Gene Symbol | Su(var)3-9 |
Entrez Gene ID | 685996 |
Full Name | suppressor of variegation 3-9 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
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ORF » Species Summary » Apis mellifera » Su(var)3-9 cDNA ORF clone
Gene Symbol | Su(var)3-9 |
Entrez Gene ID | 685996 |
Full Name | suppressor of variegation 3-9 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
mRNA | Protein | Name |
---|---|---|
XM_006561307.2 | XP_006561370.1 | suppressor of variegation 3-9 isoform X1 |
XM_006561308.2 | XP_006561371.1 | suppressor of variegation 3-9 isoform X2 |
NM_001040277.1 | NP_001035367.1 | suppressor of variegation 3-9 isoform 1 |
XM_006561309.3 | XP_006561372.1 | suppressor of variegation 3-9 isoform X3 |
NM_001171169.1 | NP_001164640.1 | suppressor of variegation 3-9 isoform 2 |
XM_006561307.3 | XP_006561370.1 | suppressor of variegation 3-9 isoform X1 |
XM_006561308.3 | XP_006561371.1 | suppressor of variegation 3-9 isoform X2 |
XM_006561309.2 | XP_006561372.1 | suppressor of variegation 3-9 isoform X3 |
The evolution of the histone methyltransferase gene Su(var)3-9 in metazoans includes a fusion with and a re-fission from a functionally unrelated gene.
Krauss V, Fassl A, Fiebig P, Patties I, Sass H
BMC evolutionary biology618(2006 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Su(var)3-9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Su(var)3-9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHd00402 | |
Clone ID Related Accession (Same CDS sequence) | NM_001171169.1 | |
Accession Version | NM_001171169.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1422bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1535644800000 | |
Organism | Apis mellifera(honey bee) | |
Product | suppressor of variegation 3-9 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AADG06003668.1 and AADG06003669.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: HP468488.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00008880, SAMN00113341 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001164640.1 |
CDS | 27..1448 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd16412 | |
Clone ID Related Accession (Same CDS sequence) | XM_006561309.3 , XM_006561309.2 | |
Accession Version | XM_006561309.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1422bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | suppressor of variegation 3-9 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037653.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 19, 2018 this sequence version replaced XM_006561309.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006561372.1 |
CDS | 104..1525 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd16412 | |
Clone ID Related Accession (Same CDS sequence) | XM_006561309.3 , XM_006561309.2 | |
Accession Version | XM_006561309.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1422bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | suppressor of variegation 3-9 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007085.3) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 24, 2016 this sequence version replaced XM_006561309.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006561372.1 |
CDS | 91..1512 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00388 | |
Clone ID Related Accession (Same CDS sequence) | NM_001040277.1 | |
Accession Version | NM_001040277.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2052bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556812800000 | |
Organism | Apis mellifera(honey bee) | |
Product | suppressor of variegation 3-9 isoform 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AM050259.1. ##Evidence-Data-START## Transcript exon combination :: AM050259.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00008880, SAMN00113341 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001035367.1 |
CDS | 27..2078 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd16410 | |
Clone ID Related Accession (Same CDS sequence) | XM_006561307.2 | |
Accession Version | XM_006561307.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2889bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | suppressor of variegation 3-9 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007085.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 24, 2016 this sequence version replaced XM_006561307.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006561370.1 |
CDS | 75..2963 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd16411 | |
Clone ID Related Accession (Same CDS sequence) | XM_006561308.2 | |
Accession Version | XM_006561308.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2685bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | suppressor of variegation 3-9 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007085.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 24, 2016 this sequence version replaced XM_006561308.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGAAGAA TGAAGAGGAT TCAAGGGATT TTTGATGTAC AAGACACTCG TGCAGAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006561371.1 |
CDS | 7..2691 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGAAGAA TGAAGAGGAT TCAAGGGATT TTTGATGTAC AAGACACTCG TGCAGAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28049 | |
Clone ID Related Accession (Same CDS sequence) | XM_006561307.3 | |
Accession Version | XM_006561307.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2889bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | suppressor of variegation 3-9 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037653.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 19, 2018 this sequence version replaced XM_006561307.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006561370.1 |
CDS | 78..2966 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGTGGTG AGGAAGGTTT AGGAGTGACT ACGGGTCAAC CAAATCTTTA TAAACAAGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28050 | |
Clone ID Related Accession (Same CDS sequence) | XM_006561308.3 | |
Accession Version | XM_006561308.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2685bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | suppressor of variegation 3-9 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037653.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 19, 2018 this sequence version replaced XM_006561308.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGAAGAA TGAAGAGGAT TCAAGGGATT TTTGATGTAC AAGACACTCG TGCAGAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006561371.1 |
CDS | 7..2691 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAGAAGAA TGAAGAGGAT TCAAGGGATT TTTGATGTAC AAGACACTCG TGCAGAGGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The evolution of the histone methyltransferase gene Su(var)3-9 in metazoans includes a fusion with and a re-fission from a functionally unrelated gene. |