Gene Symbol | LOC100578262 |
Entrez Gene ID | 100578262 |
Full Name | uncharacterized LOC100578262 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
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ORF » Species Summary » Apis mellifera » LOC100578262 cDNA ORF clone
Gene Symbol | LOC100578262 |
Entrez Gene ID | 100578262 |
Full Name | uncharacterized LOC100578262 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
mRNA | Protein | Name |
---|---|---|
XM_026445252.1 | XP_026301037.1 | uncharacterized protein LOC100578262 isoform X1 |
XM_026445256.1 | XP_026301041.1 | uncharacterized protein LOC100578262 isoform X2 |
XM_026445255.1 | XP_026301040.1 | uncharacterized protein LOC100578262 isoform X1 |
XM_026445254.1 | XP_026301039.1 | uncharacterized protein LOC100578262 isoform X1 |
XM_026445253.1 | XP_026301038.1 | uncharacterized protein LOC100578262 isoform X1 |
NM_001242518.1 | NP_001229447.1 | uncharacterized protein LOC100578262 |
Finding the missing honey bee genes: lessons learned from a genome upgrade.
Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, , Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA,
BMC genomics1586(2014 Jan)
Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee.
Whitfield CW, Band MR, Bonaldo MF, Kumar CG, Liu L, Pardinas JR, Robertson HM, Soares MB, Robinson GE
Genome research12(4)555-66(2002 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100578262 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100578262 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHd00252 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242518.1 | |
Accession Version | NM_001242518.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3690bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556899200000 | |
Organism | Apis mellifera(honey bee) | |
Product | uncharacterized protein LOC100578262 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HP518324.1, HP565856.1 and BI510472.1. On Jun 14, 2011 this sequence version replaced XR_119904.1. ##Evidence-Data-START## Transcript exon combination :: HP518324.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02719775, SAMN04413667 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229447.1 |
CDS | 1148..4837 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd27469 | |
Clone ID Related Accession (Same CDS sequence) | XM_026445252.1 , XM_026445255.1 , XM_026445254.1 , XM_026445253.1 | |
Accession Version | XM_026445252.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3690bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | uncharacterized protein LOC100578262 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037652.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026301037.1 |
CDS | 695..4384 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd27469 | |
Clone ID Related Accession (Same CDS sequence) | XM_026445252.1 , XM_026445255.1 , XM_026445254.1 , XM_026445253.1 | |
Accession Version | XM_026445255.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3690bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | uncharacterized protein LOC100578262 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037652.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026301040.1 |
CDS | 491..4180 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd27469 | |
Clone ID Related Accession (Same CDS sequence) | XM_026445252.1 , XM_026445255.1 , XM_026445254.1 , XM_026445253.1 | |
Accession Version | XM_026445254.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3690bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | uncharacterized protein LOC100578262 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037652.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026301039.1 |
CDS | 538..4227 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd27469 | |
Clone ID Related Accession (Same CDS sequence) | XM_026445252.1 , XM_026445255.1 , XM_026445254.1 , XM_026445253.1 | |
Accession Version | XM_026445253.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3690bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | uncharacterized protein LOC100578262 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037652.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026301038.1 |
CDS | 648..4337 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCATTAG AGAGTGTTTC CGCGGCTGAG ACTCTAATCC AAAGTAACAA TGATAATGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd27470 | |
Clone ID Related Accession (Same CDS sequence) | XM_026445256.1 | |
Accession Version | XM_026445256.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3687bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | uncharacterized protein LOC100578262 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037652.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATAATGA TAATGATGCT AATAATGAAC ACAATTTGTG GTAACAATGA TAATGACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026301041.1 |
CDS | 410..4096 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATAATGA TAATGATGCT AATAATGAAC ACAATTTGTG GTAACAATGA TAATGACTTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Finding the missing honey bee genes: lessons learned from a genome upgrade. |
Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee. |