ORF » Species Summary » Sorghum bicolor » LOC8085498 cDNA ORF clone

LOC8085498 cDNA ORF clone, Sorghum bicolor(sorghum)

The following LOC8085498 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC8085498 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OSc24464 XM_002465828.1
Latest version!		 Sorghum bicolor hypothetical protein, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OSc111345 XM_002465828.2
Latest version!		 Sorghum bicolor cysteine--tRNA ligase 2, cytoplasmic (LOC8085498), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC8085498 ( XM_002465828.1 ) cDNA ORF clone, Sorghum bicolor(sorghum) -> XP_002465873.1 Sorghum bicolor hypothetical protein, mRNA.
    Price & Availability↑
    CloneID OSc24464
    Clone ID Related Accession (Same CDS sequence) XM_002465828.1
    Accession Version XM_002465828.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1401bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1247328000000
    Organism Sorghum bicolor(Sorghum)
    Product hypothetical protein
    Comment PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012870). COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCTGCGC TCCAGTGCTT GCCTCCTACA CGTGAGCCAC GTGTAACAGA ACACATTGAG 
    CATATTATAG AATTGATAAC CAAGATAATA CAGAATGGGC ATGGCTATGC TATAGAAGGG 
    GATGTTTACT TTTCTGTTGA TAGTTTCCCT GAATATCTCC TTCTATCTGG AAGAAAGTTG 
    GATCAAAATC GTGCTGGTGA ACGTGTCGCT GTCGATACAA GAAAGCGTAA TCCTGCAGAT 
    TTTGCCCTGT GGAAGTCTGC CAAGGAGGGT GAGCCCTCCT GGGAAAGTCC TTGGGGGCAT 
    GGAAGACCAG GATGGCATAT TGAATGCAGT GCAATGAGTG CTCACTATTT AGGACATGTG 
    TTTGATATTC ATGGTGGAGG GAGAGATTTG ATTTTTCCTC ACCATGAAAA TGAACTTGCA 
    CAAAGCCGAG CGGCTTATCC AGAGAGTGAG GTCATATGCT GGATGCATAA TGGCTTTGTG 
    AACAAGGATG ACCAGAAAAT GTCAAAATCA GAGAATAACT TCTTCACTAT CAGAGATATT 
    ATTTCTCTAT ACCACCCGAT GGCTTTACGC TATTTCCTGA TACGGACACA TTATAGATCT 
    GATGTGAATC ATTCTGATAA AGCAATTGAG AAAGCATCAG ATCGTGTGTA CTATATTTAT 
    AAGACATTGT ATGACTGTGA GGAAATGTTA TCTAAATATC ATGAAGAGGG CATCTCTGTT 
    CCAGTCCCAG CTGAGGAGCA AAATCTGGTC AACAGACACC GTAAAGCTTT CTTGGACAAT 
    ATGTCGGATG ATCTTAAAAC CACAGATGTT CTGGATGGTG AGGATGGCCT CACGGATCTG 
    CTGAAGGCCA TTAACAGCAA TATGAATGAT TTGAAGAAGC TGCAACAAAA ACTAGAGCAA 
    CAGCAGAAGA AGCAGCAGCA GAAAAAGCAA CAACAGAAGC AACAGCAAAC ACAGAAACAA 
    CCTGAAGATT ACATTCAAGG TCTTATCGCT CTGGAGACAG AAATTAAAGA TAAACTATCA 
    GTACTTGGTC TGATGCCACC TTCATCTTTG TCAGAGGTAC TGAATCAATT GAAGGACAAA 
    GCATTAAAGC GAGCAAATTT GACTGAAGAG CAATTGCAAG AGCAGATTGA GCAGAGAACT 
    GTTGCGAGGA AGAACAAGCA GTTTGAGGTG TCTGACGAAA TCAGGAAACA TCTTGCTACT 
    CTAGGCATTT CCCTTATGGA TGAACCCACT GGTACATCAT GGAGACCGTG CGAACCAGAT 
    CGGCCTGAAG AGTCAGGATC TGTAACTAGT GATAGTGTAC CTGGAAAATT TAATAAAAGC 
    TCAGACCCGG CTGAAGAGTC AGGATCTATT ACTACTAACG CGGTAACTGA AACATTAGCC 
    GATGCTCAGG TGCCACCTTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002465873.1
    CDS406..1806
    Translation

    Target ORF information:

    RefSeq Version XM_002465828.1
    Organism Sorghum bicolor(Sorghum)
    Definition Sorghum bicolor hypothetical protein, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002465828.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCTGCGC TCCAGTGCTT GCCTCCTACA CGTGAGCCAC GTGTAACAGA ACACATTGAG 
    CATATTATAG AATTGATAAC CAAGATAATA CAGAATGGGC ATGGCTATGC TATAGAAGGG 
    GATGTTTACT TTTCTGTTGA TAGTTTCCCT GAATATCTCC TTCTATCTGG AAGAAAGTTG 
    GATCAAAATC GTGCTGGTGA ACGTGTCGCT GTCGATACAA GAAAGCGTAA TCCTGCAGAT 
    TTTGCCCTGT GGAAGTCTGC CAAGGAGGGT GAGCCCTCCT GGGAAAGTCC TTGGGGGCAT 
    GGAAGACCAG GATGGCATAT TGAATGCAGT GCAATGAGTG CTCACTATTT AGGACATGTG 
    TTTGATATTC ATGGTGGAGG GAGAGATTTG ATTTTTCCTC ACCATGAAAA TGAACTTGCA 
    CAAAGCCGAG CGGCTTATCC AGAGAGTGAG GTCATATGCT GGATGCATAA TGGCTTTGTG 
    AACAAGGATG ACCAGAAAAT GTCAAAATCA GAGAATAACT TCTTCACTAT CAGAGATATT 
    ATTTCTCTAT ACCACCCGAT GGCTTTACGC TATTTCCTGA TACGGACACA TTATAGATCT 
    GATGTGAATC ATTCTGATAA AGCAATTGAG AAAGCATCAG ATCGTGTGTA CTATATTTAT 
    AAGACATTGT ATGACTGTGA GGAAATGTTA TCTAAATATC ATGAAGAGGG CATCTCTGTT 
    CCAGTCCCAG CTGAGGAGCA AAATCTGGTC AACAGACACC GTAAAGCTTT CTTGGACAAT 
    ATGTCGGATG ATCTTAAAAC CACAGATGTT CTGGATGGTG AGGATGGCCT CACGGATCTG 
    CTGAAGGCCA TTAACAGCAA TATGAATGAT TTGAAGAAGC TGCAACAAAA ACTAGAGCAA 
    CAGCAGAAGA AGCAGCAGCA GAAAAAGCAA CAACAGAAGC AACAGCAAAC ACAGAAACAA 
    CCTGAAGATT ACATTCAAGG TCTTATCGCT CTGGAGACAG AAATTAAAGA TAAACTATCA 
    GTACTTGGTC TGATGCCACC TTCATCTTTG TCAGAGGTAC TGAATCAATT GAAGGACAAA 
    GCATTAAAGC GAGCAAATTT GACTGAAGAG CAATTGCAAG AGCAGATTGA GCAGAGAACT 
    GTTGCGAGGA AGAACAAGCA GTTTGAGGTG TCTGACGAAA TCAGGAAACA TCTTGCTACT 
    CTAGGCATTT CCCTTATGGA TGAACCCACT GGTACATCAT GGAGACCGTG CGAACCAGAT 
    CGGCCTGAAG AGTCAGGATC TGTAACTAGT GATAGTGTAC CTGGAAAATT TAATAAAAGC 
    TCAGACCCGG CTGAAGAGTC AGGATCTATT ACTACTAACG CGGTAACTGA AACATTAGCC 
    GATGCTCAGG TGCCACCTTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC8085498 ( XM_002465828.2 ) cDNA ORF clone, Sorghum bicolor(sorghum) -> XP_002465873.2 Sorghum bicolor cysteine--tRNA ligase 2, cytoplasmic (LOC8085498), mRNA.
    Price & Availability↑
    CloneID OSc111345
    Clone ID Related Accession (Same CDS sequence) XM_002465828.2
    Accession Version XM_002465828.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1737bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497196800000
    Organism Sorghum bicolor(sorghum)
    Product LOW QUALITY PROTEIN: cysteine--tRNA ligase 2, cytoplasmic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012870.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 13, 2017 this sequence version replaced XM_002465828.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCGGAGC CACCGTCGAC ACCGCCTCCA TCGCAGCCGC AATTGAAGCT ATTCAACTCG 
    ATGACTAAGG CGAAGGAGCC CTTCCAGCCG CGCGTGGAGG GCAAGGTCGG CATGTACGTC 
    TGCGGCGTTA CGCCCTACGA CTTCAGCCAC GTCGGCCACG CCCGCGCCTA CGTCGCCTTC 
    GACGTGCTGT ACAGATATCT TAAATTCTTG GGTTATGAAG TTGAATATGT GCGTAATTTT 
    ACGGACNATG ATGATAAGAT TATTAGGCGT GCCAATGAAG CTGGTGAAAC ACATGCAAGT 
    TTGAGTAGCC GGTTTATCAA TGAATTCCTT CTTGATATGG CTGCGCTCCA GTGCTTGCCT 
    CCTACACGTG AGCCACGTGT AACAGAACAC ATTGAGCATA TTATAGAATT GATAACCAAG 
    ATAATACAGA ATGGGCATGG CTATGCTATA GAAGGGGATG TTTACTTTTC TGTTGATAGT 
    TTCCCTGAAT ATCTCCTTCT ATCTGGAAGA AAGTTGGATC AAAATCGTGC TGGTGAACGT 
    GTCGCTGTCG ATACAAGAAA GCGTAATCCT GCAGATTTTG CCCTGTGGAA GTCTGCCAAG 
    GAGGGTGAGC CCTCCTGGGA AAGTCCTTGG GGGCATGGAA GACCAGGATG GCATATTGAA 
    TGCAGTGCAA TGAGTGCTCA CTATTTAGGA CATGTGTTTG ATATTCATGG TGGAGGGAGA 
    GATTTGATTT TTCCTCACCA TGAAAATGAA CTTGCACAAA GCCGAGCGGC TTATCCAGAG 
    AGTGAGGTCA TATGCTGGAT GCATAATGGC TTTGTGAACA AGGATGACCA GAAAATGTCA 
    AAATCAGAGA ATAACTTCTT CACTATCAGA GATATTATTT CTCTATACCA CCCGATGGCT 
    TTACGCTATT TCCTGATACG GACACATTAT AGATCTGATG TGAATCATTC TGATAAAGCA 
    ATTGAGAAAG CATCAGATCG TGTGTACTAT ATTTATAAGA CATTGTATGA CTGTGAGGAA 
    ATGTTATCTA AATATCATGA AGAGGGCATC TCTGTTCCAG TCCCAGCTGA GGAGCAAAAT 
    CTGGTCAACA GACACCGTAA AGCTTTCTTG GACAATATGT CGGATGATCT TAAAACCACA 
    GATGTTCTGG ATGGTGAGGA TGGCCTCACG GATCTGCTGA AGGCCATTAA CAGCAATATG 
    AATGATTTGA AGAAGCTGCA ACAAAAACTA GAGCAACAGC AGAAGAAGCA GCAGCAGAAA 
    AAGCAACAAC AGAAGCAACA GCAAACACAG AAACAACCTG AAGATTACAT TCAAGGTCTT 
    ATCGCTCTGG AGACAGAAAT TAAAGATAAA CTATCAGTAC TTGGTCTGAT GCCACCTTCA 
    TCTTTGTCAG AGGTACTGAA TCAATTGAAG GACAAAGCAT TAAAGCGAGC AAATTTGACT 
    GAAGAGCAAT TGCAAGAGCA GATTGAGCAG AGAACTGTTG CGAGGAAGAA CAAGCAGTTT 
    GAGGTGTCTG ACGAAATCAG GAAACATCTT GCTACTCTAG GCATTTCCCT TATGGATGAA 
    CCCACTGGTA CATCATGGAG ACCGTGCGAA CCAGATCGGC CTGAAGAGTC AGGATCTGTA 
    ACTAGTGATA GTGTACCTGG AAAATTTAAT AAAAGCTCAG ACCCGGCTGA AGAGTCAGGA 
    TCTATTACTA CTAACGCGGT AACTGAAACA TTAGCCGATG CTCAGGTGCC ACCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002465873.2
    CDS143..1879
    Translation

    Target ORF information:

    RefSeq Version XM_002465828.2
    Organism Sorghum bicolor(sorghum)
    Definition Sorghum bicolor cysteine--tRNA ligase 2, cytoplasmic (LOC8085498), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002465828.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCGGAGC CACCGTCGAC ACCGCCTCCA TCGCAGCCGC AATTGAAGCT ATTCAACTCG 
    ATGACTAAGG CGAAGGAGCC CTTCCAGCCG CGCGTGGAGG GCAAGGTCGG CATGTACGTC 
    TGCGGCGTTA CGCCCTACGA CTTCAGCCAC GTCGGCCACG CCCGCGCCTA CGTCGCCTTC 
    GACGTGCTGT ACAGATATCT TAAATTCTTG GGTTATGAAG TTGAATATGT GCGTAATTTT 
    ACGGACNATG ATGATAAGAT TATTAGGCGT GCCAATGAAG CTGGTGAAAC ACATGCAAGT 
    TTGAGTAGCC GGTTTATCAA TGAATTCCTT CTTGATATGG CTGCGCTCCA GTGCTTGCCT 
    CCTACACGTG AGCCACGTGT AACAGAACAC ATTGAGCATA TTATAGAATT GATAACCAAG 
    ATAATACAGA ATGGGCATGG CTATGCTATA GAAGGGGATG TTTACTTTTC TGTTGATAGT 
    TTCCCTGAAT ATCTCCTTCT ATCTGGAAGA AAGTTGGATC AAAATCGTGC TGGTGAACGT 
    GTCGCTGTCG ATACAAGAAA GCGTAATCCT GCAGATTTTG CCCTGTGGAA GTCTGCCAAG 
    GAGGGTGAGC CCTCCTGGGA AAGTCCTTGG GGGCATGGAA GACCAGGATG GCATATTGAA 
    TGCAGTGCAA TGAGTGCTCA CTATTTAGGA CATGTGTTTG ATATTCATGG TGGAGGGAGA 
    GATTTGATTT TTCCTCACCA TGAAAATGAA CTTGCACAAA GCCGAGCGGC TTATCCAGAG 
    AGTGAGGTCA TATGCTGGAT GCATAATGGC TTTGTGAACA AGGATGACCA GAAAATGTCA 
    AAATCAGAGA ATAACTTCTT CACTATCAGA GATATTATTT CTCTATACCA CCCGATGGCT 
    TTACGCTATT TCCTGATACG GACACATTAT AGATCTGATG TGAATCATTC TGATAAAGCA 
    ATTGAGAAAG CATCAGATCG TGTGTACTAT ATTTATAAGA CATTGTATGA CTGTGAGGAA 
    ATGTTATCTA AATATCATGA AGAGGGCATC TCTGTTCCAG TCCCAGCTGA GGAGCAAAAT 
    CTGGTCAACA GACACCGTAA AGCTTTCTTG GACAATATGT CGGATGATCT TAAAACCACA 
    GATGTTCTGG ATGGTGAGGA TGGCCTCACG GATCTGCTGA AGGCCATTAA CAGCAATATG 
    AATGATTTGA AGAAGCTGCA ACAAAAACTA GAGCAACAGC AGAAGAAGCA GCAGCAGAAA 
    AAGCAACAAC AGAAGCAACA GCAAACACAG AAACAACCTG AAGATTACAT TCAAGGTCTT 
    ATCGCTCTGG AGACAGAAAT TAAAGATAAA CTATCAGTAC TTGGTCTGAT GCCACCTTCA 
    TCTTTGTCAG AGGTACTGAA TCAATTGAAG GACAAAGCAT TAAAGCGAGC AAATTTGACT 
    GAAGAGCAAT TGCAAGAGCA GATTGAGCAG AGAACTGTTG CGAGGAAGAA CAAGCAGTTT 
    GAGGTGTCTG ACGAAATCAG GAAACATCTT GCTACTCTAG GCATTTCCCT TATGGATGAA 
    CCCACTGGTA CATCATGGAG ACCGTGCGAA CCAGATCGGC CTGAAGAGTC AGGATCTGTA 
    ACTAGTGATA GTGTACCTGG AAAATTTAAT AAAAGCTCAG ACCCGGCTGA AGAGTCAGGA 
    TCTATTACTA CTAACGCGGT AACTGAAACA TTAGCCGATG CTCAGGTGCC ACCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Sorghum bicolor genome and the diversification of grasses.
    Nature457(7229)551-6(2009 Jan)
    Paterson AH,Bowers JE,Bruggmann R,Dubchak I,Grimwood J,Gundlach H,Haberer G,Hellsten U,Mitros T,Poliakov A,Schmutz J,Spannagl M,Tang H,Wang X,Wicker T,Bharti AK,Chapman J,Feltus FA,Gowik U,Grigoriev IV,Lyons E,Maher CA,Martis M,Narechania A,Otillar RP,Penning BW,Salamov AA,Wang Y,Zhang L,Carpita NC,Freeling M,Gingle AR,Hash CT,Keller B,Klein P,Kresovich S,McCann MC,Ming R,Peterson DG,Mehboob-ur-Rahman,Ware D,Westhoff P,Mayer KF,Messing J,Rokhsar DS


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