeVine R, Lipovsky A, Liu X, Liu J, Liu S, Lokyitsang T, Lokyitsang Y, Lubonja R, Lui A, MacDonald P, Magnisalis V, Maru K, Matthews C, McCusker W, McDonough S, Mehta T, Meldrim J, Meneus L, Mihai O, Mihalev A, Mihova T, Mittelman R, Mlenga V, Montmayeur A, Mulrain L, Navidi A, Naylor J, Negash T, Nguyen T, Nguyen N, Nicol R, Norbu C, Norbu N, Novod N, O'Neill B, Osman S, Markiewicz E, Oyono OL, Patti C, Phunkhang P, Pierre F, Priest M, Raghuraman S, Rege F, Reyes R, Rise C, Rogov P, Ross K, Ryan E, Settipalli S, Shea T, Sherpa N, Shi L, Shih D, Sparrow T, Spaulding J, Stalker J, Stange-Thomann N, Stavropoulos S, Stone C, Strader C, Tesfaye S, Thomson T, Thoulutsang Y, Thoulutsang D, Topham K, Topping I, Tsamla T, Vassiliev H, Vo A, Wangchuk T, Wangdi T, Weiand M, Wilkinson J, Wilson A, Yadav S, Young G, Yu Q, Zembek L, Zhong D, Zimmer A, Zwirko Z, Jaffe DB, Alvarez P, Brockman W, Butler J, Chin C, Gnerre S, Grabherr M, Kleber M, Mauceli E, MacCallum I
Nature450(7167)203-18(2007 Nov)

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.
Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R, Meisel RP, Couronne O, Hua S, Smith MA, Zhang P, Liu J, Bussemaker HJ, van Batenburg MF, Howells SL, Scherer SE, Sodergren E, Matthews BB, Crosby MA, Schroeder AJ, Ortiz-Barrientos D, Rives CM, Metzker ML, Muzny DM, Scott G, Steffen D, Wheeler DA, Worley KC, Havlak P, Durbin KJ, Egan A, Gill R, Hume J, Morgan MB, Miner G, Hamilton C, Huang Y, Waldron L, Verduzco D, Clerc-Blankenburg KP, Dubchak I, Noor MA, Anderson W, White KP, Clark AG, Schaeffer SW, Gelbart W, Weinstock GM, Gibbs RA
Genome research15(1)1-18(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Dpse\GA18404 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Dpse\GA18404 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe15761	XM_001356758.3 Latest version!	Drosophila pseudoobscura pseudoobscura uncharacterized protein (Dpse\GA18404), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$727.30 $1039.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Dpse\GA18404 ( XM_001356758.3 ) cDNA ORF clone, Drosophila pseudoobscura pseudoobscura -> XP_001356794.2 Drosophila pseudoobscura pseudoobscura uncharacterized protein (Dpse\GA18404), mRNA.

Price & Availability↑

CloneID	ODe15761
Clone ID Related Accession (Same CDS sequence)	XM_001356758.3
Accession Version	XM_001356758.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 4329bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1450627200000
Organism	Drosophila pseudoobscura pseudoobscura
Product	uncharacterized protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001589964). On Dec 22, 2015 this sequence version replaced XM_001356758.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 3.03 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAGAACG GCGTGGAAAA TGGTTCACTG GTCGATGGCG ACCAAGTAGA CGAGTGTGGC 
GAGAACCAGG TGGTAAGCAG CTCTGAAGGT GAGGGCGATG GGGAGGGGGA GGCTCAGCAG 
CCGCCGCCGC TGCCGCAAAC AACAAATAAT TGCGAGGGGG ATGGGGAATG CGATTTGTCG 
ACACCGACAA CCGCCGTAGC CATCCCGGAT CCAGAGCCAA CAGCAGTCGA TATTGCAGCA 
GCACCCGCGA CCATACTAGA CGACAGTCTC TGTGAAAAGG ATGTGGACAG TGATGCGCCG 
GACGACGACA ACGACGATGA GGCCAAGGAG AACTACGAGG GCTTCAATGG CACCGTCGGA 
CGCAACGTTA CTCTGCAAAC GCTGATGGCC GCCAATGTGC TGCAGCCCGG CAAGGGTCTG 
ATGACCATCG AGTACCTTGG CCAGAAGTTT GTCGGCGACC TGCTGTCCGA TGGCAAAATC 
AAATCGCAAG AGACTGAAAC GATATTTCTC ACACCCAGTG CCTGGGCCAT GCACTGCAAG 
CGCATCATTA ATCCAGAGAA GAAGAGCGGC TGCGGCTGGG CATCGGTCAA GTACAAGAAC 
AAGAAATTGG ACTCGTACAA AAACACCTAT CTGCGGAAGT GTGCCCTGCA AAAGGAATCC 
ACACCTGACG ACGGTGATCC AGATGCTGAG CGAAAGACTG ACTCTCCGGA GATAATCGTG 
AAGAGGACTG TTTTCGCACA CAACAGCATA TCGAATCGGA ATATTGTTCA CGATGCCAAC 
ATGCTCATTG AGTCCGTGCC GTTCACGTCT GTGGGTAAAC TGCAGCCCTT CCTGATCACC 
ATTAATTCGT CGGCTTTGCT GCTGGCCGAC TTCCACAGCC ATCTGACAGT GCGCGAGGTC 
TGCGGCTACT TGGGCGGCAC CTGGGACATG AACACACACA CTCTATCGAT TACAAAGACA 
TATCCTTGTC GCAACACGCG ATTCGATCGA CAGCGAGCCG GCGAAGTGGA GCGCGATATA 
CAAAAGATGA TGATCCAGGA TCAGTTGCTG CTGGTGGGAT GGTATCACTC CCATCCCAAG 
TTCCAAGCGG AGCCCACACT GCGTGACTGC GACTCTCAGC TGGACTACCA GATACGAATG 
CGCGGGGCGA GCGATCTTAC CTACACGCCC TGTGTTTCCC TCATTCTTTC ACCCTACTAT 
GATGAGAATC CCACATTGGA GTCGGTGGTC AAATGTATTT GGATTGTGCC GCCCAACGAG 
AACAAGCAGG CCATGGAATA CGGACGACCC ATGCTCATGC AGTACTCGGT GCTGCCGGAC 
AAGGAGATAC CGGAGGAGGT GCGCACAGAG ATACAGCTGT GCGTTGATTA CTACTCACAG 
TATCGCGGCG AAGTGGTCAA GTTCCGCAAC ATCTTCAACA ACGATGTGAC ATACAACGAA 
AAGCTGAAGA ACACCTTGTA CCCGAAATTC CCATCGAAGC AGAGCGACAA GGCGCTGTGG 
AACTGGATAT GCGCTGTGCT GGACTGCGAG CAAGAGGATG ATTTCATACC ACCGAAGACC 
ATTAAGATTA TCGACAACGA TGAGATGGAT GTGAAGATGG AGACACAGCC AGGAGCCGGA 
GCTGGGGCGA CTAGTGAGGC CACTAGCGAT GTGAAGCTGT CATCGGCCAA GGAAGAGCCT 
CTCGCCGATG GTGCGACATC TATTGAGGAG AGTGCGCGCA AAGCGGAAGA GGAATCATCT 
GCCCAGGCTG AACAGAAGGC GAGGGACCTC AAGGTGATGT CGCTGCAGGA GCAGCTCTGT 
ATGCCATCCG GCCTGAACAT GAATCCAGTG CGCATGCTGT CGCCACTAGC GACTCCCAAT 
CCCACGAGCA GCCTACCCGC AGTTCTGCCA AATCTTGCGG CTCCTGCAAT GCCACCGTCG 
GCGACCACGA GCCAGCTCCT TCCCCCACAG ACACCCAGTG GAAGTGTGGC AATCGCCCCC 
TCAGCCGTCA CAACGTCAGC CCTGACCTCT GCATTGACCG CCTCGCCGCG GGATAGCCCC 
ATCACCATAT CGAATTCGGC CAGTCCGGCT AAGTTCGAGG TGCCCGTGCG AGCCTCTCCG 
TCGCCGGCCA AATCGGACGC CTCGTCCCAC ACGTCCACGT CCCGCACTCG AAACTCGCCA 
GCGCCAAGTC CGGGCAAATT CAGTGTGAGC GACATTGCCC GCAACAGCCC CAGCATTACG 
CCCAACAAGT ACGAGGCAGC AGCAGGTGCC CTGGTGCCAC CAGCAGCGGC CTGTCTACCC 
ACAGCCAACG ATCTGATGGC CGCCAGTCTG GCCCAGCTCG CCGGACAGCT ACCGCCGAAC 
TTCCTGCAGG CAGATCTGGC AGCCCTCTTC CAGCAGCAGC GCAAGGATTA CGGCAACTCG 
TCGCTCAATC AATTGGCGGC AGCTGCGGCG AAAGTTGGAG GCTCCAAGCA GGGCAGCAAT 
GCTGCCAATG CAGCTTCCGC TTCCGCGGCG GCGGCAGCAG CGGCCCTGGG CGGTCTGAAT 
GATCCGAATG TCGCAGCAGC GGTGGCCGCC TACTCGAACA GCTTCAACAT GCCACTGCCC 
ACGGGCACGG GAGGCGGTGG AGGTGGTGGA GGTGCTGGTG GTAGCAGCAG CAACAACAAC 
AGCCACAGCA ACAGTAAATC CAAGTCTGAA AGGTCGTCAA AATCCTCATC GTCGTCGTCC 
TCCTCGAACT CGAGCTCCAC GTCCAATTCG TACAAAACGA AGCTGATGAA GGAGCTGGAC 
GAGCTGAAGA ACGATCCCCT GAAGATGAGC GAGCTTATCC GCTCCCCGGA GTATGCAGCG 
CTGCTCCTGC AGCAGGCAGA GGCGCTGGGA GCCACCACAC TGGGCACCCT TGGATTCGGC 
TCCGACTACA GCTATCTGAC AGGAGCGGGA CTGGGAGTGC CCACGGCCAG TGCGCTCACT 
GGCAGCCAGC CCTCGAACTC GTCGTCTGGC AAGTCCTCGA AGTCGTCCCC ATCGACGTCT 
GCCTCCGCTT CGGCTGCGGC AGCTGCGGCT GCCCTCAATG CGGACTACAA CAACTTGATA 
CAGGCCTCGA AGCTGCTCGG CTACGACTCC TACATGCAGC AAAGTAAGCA GAGTAATGAC 
CTCAACGCGT TCCTGCAGCA ACAGATGGCT GGTCTGGCCG CCGCTGCCAT TCCTCCGCCT 
CCAGTCGCCA GCAGCAGCAG CAGCTCCAAG AAGCAGCAAC AGCAACAACA CCAACAGCAG 
CAGCAACAAC TACAGCAGCA GCAGCAGCAG CAGCAACATC AGCTGCAGCA GCAGTCGGCC 
CAGGCGGACT ACACGGCTCT GCTACAGACC TACACCAAAC TGTTCGATCC CAACAATCAG 
TTTGCGGCGG CAATGGCCTC CAACAAGCAC ATGGCCGGGG CCCACAACGA ACTCTCGGCC 
CTGCTTAACG CTGGAGCAGG CATCGGTGGG GGTGGCGGCG GCGGCGGCGG CAGCAGCTCA 
AAGCAGAAAC AAAAGGACAT GGGAAACGAT ATGCTGAACC AGCTGCTGCA GCTAGAGAAG 
CAGGACTCGG AGATCAAGGC GCTGTTGTAC CGTCAGAACA AGGCTGCCGC CGACTTGGAT 
GCTCTGTTTG CCACGCCATC GGGGGCTGTG GTGGGGGCCG GTTCCTCGTC GAACTCGATG 
AAATCCTCCG GCTCGTCGGG CGGTGCTGGC GGAACAGGTG TACCCTCGCC CTCGTCCCTG 
TCGAGTCCGG CCGCCTACTA CAATGCATTG GCCCAGGAAA AAATGCAGGA CTATGCGGCC 
TTCTTCCAGC AGCAGCACGG AAAATACGGC ATACCAGATC CGCTCTCGAA GACGACCTTG 
GCCGCCAACA ATATGTTTAT GTCACCGTCG GCGCTGTTCA AGATCCAACA AGAGTCGCTG 
TCGGCCATGA TGATGAAGCC ACCGAAGTCG ACTACACCAT CGTCGGCGCG CACCCGAGAA 
TCCTCGGCTT CGCCGGCCCT GGAGCGACTC ACCCCAACCA AGTCGTCCAG CAGCGGCGGT 
GGTGGCAGCA ACTCGAACTC TGGTAGCAAA TACAACTTCA GTGCCGTGGA TCTGGCCATA 
TCGAGTGTGC CCTCAAACAC ACCGTCACCG GCCCCGTCCG ATGGCAGCAG TGGCTCCTCT 
CACCGACGGC CATCGCCAGA CCTGAGCCGA CTGTACGGGG AGCTGGCGCC CCCGGGCGGC 
CTTCTCGGCA GCGGGGTGCC CAAAAAACGC ATGGAGTTTG CCTCGGTGGC CGATCTGGCT 
GCACCGCCGC CAGCCAAGAT TCCCAAGAGC AGCATGAGCG ATGACATCCT GAACCTGTCG 
CACGATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001356794.2
CDS	106..4434
Translation	MENGVENGSLVDGDQVDECGENQVVSSSEGEGDGEGEAQQPPPLPQTTNNCEGDGECDLSTPTTAVAIPDPEPTAVDIAAAPATILDDSLCEKDVDSDAPDDDNDDEAKENYEGFNGTVGRNVTLQTLMAANVLQPGKGLMTIEYLGQKFVGDLLSDGKIKSQETETIFLTPSAWAMHCKRIINPEKKSGCGWASVKYKNKKLDSYKNTYLRKCALQKESTPDDGDPDAERKTDSPEIIVKRTVFAHNSISNRNIVHDANMLIESVPFTSVGKLQPFLITINSSALLLADFHSHLTVREVCGYLGGTWDMNTHTLSITKTYPCRNTRFDRQRAGEVERDIQKMMIQDQLLLVGWYHSHPKFQAEPTLRDCDSQLDYQIRMRGASDLTYTPCVSLILSPYYDENPTLESVVKCIWIVPPNENKQAMEYGRPMLMQYSVLPDKEIPEEVRTEIQLCVDYYSQYRGEVVKFRNIFNNDVTYNEKLKNTLYPKFPSKQSDKALWNWICAVLDCEQEDDFIPPKTIKIIDNDEMDVKMETQPGAGAGATSEATSDVKLSSAKEEPLADGATSIEESARKAEEESSAQAEQKARDLKVMSLQEQLCMPSGLNMNPVRMLSPLATPNPTSSLPAVLPNLAAPAMPPSATTSQLLPPQTPSGSVAIAPSAVTTSALTSALTASPRDSPITISNSASPAKFEVPVRASPSPAKSDASSHTSTSRTRNSPAPSPGKFSVSDIARNSPSITPNKYEAAAGALVPPAAACLPTANDLMAASLAQLAGQLPPNFLQADLAALFQQQRKDYGNSSLNQLAAAAAKVGGSKQGSNAANAASASAAAAAAALGGLNDPNVAAAVAAYSNSFNMPLPTGTGGGGGGGGAGGSSSNNNSHSNSKSKSERSSKSSSSSSSSNSSSTSNSYKTKLMKELDELKNDPLKMSELIRSPEYAALLLQQAEALGATTLGTLGFGSDYSYLTGAGLGVPTASALTGSQPSNSSSGKSSKSSPSTSASASAAAAAAALNADYNNLIQASKLLGYDSYMQQSKQSNDLNAFLQQQMAGLAAAAIPPPPVASSSSSSKKQQQQQHQQQQQQLQQQQQQQQHQLQQQSAQADYTALLQTYTKLFDPNNQFAAAMASNKHMAGAHNELSALLNAGAGIGGGGGGGGGSSSKQKQKDMGNDMLNQLLQLEKQDSEIKALLYRQNKAAADLDALFATPSGAVVGAGSSSNSMKSSGSSGGAGGTGVPSPSSLSSPAAYYNALAQEKMQDYAAFFQQQHGKYGIPDPLSKTTLAANNMFMSPSALFKIQQESLSAMMMKPPKSTTPSSARTRESSASPALERLTPTKSSSSGGGGSNSNSGSKYNFSAVDLAISSVPSNTPSPAPSDGSSGSSHRRPSPDLSRLYGELAPPGGLLGSGVPKKRMEFASVADLAAPPPAKIPKSSMSDDILNLSHD

Target ORF information:

RefSeq Version	XM_001356758.3
Organism	Drosophila pseudoobscura pseudoobscura
Definition	Drosophila pseudoobscura pseudoobscura uncharacterized protein (Dpse\GA18404), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001356758.3

ORF Insert Sequence:

ATGGAGAACG GCGTGGAAAA TGGTTCACTG GTCGATGGCG ACCAAGTAGA CGAGTGTGGC 
GAGAACCAGG TGGTAAGCAG CTCTGAAGGT GAGGGCGATG GGGAGGGGGA GGCTCAGCAG 
CCGCCGCCGC TGCCGCAAAC AACAAATAAT TGCGAGGGGG ATGGGGAATG CGATTTGTCG 
ACACCGACAA CCGCCGTAGC CATCCCGGAT CCAGAGCCAA CAGCAGTCGA TATTGCAGCA 
GCACCCGCGA CCATACTAGA CGACAGTCTC TGTGAAAAGG ATGTGGACAG TGATGCGCCG 
GACGACGACA ACGACGATGA GGCCAAGGAG AACTACGAGG GCTTCAATGG CACCGTCGGA 
CGCAACGTTA CTCTGCAAAC GCTGATGGCC GCCAATGTGC TGCAGCCCGG CAAGGGTCTG 
ATGACCATCG AGTACCTTGG CCAGAAGTTT GTCGGCGACC TGCTGTCCGA TGGCAAAATC 
AAATCGCAAG AGACTGAAAC GATATTTCTC ACACCCAGTG CCTGGGCCAT GCACTGCAAG 
CGCATCATTA ATCCAGAGAA GAAGAGCGGC TGCGGCTGGG CATCGGTCAA GTACAAGAAC 
AAGAAATTGG ACTCGTACAA AAACACCTAT CTGCGGAAGT GTGCCCTGCA AAAGGAATCC 
ACACCTGACG ACGGTGATCC AGATGCTGAG CGAAAGACTG ACTCTCCGGA GATAATCGTG 
AAGAGGACTG TTTTCGCACA CAACAGCATA TCGAATCGGA ATATTGTTCA CGATGCCAAC 
ATGCTCATTG AGTCCGTGCC GTTCACGTCT GTGGGTAAAC TGCAGCCCTT CCTGATCACC 
ATTAATTCGT CGGCTTTGCT GCTGGCCGAC TTCCACAGCC ATCTGACAGT GCGCGAGGTC 
TGCGGCTACT TGGGCGGCAC CTGGGACATG AACACACACA CTCTATCGAT TACAAAGACA 
TATCCTTGTC GCAACACGCG ATTCGATCGA CAGCGAGCCG GCGAAGTGGA GCGCGATATA 
CAAAAGATGA TGATCCAGGA TCAGTTGCTG CTGGTGGGAT GGTATCACTC CCATCCCAAG 
TTCCAAGCGG AGCCCACACT GCGTGACTGC GACTCTCAGC TGGACTACCA GATACGAATG 
CGCGGGGCGA GCGATCTTAC CTACACGCCC TGTGTTTCCC TCATTCTTTC ACCCTACTAT 
GATGAGAATC CCACATTGGA GTCGGTGGTC AAATGTATTT GGATTGTGCC GCCCAACGAG 
AACAAGCAGG CCATGGAATA CGGACGACCC ATGCTCATGC AGTACTCGGT GCTGCCGGAC 
AAGGAGATAC CGGAGGAGGT GCGCACAGAG ATACAGCTGT GCGTTGATTA CTACTCACAG 
TATCGCGGCG AAGTGGTCAA GTTCCGCAAC ATCTTCAACA ACGATGTGAC ATACAACGAA 
AAGCTGAAGA ACACCTTGTA CCCGAAATTC CCATCGAAGC AGAGCGACAA GGCGCTGTGG 
AACTGGATAT GCGCTGTGCT GGACTGCGAG CAAGAGGATG ATTTCATACC ACCGAAGACC 
ATTAAGATTA TCGACAACGA TGAGATGGAT GTGAAGATGG AGACACAGCC AGGAGCCGGA 
GCTGGGGCGA CTAGTGAGGC CACTAGCGAT GTGAAGCTGT CATCGGCCAA GGAAGAGCCT 
CTCGCCGATG GTGCGACATC TATTGAGGAG AGTGCGCGCA AAGCGGAAGA GGAATCATCT 
GCCCAGGCTG AACAGAAGGC GAGGGACCTC AAGGTGATGT CGCTGCAGGA GCAGCTCTGT 
ATGCCATCCG GCCTGAACAT GAATCCAGTG CGCATGCTGT CGCCACTAGC GACTCCCAAT 
CCCACGAGCA GCCTACCCGC AGTTCTGCCA AATCTTGCGG CTCCTGCAAT GCCACCGTCG 
GCGACCACGA GCCAGCTCCT TCCCCCACAG ACACCCAGTG GAAGTGTGGC AATCGCCCCC 
TCAGCCGTCA CAACGTCAGC CCTGACCTCT GCATTGACCG CCTCGCCGCG GGATAGCCCC 
ATCACCATAT CGAATTCGGC CAGTCCGGCT AAGTTCGAGG TGCCCGTGCG AGCCTCTCCG 
TCGCCGGCCA AATCGGACGC CTCGTCCCAC ACGTCCACGT CCCGCACTCG AAACTCGCCA 
GCGCCAAGTC CGGGCAAATT CAGTGTGAGC GACATTGCCC GCAACAGCCC CAGCATTACG 
CCCAACAAGT ACGAGGCAGC AGCAGGTGCC CTGGTGCCAC CAGCAGCGGC CTGTCTACCC 
ACAGCCAACG ATCTGATGGC CGCCAGTCTG GCCCAGCTCG CCGGACAGCT ACCGCCGAAC 
TTCCTGCAGG CAGATCTGGC AGCCCTCTTC CAGCAGCAGC GCAAGGATTA CGGCAACTCG 
TCGCTCAATC AATTGGCGGC AGCTGCGGCG AAAGTTGGAG GCTCCAAGCA GGGCAGCAAT 
GCTGCCAATG CAGCTTCCGC TTCCGCGGCG GCGGCAGCAG CGGCCCTGGG CGGTCTGAAT 
GATCCGAATG TCGCAGCAGC GGTGGCCGCC TACTCGAACA GCTTCAACAT GCCACTGCCC 
ACGGGCACGG GAGGCGGTGG AGGTGGTGGA GGTGCTGGTG GTAGCAGCAG CAACAACAAC 
AGCCACAGCA ACAGTAAATC CAAGTCTGAA AGGTCGTCAA AATCCTCATC GTCGTCGTCC 
TCCTCGAACT CGAGCTCCAC GTCCAATTCG TACAAAACGA AGCTGATGAA GGAGCTGGAC 
GAGCTGAAGA ACGATCCCCT GAAGATGAGC GAGCTTATCC GCTCCCCGGA GTATGCAGCG 
CTGCTCCTGC AGCAGGCAGA GGCGCTGGGA GCCACCACAC TGGGCACCCT TGGATTCGGC 
TCCGACTACA GCTATCTGAC AGGAGCGGGA CTGGGAGTGC CCACGGCCAG TGCGCTCACT 
GGCAGCCAGC CCTCGAACTC GTCGTCTGGC AAGTCCTCGA AGTCGTCCCC ATCGACGTCT 
GCCTCCGCTT CGGCTGCGGC AGCTGCGGCT GCCCTCAATG CGGACTACAA CAACTTGATA 
CAGGCCTCGA AGCTGCTCGG CTACGACTCC TACATGCAGC AAAGTAAGCA GAGTAATGAC 
CTCAACGCGT TCCTGCAGCA ACAGATGGCT GGTCTGGCCG CCGCTGCCAT TCCTCCGCCT 
CCAGTCGCCA GCAGCAGCAG CAGCTCCAAG AAGCAGCAAC AGCAACAACA CCAACAGCAG 
CAGCAACAAC TACAGCAGCA GCAGCAGCAG CAGCAACATC AGCTGCAGCA GCAGTCGGCC 
CAGGCGGACT ACACGGCTCT GCTACAGACC TACACCAAAC TGTTCGATCC CAACAATCAG 
TTTGCGGCGG CAATGGCCTC CAACAAGCAC ATGGCCGGGG CCCACAACGA ACTCTCGGCC 
CTGCTTAACG CTGGAGCAGG CATCGGTGGG GGTGGCGGCG GCGGCGGCGG CAGCAGCTCA 
AAGCAGAAAC AAAAGGACAT GGGAAACGAT ATGCTGAACC AGCTGCTGCA GCTAGAGAAG 
CAGGACTCGG AGATCAAGGC GCTGTTGTAC CGTCAGAACA AGGCTGCCGC CGACTTGGAT 
GCTCTGTTTG CCACGCCATC GGGGGCTGTG GTGGGGGCCG GTTCCTCGTC GAACTCGATG 
AAATCCTCCG GCTCGTCGGG CGGTGCTGGC GGAACAGGTG TACCCTCGCC CTCGTCCCTG 
TCGAGTCCGG CCGCCTACTA CAATGCATTG GCCCAGGAAA AAATGCAGGA CTATGCGGCC 
TTCTTCCAGC AGCAGCACGG AAAATACGGC ATACCAGATC CGCTCTCGAA GACGACCTTG 
GCCGCCAACA ATATGTTTAT GTCACCGTCG GCGCTGTTCA AGATCCAACA AGAGTCGCTG 
TCGGCCATGA TGATGAAGCC ACCGAAGTCG ACTACACCAT CGTCGGCGCG CACCCGAGAA 
TCCTCGGCTT CGCCGGCCCT GGAGCGACTC ACCCCAACCA AGTCGTCCAG CAGCGGCGGT 
GGTGGCAGCA ACTCGAACTC TGGTAGCAAA TACAACTTCA GTGCCGTGGA TCTGGCCATA 
TCGAGTGTGC CCTCAAACAC ACCGTCACCG GCCCCGTCCG ATGGCAGCAG TGGCTCCTCT 
CACCGACGGC CATCGCCAGA CCTGAGCCGA CTGTACGGGG AGCTGGCGCC CCCGGGCGGC 
CTTCTCGGCA GCGGGGTGCC CAAAAAACGC ATGGAGTTTG CCTCGGTGGC CGATCTGGCT 
GCACCGCCGC CAGCCAAGAT TCCCAAGAGC AGCATGAGCG ATGACATCCT GAACCTGTCG 
CACGATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology.
PloS one7(11)e47768(2012)
English AC,Richards S,Han Y,Wang M,Vee V,Qu J,Qin X,Muzny DM,Reid JG,Worley KC,Gibbs RA

Evolution of genes and genomes on the Drosophila phylogeny.
Nature450(7167)203-18(2007 Nov)
,Clark AG,Eisen MB,Smith DR,Bergman CM,Oliver B,Markow TA,Kaufman TC,Kellis M,Gelbart W,Iyer VN,Pollard DA,Sackton TB,Larracuente AM,Singh ND,Abad JP,Abt DN,Adryan B,Aguade M,Akashi H,Anderson WW,Aquadro CF,Ardell DH,Arguello R,Artieri CG,Barbash DA,Barker D,Barsanti P,Batterham P,Batzoglou S,Begun D,Bhutkar A,Blanco E,Bosak SA,Bradley RK,Brand AD,Brent MR,Brooks AN,Brown RH,Butlin RK,Caggese C,Calvi BR,Bernardo de Carvalho A,Caspi A,Castrezana S,Celniker SE,Chang JL,Chapple C,Chatterji S,Chinwalla A,Civetta A,Clifton SW,Comeron JM,Costello JC,Coyne JA,Daub J,David RG,Delcher AL,Delehaunty K,Do CB,Ebling H,Edwards K,Eickbush T,Evans JD,Filipski A,Findeiss S,Freyhult E,Fulton L,Fulton R,Garcia AC,Gardiner A,Garfield DA,Garvin BE,Gibson G,Gilbert D,Gnerre S,Godfrey J,Good R,Gotea V,Gravely B,Greenberg AJ,Griffiths-Jones S,Gross S,Guigo R,Gustafson EA,Haerty W,Hahn MW,Halligan DL,Halpern AL,Halter GM,Han MV,Heger A,Hillier L,Hinrichs AS,Holmes I,Hoskins RA,Hubisz MJ,Hultmark D,Huntley MA,Jaffe DB,Jagadeeshan S,Jeck WR,Johnson J,Jones CD,Jordan WC,Karpen GH,Kataoka E,Keightley PD,Kheradpour P,Kirkness EF,Koerich LB,Kristiansen K,Kudrna D,Kulathinal RJ,Kumar S,Kwok R,Lander E,Langley CH,Lapoint R,Lazzaro BP,Lee SJ,Levesque L,Li R,Lin CF,Lin MF,Lindblad-Toh K,Llopart A,Long M,Low L,Lozovsky E,Lu J,Luo M,Machado CA,Makalowski W,Marzo M,Matsuda M,Matzkin L,McAllister B,McBride CS,McKernan B,McKernan K,Mendez-Lago M,Minx P,Mollenhauer MU,Montooth K,Mount SM,Mu X,Myers E,Negre B,Newfeld S,Nielsen R,Noor MA,O'Grady P,Pachter L,Papaceit M,Parisi MJ,Parisi M,Parts L,Pedersen JS,Pesole G,Phillippy AM,Ponting CP,Pop M,Porcelli D,Powell JR,Prohaska S,Pruitt K,Puig M,Quesneville H,Ram KR,Rand D,Rasmussen MD,Reed LK,Reenan R,Reily A,Remington KA,Rieger TT,Ritchie MG,Robin C,Rogers YH,Rohde C,Rozas J,Rubenfield MJ,Ruiz A,Russo S,Salzberg SL,Sanchez-Gracia A,Saranga DJ,Sato H,Schaeffer SW,Schatz MC,Schlenke T,Schwartz R,Segarra C,Singh RS,Sirot L,Sirota M,Sisneros NB,Smith CD,Smith TF,Spieth J,Stage DE,Stark A,Stephan W,Strausberg RL,Strempel S,Sturgill D,Sutton G,Sutton GG,Tao W,Teichmann S,Tobari YN,Tomimura Y,Tsolas JM,Valente VL,Venter E,Venter JC,Vicario S,Vieira FG,Vilella AJ,Villasante A,Walenz B,Wang J,Wasserman M,Watts T,Wilson D,Wilson RK,Wing RA,Wolfner MF,Wong A,Wong GK,Wu CI,Wu G,Yamamoto D,Yang HP,Yang SP,Yorke JA,Yoshida K,Zdobnov E,Zhang P,Zhang Y,Zimin AV,Baldwin J,Abdouelleil A,Abdulkadir J,Abebe A,Abera B,Abreu J,Acer SC,Aftuck L,Alexander A,An P,Anderson E,Anderson S,Arachi H,Azer M,Bachantsang P,Barry A,Bayul T,Berlin A,Bessette D,Bloom T,Blye J,Boguslavskiy L,Bonnet C,Boukhgalter B,Bourzgui I,Brown A,Cahill P,Channer S,Cheshatsang Y,Chuda L,Citroen M,Collymore A,Cooke P,Costello M,D'Aco K,Daza R,De Haan G,DeGray S,DeMaso C,Dhargay N,Dooley K,Dooley E,Doricent M,Dorje P,Dorjee K,Dupes A,Elong R,Falk J,Farina A,Faro S,Ferguson D,Fisher S,Foley CD,Franke A,Friedrich D,Gadbois L,Gearin G,Gearin CR,Giannoukos G,Goode T,Graham J,Grandbois E,Grewal S,Gyaltsen K,Hafez N,Hagos B,Hall J,Henson C,Hollinger A,Honan T,Huard MD,Hughes L,Hurhula B,Husby ME,Kamat A,Kanga B,Kashin S,Khazanovich D,Kisner P,Lance K,Lara M,Lee W,Lennon N,Letendre F,LeVine R,Lipovsky A,Liu X,Liu J,Liu S,Lokyitsang T,Lokyitsang Y,Lubonja R,Lui A,MacDonald P,Magnisalis V,Maru K,Matthews C,McCusker W,McDonough S,Mehta T,Meldrim J,Meneus L,Mihai O,Mihalev A,Mihova T,Mittelman R,Mlenga V,Montmayeur A,Mulrain L,Navidi A,Naylor J,Negash T,Nguyen T,Nguyen N,Nicol R,Norbu C,Norbu N,Novod N,O'Neill B,Osman S,Markiewicz E,Oyono OL,Patti C,Phunkhang P,Pierre F,Priest M,Raghuraman S,Rege F,Reyes R,Rise C,Rogov P,Ross K,Ryan E,Settipalli S,Shea T,Sherpa N,Shi L,Shih D,Sparrow T,Spaulding J,Stalker J,Stange-Thomann N,Stavropoulos S,Stone C,Strader C,Tesfaye S,Thomson T,Thoulutsang Y,Thoulutsang D,Topham K,Topping I,Tsamla T,Vassiliev H,Vo A,Wangchuk T,Wangdi T,Weiand M,Wilkinson J,Wilson A,Yadav S,Young G,Yu Q,Zembek L,Zhong D,Zimmer A,Zwirko Z,Jaffe DB,Alvarez P,Brockman W,Butler J,Chin C,Gnerre S,Grabherr M,Kleber M,Mauceli E,MacCallum I

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.
Genome research15(1)1-18(2005 Jan)
Richards S,Liu Y,Bettencourt BR,Hradecky P,Letovsky S,Nielsen R,Thornton K,Hubisz MJ,Chen R,Meisel RP,Couronne O,Hua S,Smith MA,Zhang P,Liu J,Bussemaker HJ,van Batenburg MF,Howells SL,Scherer SE,Sodergren E,Matthews BB,Crosby MA,Schroeder AJ,Ortiz-Barrientos D,Rives CM,Metzker ML,Muzny DM,Scott G,Steffen D,Wheeler DA,Worley KC,Havlak P,Durbin KJ,Egan A,Gill R,Hume J,Morgan MB,Miner G,Hamilton C,Huang Y,Waldron L,Verduzco D,Clerc-Blankenburg KP,Dubchak I,Noor MA,Anderson W,White KP,Clark AG,Schaeffer SW,Gelbart W,Weinstock GM,Gibbs RA

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Dpse\GA18404 cDNA ORF clone, Drosophila pseudoobscura pseudoobscura

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