Dpse\GA13429 cDNA ORF clone, Drosophila pseudoobscura pseudoobscura

Gene
Clones
gRNAs

Summary

Gene Symbol	Dpse\GA13429
Entrez Gene ID	4812667
Full Name	GA13429 gene product from transcript GA13429-RB
Synonyms	GA13429,dpse_GLEANR_7681
Gene Type	protein-coding
Organism	Drosophila pseudoobscura pseudoobscura

mRNA and Protein(s)

mRNA	Protein	Name
XM_001353015.3	XP_001353051.3	uncharacterized protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology.
English AC, Richards S, Han Y, Wang M, Vee V, Qu J, Qin X, Muzny DM, Reid JG, Worley KC, Gibbs RA
PloS one7(11)e47768(2012)

Evolution of genes and genomes on the Drosophila phylogeny.
, Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artieri CG, Barbash DA, Barker D, Barsanti P, Batterham P, Batzoglou S, Begun D, Bhutkar A, Blanco E, Bosak SA, Bradley RK, Brand AD, Brent MR, Brooks AN, Brown RH, Butlin RK, Caggese C, Calvi BR, Bernardo de Carvalho A, Caspi A, Castrezana S, Celniker SE, Chang JL, Chapple C, Chatterji S, Chinwalla A, Civetta A, Clifton SW, Comeron JM, Costello JC, Coyne JA, Daub J, David RG, Delcher AL, Delehaunty K, Do CB, Ebling H, Edwards K, Eickbush T, Evans JD, Filipski A, Findeiss S, Freyhult E, Fulton L, Fulton R, Garcia AC, Gardiner A, Garfield DA, Garvin BE, Gibson G, Gilbert D, Gnerre S, Godfrey J, Good R, Gotea V, Gravely B, Greenberg AJ, Griffiths-Jones S, Gross S, Guigo R, Gustafson EA, Haerty W, Hahn MW, Halligan DL, Halpern AL, Halter GM, Han MV, Heger A, Hillier L, Hinrichs AS, Holmes I, Hoskins RA, Hubisz MJ, Hultmark D, Huntley MA, Jaffe DB, Jagadeeshan S, Jeck WR, Johnson J, Jones CD, Jordan WC, Karpen GH, Kataoka E, Keightley PD, Kheradpour P, Kirkness EF, Koerich LB, Kristiansen K, Kudrna D, Kulathinal RJ, Kumar S, Kwok R, Lander E, Langley CH, Lapoint R, Lazzaro BP, Lee SJ, Levesque L, Li R, Lin CF, Lin MF, Lindblad-Toh K, Llopart A, Long M, Low L, Lozovsky E, Lu J, Luo M, Machado CA, Makalowski W, Marzo M, Matsuda M, Matzkin L, McAllister B, McBride CS, McKernan B, McKernan K, Mendez-Lago M, Minx P, Mollenhauer MU, Montooth K, Mount SM, Mu X, Myers E, Negre B, Newfeld S, Nielsen R, Noor MA, O'Grady P, Pachter L, Papaceit M, Parisi MJ, Parisi M, Parts L, Pedersen JS, Pesole G, Phillippy AM, Ponting CP, Pop M, Porcelli D, Powell JR, Prohaska S, Pruitt K, Puig M, Quesneville H, Ram KR, Rand D, Rasmussen MD, Reed LK, Reenan R, Reily A, Remington KA, Rieger TT, Ritchie MG, Robin C, Rogers YH, Rohde C, Rozas J, Rubenfield MJ, Ruiz A, Russo S, Salzberg SL, Sanchez-Gracia A, Saranga DJ, Sato H, Schaeffer SW, Schatz MC, Schlenke T, Schwartz R, Segarra C, Singh RS, Sirot L, Sirota M, Sisneros NB, Smith CD, Smith TF, Spieth J, Stage DE, Stark A, Stephan W, Strausberg RL, Strempel S, Sturgill D, Sutton G, Sutton GG, Tao W, Teichmann S, Tobari YN, Tomimura Y, Tsolas JM, Valente VL, Venter E, Venter JC, Vicario S, Vieira FG, Vilella AJ, Villasante A, Walenz B, Wang J, Wasserman M, Watts T, Wilson D, Wilson RK, Wing RA, Wolfner MF, Wong A, Wong GK, Wu CI, Wu G, Yamamoto D, Yang HP, Yang SP, Yorke JA, Yoshida K, Zdobnov E, Zhang P, Zhang Y, Zimin AV, Baldwin J, Abdouelleil A, Abdulkadir J, Abebe A, Abera B, Abreu J, Acer SC, Aftuck L, Alexander A, An P, Anderson E, Anderson S, Arachi H, Azer M, Bachantsang P, Barry A, Bayul T, Berlin A, Bessette D, Bloom T, Blye J, Boguslavskiy L, Bonnet C, Boukhgalter B, Bourzgui I, Brown A, Cahill P, Channer S, Cheshatsang Y, Chuda L, Citroen M, Collymore A, Cooke P, Costello M, D'Aco K, Daza R, De Haan G, DeGray S, DeMaso C, Dhargay N, Dooley K, Dooley E, Doricent M, Dorje P, Dorjee K, Dupes A, Elong R, Falk J, Farina A, Faro S, Ferguson D, Fisher S, Foley CD, Franke A, Friedrich D, Gadbois L, Gearin G, Gearin CR, Giannoukos G, Goode T, Graham J, Grandbois E, Grewal S, Gyaltsen K, Hafez N, Hagos B, Hall J, Henson C, Hollinger A, Honan T, Huard MD, Hughes L, Hurhula B, Husby ME, Kamat A, Kanga B, Kashin S, Khazanovich D, Kisner P, Lance K, Lara M, Lee W, Lennon N, Letendre F, LeVine R, Lipovsky A, Liu X, Liu J, Liu S, Lokyitsang T, Lokyitsang Y, Lubonja R, Lui A, MacDonald P, Magnisalis V, Maru K, Matthews C, McCusker W, McDonough S, Mehta T, Meldrim J, Meneus L, Mihai O, Mihalev A, Mihova T, Mittelman R, Mlenga V, Montmayeur A, Mulrain L, Navidi A, Naylor J, Negash T, Nguyen T, Nguyen N, Nicol R, Norbu C, Norbu N, Novod N, O'Neill B, Osman S, Markiewicz E, Oyono OL, Patti C, Phunkhang P, Pierre F, Priest M, Raghuraman S, Rege F, Reyes R, Rise C, Rogov P, Ross K, Ryan E, Settipalli S, Shea T, Sherpa N, Shi L, Shih D, Sparrow T, Spaulding J, Stalker J, Stange-Thomann N, Stavropoulos S, Stone C, Strader C, Tesfaye S, Thomson T, Thoulutsang Y, Thoulutsang D, Topham K, Topping I, Tsamla T, Vassiliev H, Vo A, Wangchuk T, Wangdi T, Weiand M, Wilkinson J, Wilson A, Yadav S, Young G, Yu Q, Zembek L, Zhong D, Zimmer A, Zwirko Z, Jaffe DB, Alvarez P, Brockman W, Butler J, Chin C, Gnerre S, Grabherr M, Kleber M, Mauceli E, MacCallum I
Nature450(7167)203-18(2007 Nov)

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.
Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R, Meisel RP, Couronne O, Hua S, Smith MA, Zhang P, Liu J, Bussemaker HJ, van Batenburg MF, Howells SL, Scherer SE, Sodergren E, Matthews BB, Crosby MA, Schroeder AJ, Ortiz-Barrientos D, Rives CM, Metzker ML, Muzny DM, Scott G, Steffen D, Wheeler DA, Worley KC, Havlak P, Durbin KJ, Egan A, Gill R, Hume J, Morgan MB, Miner G, Hamilton C, Huang Y, Waldron L, Verduzco D, Clerc-Blankenburg KP, Dubchak I, Noor MA, Anderson W, White KP, Clark AG, Schaeffer SW, Gelbart W, Weinstock GM, Gibbs RA
Genome research15(1)1-18(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Dpse\GA13429 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Dpse\GA13429 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe26982	XM_001353015.3 Latest version!	Drosophila pseudoobscura pseudoobscura uncharacterized protein (Dpse\GA13429), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$727.30 $1039.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Dpse\GA13429 ( XM_001353015.3 ) cDNA ORF clone, Drosophila pseudoobscura pseudoobscura -> XP_001353051.3 Drosophila pseudoobscura pseudoobscura uncharacterized protein (Dpse\GA13429), mRNA.

Price & Availability↑

CloneID	ODe26982
Clone ID Related Accession (Same CDS sequence)	XM_001353015.3
Accession Version	XM_001353015.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 4269bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1450627200000
Organism	Drosophila pseudoobscura pseudoobscura
Product	uncharacterized protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001589954). On Dec 22, 2015 this sequence version replaced XM_001353015.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 3.03 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGAACAAG GATGTCCTCC AGTTGCTAGC AGGAATTCCT TGGCCAGTGC AGAGGAGGAG 
GGTACTCCGG CGTCGATCCC ATCGTCGGTC AGCGGCCAGC ACATTGAACT GAAGAGTCAG 
GCAGCGGCAG CGACGGCCAC GGCAACGGCA ACGACGACGA CGACTAAGGC GACGGCTACT 
ACCAGCCAGC AGGCAGGAGC AGCTGTATCA GCATTTTTAT CTATGTCAAC TCTGAGGGAG 
GATGTGGAGG ACGTGTGCGT GTCGTCGAAT TCTCAGCATG GCTTCGCCGT AGTGCTGGAC 
GATGAGTCAA GTACCTCCGG GGTGCTGGAG ACCTTTGAGA TTAGCTCTTC CAACTCACTG 
CCCACCAGCA CAAGGCCGGC ATCCACAGTT GGCGTGGTAG TGGCCGTGGA TGATAGCTCC 
TCCACGGACA CCATTAACGA CGATGACCAT CCCTCCTCCG AGCACAGTCG TGGGGGCTTC 
TTCAATGATA GTGAGATGCC GCCCATTGTC TGCCTTATAA ACGACGACGA TGATGATGAC 
GAGGATGAGG AGGAGGATGT GGAGGACGTG GAGGATGTGG AGGCAGATGT GGAGGATGAG 
GACGAGGACG ATGAAGAGGA GCTGATCGAG GACGATTATG AGGACGTAGA AGACATTGCG 
GCTGGCATCG ACTGCCCGAA CACATCACAA ATGGCCCTGC CCGATGGCAC CATCATGACG 
GCCGATGGCT CCAAGATCTT CCTCGAGACT CCCGTCGTAG AGGAGGCTCT GCCGCATCCC 
CATCCCGGCC ACAATGGCCA AGTGCTCGAT GGGACCGATG TCCCTTCAGA GTTCGGCGAT 
CAGGTGGTCG GCAAACCGAA GCGCTTGAGC GACGAATTTT TGCTTGGCGA GGATCAGCTG 
GAGGACCAGC ATCAGGCGGC AGCACATCCA CATCCAAGAG GAACCAAGTC TGAGCCAGGC 
AACTCCGACG ATAGCCGGCC GGAGGCAGAC GATGCCACCA CATACACATC ACTCCACGAT 
AGGCTGATGT CCGTGCGGCT GAAGCAGATG AGTCTCACAG CCAATGCCTC GTCGAATCCC 
TCGCCAGCCG CATCTGCCAC ATCTGCTGCA TCAGCGGCAT CAGGTGGGGC GCAGGAAGAG 
GCCTCCACAT CTACATCCAG TTGCAGCTCC AACGGCAACA CCCAGCCCCT GTCCAAGGCA 
GACATTCAGT CGATGGATCT GATAGAGCGG CGCGACTTTG AGACAGAGCA GCGTCTCACT 
GGCGGCATCA TTCTGCGCAC CAGCTCCCTG TTGAGTCGGA ACAAATTGAA TCTAAGTCTG 
ATCAAGTCCG TGGCTGGAGG CGGAACAGGA GCAGGAGCAG GTGTCGGCGG AAGTGGTGGA 
GTCACCAGCA GCAACAGCAG CAGCGATGAT TGGCCCAGCG GCAGCAACGG ACGCACTGTA 
TCCTCAGATA GCAAGTGCAC ATACAAGGAT CTATCGACGA CTCCAACGAG CAGCCGCAAG 
TATACCAACA GCCGGCTGAG CAAGTCCACT GCCAAACTGA ATCTGGGATC CACAATGGGC 
ACATCTATAT CAGCGGGGAC GGCGGGAACG ACGGGAACAG CGGCGGTAGC GTCCATCAGT 
AGCAGCTGCA GCCAGAATAG CAAATCCACC ATGGCGCTGT CGCAGTCAGA AGCGGCGGGC 
ACCAGCTGTA CGGGAGCTGC TCGAACAGAT GTGTTCACCA ATACCAATTC GAATGATGCC 
CCAACCATAG CCACATCTAC ATCTACATCC ACTTTGAACT GTCAGGAGCA GGAGGAGAAA 
CCTAGTGCAT CATCATCATC ATCATCATCA TCCCAGTCCA TCTCCTTCAG CTCTGTGGGC 
TCCCAGACCT CTCAGGATGG CGGCCGCACA TACGCTTTAC ACTCCACAAC ATCATCTACA 
CCGGCCTGTT CCGGGTCGGC CGATGCCGAC GATGCCCCAC AGGCCTCGAC GTCCACTTCA 
GCATCAGGAT CCTCCTCTTC GACATCGAGC GGCACAATGC GGTGCGAGTA CGTGGCCCCA 
TCAAAGGCGG CGCGCCAAGT GAACGCCAGT GCCCAGACAC AGGAACGCCT ATTCGCGCGC 
CTACCAGGCT GCGGTGGCGT TGCCGGTGTA TCAAAGGCAA CGGGCGGCGC TGCAGCTCAT 
GCATTGGTCA CTCGACAAAG ACGCAATGGC TCCAACGATG TCATTGTCCT GGAGGTTGTG 
GTCGAAGAGG GCGCCGCAGC CGGGGCAGGA GCCAACAACA GCAATAACAA TAACAACAAC 
GTGGTGGATG GGGGTCTGAT CGAGCCAGGA GATGGCGACG AGTCGTGGTT CAACTGCGAT 
GAGGAGAACA ACTCGGACTT GGAGGAGATT TGCACGTGCC AGAACGGTAA TAGTGGCTAT 
AGCAGCGGAA GCAACGGCAG CCTCAGTGAG CCCTATGACA TGGAGCCAGT AGAGTACGAC 
GAGCCCATCT CCTTGTCCAC ATCCTCATCG GCCATTTGCG ATGGCGGCAC CTCCGCATTG 
GCCAATACCG GGTCATTGAT TTCTCAGCAG CGGAAGCGTA AATACAACGA AACGCGTATT 
CTCGAGGGCT GCGATTACGC CATGACCATC TCGGCCAGCG GTGGGATGGT CGGAGATAAT 
TGCCGCAAGC GGATTGCCTA CGATTTTGCT TCCACACCGC GCTCGTCGTC CCAGCATATG 
GGGCCAACAG CGGTGCTGTC CATTACGCCA TCGCTGGTGG TGTCCAATGC GTGCGCCACA 
ACACCGATGG GGCGTCGTAC ACCGCGCGGG GTGTCTGCCC GTGACAATCC GCCGCCCGAG 
CTGCACCATT GGCTGCAGCA ATTCCAGCGC TGGTCCCATG TGGAGCGGCT ACTGGCCGTC 
GATCGGCTGA TCGACCATTG CGATCCCTCG CAGGTGCGTC ACATGATGAA GGTGATCGAG 
CCACAGTTCC AGCGGGACTT CATCTCGCTT CTGCCCCGGG AGATAGCCCT GCTGGTGCTC 
TCCTACCTGG AGCCTAAGGA TCTGCTGCGG GCTGCCCAGA CATGTCGCAG CTGGCGCTTC 
CTCTGCGACG ACAATCTTTT GTGGAAGGAG AAGTGCCGCA AGGGCCAGAT ACAGACGGAA 
TCGCGCAGCG ATCGACCGAA ACGGGGACGA GATGGCAACA TGCCGCCCAT TTCATCGCCG 
TGGAAGGCCG CCTATATGCG GCAGCACATC ATCGAGATGA ACTGGCGCTC GCGGCCCGTG 
CGCAAGCCCA AGGTGCTCAA GGGCCACGAC GATCATGTCA TCACATGCCT GCAGTTCTCT 
GGCAATCGCA TTGTGTCCGG CTCCGACGAC AACACCCTCA AGGTGTGGTC TGCAGTCAAT 
GGAAAGTGCC TACGCACACT GGTGGGCCAC ACTGGTGGTG TTTGGTCCTC GCAAATGTCG 
GGGAATATCA TCATCTCGGG CAGTACGGAT CGCACTCTGA AGGTCTGGGA TATGGACAGC 
GGGGCCTGTG TCCACACACT CCAGGGACAC ACGTCCACAG TGCGATGCAT GCATCTGCAT 
GGCAATAAGG TGGTCAGTGG GTCCCGAGAT GCCACTTTGC GGGTCTGGGA CATTGAATTG 
GGCTCCTGTC TGCATGTCCT GGTTGGCCAC CTGGCTGCCG TGCGTTGTGT ACAATACGAT 
GGAAAGCTTA TTGTGTCCGG AGCGTACGAT TACATGGTCA AGATCTGGCA TCCAGAGCGA 
CAGGAGTGTC TCCACACGCT GCAGGGACAT ACCAATCGTG TCTACTCACT GCAGTTCGAC 
GGTGTCCATG TGGTGTCGGG CTCGTTGGAC ACGTCCATTC GTGTGTGGGA TGCGGAGACG 
GGCAATTGCA AGCACACTCT GATGGGCCAT CAGAGCCTCA CGTCTGGCAT GGAGCTCCGA 
CAGAATATAC TCGTGTCTGG CAATGCCGAT TCCACCGTCA AAGTGTGGGA CATCACAACT 
GGACAATGTC TGCAAACGCT GTCGGGTCCC AACAAGCATC AGTCTGCGGT CACCTGTCTG 
CAGTTCAATT CGCGATTTGT GGTCACGAGT TCGGATGATG GCACTGTCAA GTTGTGGGAT 
GTGAAGACGG GTGATTTTAT ACGCAATCTT GTGGCCTTGG ATTCGGGTGG CTCCGGCGGT 
GTTGTGTGGC GCATTAGGGC AAATGATACG AAACTGATTT GTGCGGTTGG CTCGCGCAAT 
GGGACGGAGG AAACGAAGCT TATGGTCCTT GACTTTGATG TGGAGGGCGC TTGTGTCAAG 
TGTTCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001353051.3
CDS	258..4526
Translation	MEQGCPPVASRNSLASAEEEGTPASIPSSVSGQHIELKSQAAAATATATATTTTTKATATTSQQAGAAVSAFLSMSTLREDVEDVCVSSNSQHGFAVVLDDESSTSGVLETFEISSSNSLPTSTRPASTVGVVVAVDDSSSTDTINDDDHPSSEHSRGGFFNDSEMPPIVCLINDDDDDDEDEEEDVEDVEDVEADVEDEDEDDEEELIEDDYEDVEDIAAGIDCPNTSQMALPDGTIMTADGSKIFLETPVVEEALPHPHPGHNGQVLDGTDVPSEFGDQVVGKPKRLSDEFLLGEDQLEDQHQAAAHPHPRGTKSEPGNSDDSRPEADDATTYTSLHDRLMSVRLKQMSLTANASSNPSPAASATSAASAASGGAQEEASTSTSSCSSNGNTQPLSKADIQSMDLIERRDFETEQRLTGGIILRTSSLLSRNKLNLSLIKSVAGGGTGAGAGVGGSGGVTSSNSSSDDWPSGSNGRTVSSDSKCTYKDLSTTPTSSRKYTNSRLSKSTAKLNLGSTMGTSISAGTAGTTGTAAVASISSSCSQNSKSTMALSQSEAAGTSCTGAARTDVFTNTNSNDAPTIATSTSTSTLNCQEQEEKPSASSSSSSSSQSISFSSVGSQTSQDGGRTYALHSTTSSTPACSGSADADDAPQASTSTSASGSSSSTSSGTMRCEYVAPSKAARQVNASAQTQERLFARLPGCGGVAGVSKATGGAAAHALVTRQRRNGSNDVIVLEVVVEEGAAAGAGANNSNNNNNNVVDGGLIEPGDGDESWFNCDEENNSDLEEICTCQNGNSGYSSGSNGSLSEPYDMEPVEYDEPISLSTSSSAICDGGTSALANTGSLISQQRKRKYNETRILEGCDYAMTISASGGMVGDNCRKRIAYDFASTPRSSSQHMGPTAVLSITPSLVVSNACATTPMGRRTPRGVSARDNPPPELHHWLQQFQRWSHVERLLAVDRLIDHCDPSQVRHMMKVIEPQFQRDFISLLPREIALLVLSYLEPKDLLRAAQTCRSWRFLCDDNLLWKEKCRKGQIQTESRSDRPKRGRDGNMPPISSPWKAAYMRQHIIEMNWRSRPVRKPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGNKVVSGSRDATLRVWDIELGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGVHVVSGSLDTSIRVWDAETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHQSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGTEETKLMVLDFDVEGACVKCS

Target ORF information:

RefSeq Version	XM_001353015.3
Organism	Drosophila pseudoobscura pseudoobscura
Definition	Drosophila pseudoobscura pseudoobscura uncharacterized protein (Dpse\GA13429), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001353015.3

ORF Insert Sequence:

ATGGAACAAG GATGTCCTCC AGTTGCTAGC AGGAATTCCT TGGCCAGTGC AGAGGAGGAG 
GGTACTCCGG CGTCGATCCC ATCGTCGGTC AGCGGCCAGC ACATTGAACT GAAGAGTCAG 
GCAGCGGCAG CGACGGCCAC GGCAACGGCA ACGACGACGA CGACTAAGGC GACGGCTACT 
ACCAGCCAGC AGGCAGGAGC AGCTGTATCA GCATTTTTAT CTATGTCAAC TCTGAGGGAG 
GATGTGGAGG ACGTGTGCGT GTCGTCGAAT TCTCAGCATG GCTTCGCCGT AGTGCTGGAC 
GATGAGTCAA GTACCTCCGG GGTGCTGGAG ACCTTTGAGA TTAGCTCTTC CAACTCACTG 
CCCACCAGCA CAAGGCCGGC ATCCACAGTT GGCGTGGTAG TGGCCGTGGA TGATAGCTCC 
TCCACGGACA CCATTAACGA CGATGACCAT CCCTCCTCCG AGCACAGTCG TGGGGGCTTC 
TTCAATGATA GTGAGATGCC GCCCATTGTC TGCCTTATAA ACGACGACGA TGATGATGAC 
GAGGATGAGG AGGAGGATGT GGAGGACGTG GAGGATGTGG AGGCAGATGT GGAGGATGAG 
GACGAGGACG ATGAAGAGGA GCTGATCGAG GACGATTATG AGGACGTAGA AGACATTGCG 
GCTGGCATCG ACTGCCCGAA CACATCACAA ATGGCCCTGC CCGATGGCAC CATCATGACG 
GCCGATGGCT CCAAGATCTT CCTCGAGACT CCCGTCGTAG AGGAGGCTCT GCCGCATCCC 
CATCCCGGCC ACAATGGCCA AGTGCTCGAT GGGACCGATG TCCCTTCAGA GTTCGGCGAT 
CAGGTGGTCG GCAAACCGAA GCGCTTGAGC GACGAATTTT TGCTTGGCGA GGATCAGCTG 
GAGGACCAGC ATCAGGCGGC AGCACATCCA CATCCAAGAG GAACCAAGTC TGAGCCAGGC 
AACTCCGACG ATAGCCGGCC GGAGGCAGAC GATGCCACCA CATACACATC ACTCCACGAT 
AGGCTGATGT CCGTGCGGCT GAAGCAGATG AGTCTCACAG CCAATGCCTC GTCGAATCCC 
TCGCCAGCCG CATCTGCCAC ATCTGCTGCA TCAGCGGCAT CAGGTGGGGC GCAGGAAGAG 
GCCTCCACAT CTACATCCAG TTGCAGCTCC AACGGCAACA CCCAGCCCCT GTCCAAGGCA 
GACATTCAGT CGATGGATCT GATAGAGCGG CGCGACTTTG AGACAGAGCA GCGTCTCACT 
GGCGGCATCA TTCTGCGCAC CAGCTCCCTG TTGAGTCGGA ACAAATTGAA TCTAAGTCTG 
ATCAAGTCCG TGGCTGGAGG CGGAACAGGA GCAGGAGCAG GTGTCGGCGG AAGTGGTGGA 
GTCACCAGCA GCAACAGCAG CAGCGATGAT TGGCCCAGCG GCAGCAACGG ACGCACTGTA 
TCCTCAGATA GCAAGTGCAC ATACAAGGAT CTATCGACGA CTCCAACGAG CAGCCGCAAG 
TATACCAACA GCCGGCTGAG CAAGTCCACT GCCAAACTGA ATCTGGGATC CACAATGGGC 
ACATCTATAT CAGCGGGGAC GGCGGGAACG ACGGGAACAG CGGCGGTAGC GTCCATCAGT 
AGCAGCTGCA GCCAGAATAG CAAATCCACC ATGGCGCTGT CGCAGTCAGA AGCGGCGGGC 
ACCAGCTGTA CGGGAGCTGC TCGAACAGAT GTGTTCACCA ATACCAATTC GAATGATGCC 
CCAACCATAG CCACATCTAC ATCTACATCC ACTTTGAACT GTCAGGAGCA GGAGGAGAAA 
CCTAGTGCAT CATCATCATC ATCATCATCA TCCCAGTCCA TCTCCTTCAG CTCTGTGGGC 
TCCCAGACCT CTCAGGATGG CGGCCGCACA TACGCTTTAC ACTCCACAAC ATCATCTACA 
CCGGCCTGTT CCGGGTCGGC CGATGCCGAC GATGCCCCAC AGGCCTCGAC GTCCACTTCA 
GCATCAGGAT CCTCCTCTTC GACATCGAGC GGCACAATGC GGTGCGAGTA CGTGGCCCCA 
TCAAAGGCGG CGCGCCAAGT GAACGCCAGT GCCCAGACAC AGGAACGCCT ATTCGCGCGC 
CTACCAGGCT GCGGTGGCGT TGCCGGTGTA TCAAAGGCAA CGGGCGGCGC TGCAGCTCAT 
GCATTGGTCA CTCGACAAAG ACGCAATGGC TCCAACGATG TCATTGTCCT GGAGGTTGTG 
GTCGAAGAGG GCGCCGCAGC CGGGGCAGGA GCCAACAACA GCAATAACAA TAACAACAAC 
GTGGTGGATG GGGGTCTGAT CGAGCCAGGA GATGGCGACG AGTCGTGGTT CAACTGCGAT 
GAGGAGAACA ACTCGGACTT GGAGGAGATT TGCACGTGCC AGAACGGTAA TAGTGGCTAT 
AGCAGCGGAA GCAACGGCAG CCTCAGTGAG CCCTATGACA TGGAGCCAGT AGAGTACGAC 
GAGCCCATCT CCTTGTCCAC ATCCTCATCG GCCATTTGCG ATGGCGGCAC CTCCGCATTG 
GCCAATACCG GGTCATTGAT TTCTCAGCAG CGGAAGCGTA AATACAACGA AACGCGTATT 
CTCGAGGGCT GCGATTACGC CATGACCATC TCGGCCAGCG GTGGGATGGT CGGAGATAAT 
TGCCGCAAGC GGATTGCCTA CGATTTTGCT TCCACACCGC GCTCGTCGTC CCAGCATATG 
GGGCCAACAG CGGTGCTGTC CATTACGCCA TCGCTGGTGG TGTCCAATGC GTGCGCCACA 
ACACCGATGG GGCGTCGTAC ACCGCGCGGG GTGTCTGCCC GTGACAATCC GCCGCCCGAG 
CTGCACCATT GGCTGCAGCA ATTCCAGCGC TGGTCCCATG TGGAGCGGCT ACTGGCCGTC 
GATCGGCTGA TCGACCATTG CGATCCCTCG CAGGTGCGTC ACATGATGAA GGTGATCGAG 
CCACAGTTCC AGCGGGACTT CATCTCGCTT CTGCCCCGGG AGATAGCCCT GCTGGTGCTC 
TCCTACCTGG AGCCTAAGGA TCTGCTGCGG GCTGCCCAGA CATGTCGCAG CTGGCGCTTC 
CTCTGCGACG ACAATCTTTT GTGGAAGGAG AAGTGCCGCA AGGGCCAGAT ACAGACGGAA 
TCGCGCAGCG ATCGACCGAA ACGGGGACGA GATGGCAACA TGCCGCCCAT TTCATCGCCG 
TGGAAGGCCG CCTATATGCG GCAGCACATC ATCGAGATGA ACTGGCGCTC GCGGCCCGTG 
CGCAAGCCCA AGGTGCTCAA GGGCCACGAC GATCATGTCA TCACATGCCT GCAGTTCTCT 
GGCAATCGCA TTGTGTCCGG CTCCGACGAC AACACCCTCA AGGTGTGGTC TGCAGTCAAT 
GGAAAGTGCC TACGCACACT GGTGGGCCAC ACTGGTGGTG TTTGGTCCTC GCAAATGTCG 
GGGAATATCA TCATCTCGGG CAGTACGGAT CGCACTCTGA AGGTCTGGGA TATGGACAGC 
GGGGCCTGTG TCCACACACT CCAGGGACAC ACGTCCACAG TGCGATGCAT GCATCTGCAT 
GGCAATAAGG TGGTCAGTGG GTCCCGAGAT GCCACTTTGC GGGTCTGGGA CATTGAATTG 
GGCTCCTGTC TGCATGTCCT GGTTGGCCAC CTGGCTGCCG TGCGTTGTGT ACAATACGAT 
GGAAAGCTTA TTGTGTCCGG AGCGTACGAT TACATGGTCA AGATCTGGCA TCCAGAGCGA 
CAGGAGTGTC TCCACACGCT GCAGGGACAT ACCAATCGTG TCTACTCACT GCAGTTCGAC 
GGTGTCCATG TGGTGTCGGG CTCGTTGGAC ACGTCCATTC GTGTGTGGGA TGCGGAGACG 
GGCAATTGCA AGCACACTCT GATGGGCCAT CAGAGCCTCA CGTCTGGCAT GGAGCTCCGA 
CAGAATATAC TCGTGTCTGG CAATGCCGAT TCCACCGTCA AAGTGTGGGA CATCACAACT 
GGACAATGTC TGCAAACGCT GTCGGGTCCC AACAAGCATC AGTCTGCGGT CACCTGTCTG 
CAGTTCAATT CGCGATTTGT GGTCACGAGT TCGGATGATG GCACTGTCAA GTTGTGGGAT 
GTGAAGACGG GTGATTTTAT ACGCAATCTT GTGGCCTTGG ATTCGGGTGG CTCCGGCGGT 
GTTGTGTGGC GCATTAGGGC AAATGATACG AAACTGATTT GTGCGGTTGG CTCGCGCAAT 
GGGACGGAGG AAACGAAGCT TATGGTCCTT GACTTTGATG TGGAGGGCGC TTGTGTCAAG 
TGTTCATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology.
PloS one7(11)e47768(2012)
English AC,Richards S,Han Y,Wang M,Vee V,Qu J,Qin X,Muzny DM,Reid JG,Worley KC,Gibbs RA

Evolution of genes and genomes on the Drosophila phylogeny.
Nature450(7167)203-18(2007 Nov)
,Clark AG,Eisen MB,Smith DR,Bergman CM,Oliver B,Markow TA,Kaufman TC,Kellis M,Gelbart W,Iyer VN,Pollard DA,Sackton TB,Larracuente AM,Singh ND,Abad JP,Abt DN,Adryan B,Aguade M,Akashi H,Anderson WW,Aquadro CF,Ardell DH,Arguello R,Artieri CG,Barbash DA,Barker D,Barsanti P,Batterham P,Batzoglou S,Begun D,Bhutkar A,Blanco E,Bosak SA,Bradley RK,Brand AD,Brent MR,Brooks AN,Brown RH,Butlin RK,Caggese C,Calvi BR,Bernardo de Carvalho A,Caspi A,Castrezana S,Celniker SE,Chang JL,Chapple C,Chatterji S,Chinwalla A,Civetta A,Clifton SW,Comeron JM,Costello JC,Coyne JA,Daub J,David RG,Delcher AL,Delehaunty K,Do CB,Ebling H,Edwards K,Eickbush T,Evans JD,Filipski A,Findeiss S,Freyhult E,Fulton L,Fulton R,Garcia AC,Gardiner A,Garfield DA,Garvin BE,Gibson G,Gilbert D,Gnerre S,Godfrey J,Good R,Gotea V,Gravely B,Greenberg AJ,Griffiths-Jones S,Gross S,Guigo R,Gustafson EA,Haerty W,Hahn MW,Halligan DL,Halpern AL,Halter GM,Han MV,Heger A,Hillier L,Hinrichs AS,Holmes I,Hoskins RA,Hubisz MJ,Hultmark D,Huntley MA,Jaffe DB,Jagadeeshan S,Jeck WR,Johnson J,Jones CD,Jordan WC,Karpen GH,Kataoka E,Keightley PD,Kheradpour P,Kirkness EF,Koerich LB,Kristiansen K,Kudrna D,Kulathinal RJ,Kumar S,Kwok R,Lander E,Langley CH,Lapoint R,Lazzaro BP,Lee SJ,Levesque L,Li R,Lin CF,Lin MF,Lindblad-Toh K,Llopart A,Long M,Low L,Lozovsky E,Lu J,Luo M,Machado CA,Makalowski W,Marzo M,Matsuda M,Matzkin L,McAllister B,McBride CS,McKernan B,McKernan K,Mendez-Lago M,Minx P,Mollenhauer MU,Montooth K,Mount SM,Mu X,Myers E,Negre B,Newfeld S,Nielsen R,Noor MA,O'Grady P,Pachter L,Papaceit M,Parisi MJ,Parisi M,Parts L,Pedersen JS,Pesole G,Phillippy AM,Ponting CP,Pop M,Porcelli D,Powell JR,Prohaska S,Pruitt K,Puig M,Quesneville H,Ram KR,Rand D,Rasmussen MD,Reed LK,Reenan R,Reily A,Remington KA,Rieger TT,Ritchie MG,Robin C,Rogers YH,Rohde C,Rozas J,Rubenfield MJ,Ruiz A,Russo S,Salzberg SL,Sanchez-Gracia A,Saranga DJ,Sato H,Schaeffer SW,Schatz MC,Schlenke T,Schwartz R,Segarra C,Singh RS,Sirot L,Sirota M,Sisneros NB,Smith CD,Smith TF,Spieth J,Stage DE,Stark A,Stephan W,Strausberg RL,Strempel S,Sturgill D,Sutton G,Sutton GG,Tao W,Teichmann S,Tobari YN,Tomimura Y,Tsolas JM,Valente VL,Venter E,Venter JC,Vicario S,Vieira FG,Vilella AJ,Villasante A,Walenz B,Wang J,Wasserman M,Watts T,Wilson D,Wilson RK,Wing RA,Wolfner MF,Wong A,Wong GK,Wu CI,Wu G,Yamamoto D,Yang HP,Yang SP,Yorke JA,Yoshida K,Zdobnov E,Zhang P,Zhang Y,Zimin AV,Baldwin J,Abdouelleil A,Abdulkadir J,Abebe A,Abera B,Abreu J,Acer SC,Aftuck L,Alexander A,An P,Anderson E,Anderson S,Arachi H,Azer M,Bachantsang P,Barry A,Bayul T,Berlin A,Bessette D,Bloom T,Blye J,Boguslavskiy L,Bonnet C,Boukhgalter B,Bourzgui I,Brown A,Cahill P,Channer S,Cheshatsang Y,Chuda L,Citroen M,Collymore A,Cooke P,Costello M,D'Aco K,Daza R,De Haan G,DeGray S,DeMaso C,Dhargay N,Dooley K,Dooley E,Doricent M,Dorje P,Dorjee K,Dupes A,Elong R,Falk J,Farina A,Faro S,Ferguson D,Fisher S,Foley CD,Franke A,Friedrich D,Gadbois L,Gearin G,Gearin CR,Giannoukos G,Goode T,Graham J,Grandbois E,Grewal S,Gyaltsen K,Hafez N,Hagos B,Hall J,Henson C,Hollinger A,Honan T,Huard MD,Hughes L,Hurhula B,Husby ME,Kamat A,Kanga B,Kashin S,Khazanovich D,Kisner P,Lance K,Lara M,Lee W,Lennon N,Letendre F,LeVine R,Lipovsky A,Liu X,Liu J,Liu S,Lokyitsang T,Lokyitsang Y,Lubonja R,Lui A,MacDonald P,Magnisalis V,Maru K,Matthews C,McCusker W,McDonough S,Mehta T,Meldrim J,Meneus L,Mihai O,Mihalev A,Mihova T,Mittelman R,Mlenga V,Montmayeur A,Mulrain L,Navidi A,Naylor J,Negash T,Nguyen T,Nguyen N,Nicol R,Norbu C,Norbu N,Novod N,O'Neill B,Osman S,Markiewicz E,Oyono OL,Patti C,Phunkhang P,Pierre F,Priest M,Raghuraman S,Rege F,Reyes R,Rise C,Rogov P,Ross K,Ryan E,Settipalli S,Shea T,Sherpa N,Shi L,Shih D,Sparrow T,Spaulding J,Stalker J,Stange-Thomann N,Stavropoulos S,Stone C,Strader C,Tesfaye S,Thomson T,Thoulutsang Y,Thoulutsang D,Topham K,Topping I,Tsamla T,Vassiliev H,Vo A,Wangchuk T,Wangdi T,Weiand M,Wilkinson J,Wilson A,Yadav S,Young G,Yu Q,Zembek L,Zhong D,Zimmer A,Zwirko Z,Jaffe DB,Alvarez P,Brockman W,Butler J,Chin C,Gnerre S,Grabherr M,Kleber M,Mauceli E,MacCallum I

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.
Genome research15(1)1-18(2005 Jan)
Richards S,Liu Y,Bettencourt BR,Hradecky P,Letovsky S,Nielsen R,Thornton K,Hubisz MJ,Chen R,Meisel RP,Couronne O,Hua S,Smith MA,Zhang P,Liu J,Bussemaker HJ,van Batenburg MF,Howells SL,Scherer SE,Sodergren E,Matthews BB,Crosby MA,Schroeder AJ,Ortiz-Barrientos D,Rives CM,Metzker ML,Muzny DM,Scott G,Steffen D,Wheeler DA,Worley KC,Havlak P,Durbin KJ,Egan A,Gill R,Hume J,Morgan MB,Miner G,Hamilton C,Huang Y,Waldron L,Verduzco D,Clerc-Blankenburg KP,Dubchak I,Noor MA,Anderson W,White KP,Clark AG,Schaeffer SW,Gelbart W,Weinstock GM,Gibbs RA

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Dpse\GA13429 cDNA ORF clone, Drosophila pseudoobscura pseudoobscura

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