Gene Symbol | Blop |
Entrez Gene ID | 406128 |
Full Name | blue-sensitive opsin |
Synonyms | GB13493 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
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ORF » Species Summary » Apis mellifera » Blop cDNA ORF clone
Gene Symbol | Blop |
Entrez Gene ID | 406128 |
Full Name | blue-sensitive opsin |
Synonyms | GB13493 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
mRNA | Protein | Name |
---|---|---|
XM_006565584.2 | XP_006565647.1 | opsin, blue-sensitive isoform X1 |
XM_016915977.1 | XP_016771466.1 | opsin, blue-sensitive isoform X1 |
NM_001011606.1 | NP_001011606.1 | opsin, blue-sensitive |
Finding the missing honey bee genes: lessons learned from a genome upgrade.
Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, , Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA,
BMC genomics1586(2014 Jan)
Insights into social insects from the genome of the honeybee Apis mellifera.
Nature443(7114)931-49(2006 Oct)
Pteropsin: a vertebrate-like non-visual opsin expressed in the honey bee brain.
Velarde RA, Sauer CD, Walden KK, Fahrbach SE, Robertson HM
Insect biochemistry and molecular biology35(12)1367-77(2005 Dec)
Honeybee blue- and ultraviolet-sensitive opsins: cloning, heterologous expression in Drosophila, and physiological characterization.
Townson SM, Chang BS, Salcedo E, Chadwell LV, Pierce NE, Britt SG
The Journal of neuroscience : the official journal of the Society for Neuroscience18(7)2412-22(1998 Apr)
Characterisation of the ultraviolet-sensitive opsin gene in the honey bee, Apis mellifera.
Bellingham J, Wilkie SE, Morris AG, Bowmaker JK, Hunt DM
European journal of biochemistry243(3)775-81(1997 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Blop gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Blop cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHd00114 | |
Clone ID Related Accession (Same CDS sequence) | NM_001011606.1 | |
Accession Version | NM_001011606.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1134bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577116800000 | |
Organism | Apis mellifera(honey bee) | |
Product | opsin, blue-sensitive | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF004168.1. On Feb 5, 2005 this sequence version replaced XM_392042.1. ##Evidence-Data-START## Transcript exon combination :: AF004168.1, U70841.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00113341, SAMN00120364 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTTATTGC ATAATAAGAC TCTCGCCGGT AAAGCGTTGG CTTTCATCGC CGAGGAAGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001011606.1 |
CDS | 378..1511 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTATTGC ATAATAAGAC TCTCGCCGGT AAAGCGTTGG CTTTCATCGC CGAGGAAGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd14953 | |
Clone ID Related Accession (Same CDS sequence) | XM_006565584.2 , XM_016915977.1 | |
Accession Version | XM_006565584.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | opsin, blue-sensitive isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007083.3) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 24, 2016 this sequence version replaced XM_006565584.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGAAA AATTTTTGGG ATGGAACGTA CCGCCGGAGT ATTCGGATCT TGTGCATCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006565647.1 |
CDS | 640..1701 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGAGAAA AATTTTTGGG ATGGAACGTA CCGCCGGAGT ATTCGGATCT TGTGCATCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd14953 | |
Clone ID Related Accession (Same CDS sequence) | XM_006565584.2 , XM_016915977.1 | |
Accession Version | XM_016915977.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1062bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | opsin, blue-sensitive isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007083.3) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGAGAAA AATTTTTGGG ATGGAACGTA CCGCCGGAGT ATTCGGATCT TGTGCATCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016771466.1 |
CDS | 522..1583 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGAGAAA AATTTTTGGG ATGGAACGTA CCGCCGGAGT ATTCGGATCT TGTGCATCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Finding the missing honey bee genes: lessons learned from a genome upgrade. |
Insights into social insects from the genome of the honeybee Apis mellifera. |
Pteropsin: a vertebrate-like non-visual opsin expressed in the honey bee brain. |
Honeybee blue- and ultraviolet-sensitive opsins: cloning, heterologous expression in Drosophila, and physiological characterization. |
Characterisation of the ultraviolet-sensitive opsin gene in the honey bee, Apis mellifera. |