ORF » Species Summary » Sorghum bicolor » LOC8079686 cDNA ORF clone

LOC8079686 cDNA ORF clone, Sorghum bicolor(sorghum)

The following LOC8079686 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC8079686 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OSc110396 XM_002463544.2
Latest version!		 Sorghum bicolor probable polygalacturonase (LOC8079686), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OSc24668 XM_002463544.1
Latest version!		 Sorghum bicolor hypothetical protein, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC8079686 ( XM_002463544.2 ) cDNA ORF clone, Sorghum bicolor(sorghum) -> XP_002463589.2 Sorghum bicolor probable polygalacturonase (LOC8079686), mRNA.
    Price & Availability↑
    CloneID OSc110396
    Clone ID Related Accession (Same CDS sequence) XM_002463544.2
    Accession Version XM_002463544.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1428bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497196800000
    Organism Sorghum bicolor(sorghum)
    Product probable polygalacturonase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012870.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 13, 2017 this sequence version replaced XM_002463544.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sorghum bicolor Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAAGAGAT CTGCATCTTT GTTTCAAGTC CTTTTGGTTT TCATAACCAT GGTTGAGATC 
    CAGTGGTCCA CCGTATCCAG CATATACTGC AAGGACATGC CGCCGAATGT ATATCGGCCT 
    CACAGTGTCA CAATAACTGA ATTTGGTGCC ATTGGGGATG GTGTGACCCT CAATACAAAG 
    GCATTCCAGA ATGCAATCTT CTATCTCAAT TCATTCGCGG ACAAGGGTGG TGCGCAGCTC 
    TTCGTGCCTG CTGGAAGGTG GCTGACAGGG AGTTTTAATC TTATCAGCCA TCTCACTTTA 
    TCACTGGACA AGGATGCGGT AATAATTGGA TCTCCGGATT CATCTCATTG GCCAGTTATT 
    GATCCTCTTC CATCCTATGG ACGAGGTAGA GAGCTTCCTG GAAAAAGGCA TCAGAGTCTG 
    ATTTTTGGAT TAAATCTGAC GGATGTAATT ATAACTGGTG CTAATGGTTC CATTGATGGT 
    CAAGGAGCTA TTTGGTGGGG CTGGTTCCGC AACCACACAT TGAATTATAC TAGACCACAT 
    CTTGTTGAGT TGATGTATTC TACCAATGTT GTCATATCTA ATCTAACCTT CAAGAACTCG 
    CCGTTTTGGA ATATCCACCC TGTATACTGC AGCCAAGTGC TTGTCCAGCA TGTCACAATC 
    CTTGCGCCTT TGAATTCACC AAACACAGAT GGTGTTAGTC CAGACTCCTC CACGAATGTG 
    TGCATCAATC ATTGCTATGT AAGAAATGGT GACGATGTTA TTGTCATTAA AAGTGGCTGG 
    GATGAGTACG GCATTTCATT TGCTCAACCA AGCTCCAATA TCAGCATAAG CGACATCACA 
    GGGGAGACAA GGGGTGGTGC AGGGATTGCC TTTGGAAGTG AGATGTCAGG TGGCATATCA 
    GAAGTCCGGG CTGTGGGCCT CCGCATTGTC AACTCCCTTC ATGGGATCAG AATCAAGACA 
    GCCCCAGGGC GTGGAGGGTA CGTGAAGAAT GTGTACATAG CCGATGTGAG CATGGACAAT 
    GTTTCAATGG CCATCAGGAT CACTGGAAAC TATGGTGAAC ATCCTGATGA CAAATATGAC 
    AGGACTGCTC TCCCTGTGAT AAGCAATATT ACAATCAAGG ATGTGGTTGG CGTTAACATT 
    GGCGTTGCTG GTATATTGGA AGGCATTCAG GGGGACAATT TCAGCAACAT TTGTCTGTCC 
    AATGTTTCCC TCAGTGTACA ATCTGCACAT CCATGGAATT GTTCACTTAT TGAAGGATAT 
    TCTAACTCAG TGATCCCAGA ATCATGCGAA CAGCTCAAAA GCAATTGTAG ACAGACACCC 
    ATTTGCTACG ATGGAAGCGG TTCTTCAGCA ATGCATGTGC AGCAACCAAG ACATACATCG 
    AGCACCAGCC GGTTGCTAAA TCCTTTACTG GAGTTGGCTT CATTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002463589.2
    CDS499..1926
    Translation

    Target ORF information:

    RefSeq Version XM_002463544.2
    Organism Sorghum bicolor(sorghum)
    Definition Sorghum bicolor probable polygalacturonase (LOC8079686), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002463544.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAAGAGAT CTGCATCTTT GTTTCAAGTC CTTTTGGTTT TCATAACCAT GGTTGAGATC 
    CAGTGGTCCA CCGTATCCAG CATATACTGC AAGGACATGC CGCCGAATGT ATATCGGCCT 
    CACAGTGTCA CAATAACTGA ATTTGGTGCC ATTGGGGATG GTGTGACCCT CAATACAAAG 
    GCATTCCAGA ATGCAATCTT CTATCTCAAT TCATTCGCGG ACAAGGGTGG TGCGCAGCTC 
    TTCGTGCCTG CTGGAAGGTG GCTGACAGGG AGTTTTAATC TTATCAGCCA TCTCACTTTA 
    TCACTGGACA AGGATGCGGT AATAATTGGA TCTCCGGATT CATCTCATTG GCCAGTTATT 
    GATCCTCTTC CATCCTATGG ACGAGGTAGA GAGCTTCCTG GAAAAAGGCA TCAGAGTCTG 
    ATTTTTGGAT TAAATCTGAC GGATGTAATT ATAACTGGTG CTAATGGTTC CATTGATGGT 
    CAAGGAGCTA TTTGGTGGGG CTGGTTCCGC AACCACACAT TGAATTATAC TAGACCACAT 
    CTTGTTGAGT TGATGTATTC TACCAATGTT GTCATATCTA ATCTAACCTT CAAGAACTCG 
    CCGTTTTGGA ATATCCACCC TGTATACTGC AGCCAAGTGC TTGTCCAGCA TGTCACAATC 
    CTTGCGCCTT TGAATTCACC AAACACAGAT GGTGTTAGTC CAGACTCCTC CACGAATGTG 
    TGCATCAATC ATTGCTATGT AAGAAATGGT GACGATGTTA TTGTCATTAA AAGTGGCTGG 
    GATGAGTACG GCATTTCATT TGCTCAACCA AGCTCCAATA TCAGCATAAG CGACATCACA 
    GGGGAGACAA GGGGTGGTGC AGGGATTGCC TTTGGAAGTG AGATGTCAGG TGGCATATCA 
    GAAGTCCGGG CTGTGGGCCT CCGCATTGTC AACTCCCTTC ATGGGATCAG AATCAAGACA 
    GCCCCAGGGC GTGGAGGGTA CGTGAAGAAT GTGTACATAG CCGATGTGAG CATGGACAAT 
    GTTTCAATGG CCATCAGGAT CACTGGAAAC TATGGTGAAC ATCCTGATGA CAAATATGAC 
    AGGACTGCTC TCCCTGTGAT AAGCAATATT ACAATCAAGG ATGTGGTTGG CGTTAACATT 
    GGCGTTGCTG GTATATTGGA AGGCATTCAG GGGGACAATT TCAGCAACAT TTGTCTGTCC 
    AATGTTTCCC TCAGTGTACA ATCTGCACAT CCATGGAATT GTTCACTTAT TGAAGGATAT 
    TCTAACTCAG TGATCCCAGA ATCATGCGAA CAGCTCAAAA GCAATTGTAG ACAGACACCC 
    ATTTGCTACG ATGGAAGCGG TTCTTCAGCA ATGCATGTGC AGCAACCAAG ACATACATCG 
    AGCACCAGCC GGTTGCTAAA TCCTTTACTG GAGTTGGCTT CATTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC8079686 ( XM_002463544.1 ) cDNA ORF clone, Sorghum bicolor(sorghum) -> XP_002463589.1 Sorghum bicolor hypothetical protein, mRNA.
    Price & Availability↑
    CloneID OSc24668
    Clone ID Related Accession (Same CDS sequence) XM_002463544.1
    Accession Version XM_002463544.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1380bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1247328000000
    Organism Sorghum bicolor(Sorghum)
    Product hypothetical protein
    Comment PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012870). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGTTGAGA TCCAGTGGTC CACCGTATCC AGCATATACT GCAAGGACAT GCCGCCGAAT 
    GTATATCGGC CTCACAGTGT CACAATAACT GAATTTGGTG CCATTGGGGA TGGTGTGACC 
    CTCAATACAA AGGCATTCCA GAATGCAATC TTCTATCTCA ATTCATTCGC GGACAAGGGT 
    GGTGCGCAGC TCTTCGTGCC TGCTGGAAGG TGGCTGACAG GGAGTTTTAA TCTTATCAGC 
    CATCTCACTT TATCACTGGA CAAGGATGCG GTAATAATTG GATCTCCGGA TTCATCTCAT 
    TGGCCAGTTA TTGATCCTCT TCCATCCTAT GGACGAGGTA GAGAGCTTCC TGGAAAAAGG 
    CATCAGAGTC TGATTTTTGG ATTAAATCTG ACGGATGTAA TTATAACTGG TGCTAATGGT 
    TCCATTGATG GTCAAGGAGC TATTTGGTGG GGCTGGTTCC GCAACCACAC ATTGAATTAT 
    ACTAGACCAC ATCTTGTTGA GTTGATGTAT TCTACCAATG TTGTCATATC TAATCTAACC 
    TTCAAGAACT CGCCGTTTTG GAATATCCAC CCTGTATACT GCAGCCAAGT GCTTGTCCAG 
    CATGTCACAA TCCTTGCGCC TTTGAATTCA CCAAACACAG ATGGTGTTAG TCCAGACTCC 
    TCCACGAATG TGTGCATCAA TCATTGCTAT GTAAGAAATG GTGACGATGT TATTGTCATT 
    AAAAGTGGCT GGGATGAGTA CGGCATTTCA TTTGCTCAAC CAAGCTCCAA TATCAGCATA 
    AGCGACATCA CAGGGGAGAC AAGGGGTGGT GCAGGGATTG CCTTTGGAAG TGAGATGTCA 
    GGTGGCATAT CAGAAGTCCG GGCTGTGGGC CTCCGCATTG TCAACTCCCT TCATGGGATC 
    AGAATCAAGA CAGCCCCAGG GCGTGGAGGG TACGTGAAGA ATGTGTACAT AGCCGATGTG 
    AGCATGGACA ATGTTTCAAT GGCCATCAGG ATCACTGGAA ACTATGGTGA ACATCCTGAT 
    GACAAATATG ACAGGACTGC TCTCCCTGTG ATAAGCAATA TTACAATCAA GGATGTGGTT 
    GGCGTTAACA TTGGCGTTGC TGGTATATTG GAAGGCATTC AGGGGGACAA TTTCAGCAAC 
    ATTTGTCTGT CCAATGTTTC CCTCAGTGTA CAATCTGCAC ATCCATGGAA TTGTTCACTT 
    ATTGAAGGAT ATTCTAACTC AGTGATCCCA GAATCATGCG AACAGCTCAA AAGCAATTGT 
    AGACAGACAC CCATTTGCTA CGATGGAAGC GGTTCTTCAG CAATGCATGT GCAGCAACCA 
    AGACATACAT CGAGCACCAG CCGGTTGCTA AATCCTTTAC TGGAGTTGGC TTCATTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002463589.1
    CDS1..1380
    Translation

    Target ORF information:

    RefSeq Version XM_002463544.1
    Organism Sorghum bicolor(Sorghum)
    Definition Sorghum bicolor hypothetical protein, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002463544.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGTTGAGA TCCAGTGGTC CACCGTATCC AGCATATACT GCAAGGACAT GCCGCCGAAT 
    GTATATCGGC CTCACAGTGT CACAATAACT GAATTTGGTG CCATTGGGGA TGGTGTGACC 
    CTCAATACAA AGGCATTCCA GAATGCAATC TTCTATCTCA ATTCATTCGC GGACAAGGGT 
    GGTGCGCAGC TCTTCGTGCC TGCTGGAAGG TGGCTGACAG GGAGTTTTAA TCTTATCAGC 
    CATCTCACTT TATCACTGGA CAAGGATGCG GTAATAATTG GATCTCCGGA TTCATCTCAT 
    TGGCCAGTTA TTGATCCTCT TCCATCCTAT GGACGAGGTA GAGAGCTTCC TGGAAAAAGG 
    CATCAGAGTC TGATTTTTGG ATTAAATCTG ACGGATGTAA TTATAACTGG TGCTAATGGT 
    TCCATTGATG GTCAAGGAGC TATTTGGTGG GGCTGGTTCC GCAACCACAC ATTGAATTAT 
    ACTAGACCAC ATCTTGTTGA GTTGATGTAT TCTACCAATG TTGTCATATC TAATCTAACC 
    TTCAAGAACT CGCCGTTTTG GAATATCCAC CCTGTATACT GCAGCCAAGT GCTTGTCCAG 
    CATGTCACAA TCCTTGCGCC TTTGAATTCA CCAAACACAG ATGGTGTTAG TCCAGACTCC 
    TCCACGAATG TGTGCATCAA TCATTGCTAT GTAAGAAATG GTGACGATGT TATTGTCATT 
    AAAAGTGGCT GGGATGAGTA CGGCATTTCA TTTGCTCAAC CAAGCTCCAA TATCAGCATA 
    AGCGACATCA CAGGGGAGAC AAGGGGTGGT GCAGGGATTG CCTTTGGAAG TGAGATGTCA 
    GGTGGCATAT CAGAAGTCCG GGCTGTGGGC CTCCGCATTG TCAACTCCCT TCATGGGATC 
    AGAATCAAGA CAGCCCCAGG GCGTGGAGGG TACGTGAAGA ATGTGTACAT AGCCGATGTG 
    AGCATGGACA ATGTTTCAAT GGCCATCAGG ATCACTGGAA ACTATGGTGA ACATCCTGAT 
    GACAAATATG ACAGGACTGC TCTCCCTGTG ATAAGCAATA TTACAATCAA GGATGTGGTT 
    GGCGTTAACA TTGGCGTTGC TGGTATATTG GAAGGCATTC AGGGGGACAA TTTCAGCAAC 
    ATTTGTCTGT CCAATGTTTC CCTCAGTGTA CAATCTGCAC ATCCATGGAA TTGTTCACTT 
    ATTGAAGGAT ATTCTAACTC AGTGATCCCA GAATCATGCG AACAGCTCAA AAGCAATTGT 
    AGACAGACAC CCATTTGCTA CGATGGAAGC GGTTCTTCAG CAATGCATGT GCAGCAACCA 
    AGACATACAT CGAGCACCAG CCGGTTGCTA AATCCTTTAC TGGAGTTGGC TTCATTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Sorghum bicolor genome and the diversification of grasses.
    Nature457(7229)551-6(2009 Jan)
    Paterson AH,Bowers JE,Bruggmann R,Dubchak I,Grimwood J,Gundlach H,Haberer G,Hellsten U,Mitros T,Poliakov A,Schmutz J,Spannagl M,Tang H,Wang X,Wicker T,Bharti AK,Chapman J,Feltus FA,Gowik U,Grigoriev IV,Lyons E,Maher CA,Martis M,Narechania A,Otillar RP,Penning BW,Salamov AA,Wang Y,Zhang L,Carpita NC,Freeling M,Gingle AR,Hash CT,Keller B,Klein P,Kresovich S,McCann MC,Ming R,Peterson DG,Mehboob-ur-Rahman,Ware D,Westhoff P,Mayer KF,Messing J,Rokhsar DS


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