Gene Symbol | LOC100155445 |
Entrez Gene ID | 100155445 |
Full Name | vesicle trafficking 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
Genome |
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ORF » Species Summary » Sus scrofa » LOC100155445 cDNA ORF clone
Gene Symbol | LOC100155445 |
Entrez Gene ID | 100155445 |
Full Name | vesicle trafficking 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(Pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021087276.1 | XP_020942935.1 | vacuolar protein sorting-associated protein VTA1 homolog isoform X2 |
XM_021087275.1 | XP_020942934.1 | vacuolar protein sorting-associated protein VTA1 homolog isoform X1 |
XM_013992516.1 | XP_013847970.1 | vacuolar protein sorting-associated protein VTA1 homolog |
Comparative analysis of protein coding sequences from human, mouse and the domesticated pig.
Jørgensen FG, Hobolth A, Hornshøj H, Bendixen C, Fredholm M, Schierup MH
BMC biology32(2005 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100155445 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100155445 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe229524 | |
Clone ID Related Accession (Same CDS sequence) | XM_021087276.1 | |
Accession Version | XM_021087276.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | vacuolar protein sorting-associated protein VTA1 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAAGCG GGACCCTGTG GTGGCATATT ACTCTTAAGA AACAGTTGGG TGACAATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020942935.1 |
CDS | 139..888 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACAAGCG GGACCCTGTG GTGGCATATT ACTCTTAAGA AACAGTTGGG TGACAATGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe30709 | |
Clone ID Related Accession (Same CDS sequence) | XM_021087275.1 , XM_013992516.1 | |
Accession Version | XM_021087275.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 924bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | vacuolar protein sorting-associated protein VTA1 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCGCGC TTGCTCCGCT GCCCCCGCTG CCTCCGCAGT TTAAGAGCAT TCAGCATCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020942934.1 |
CDS | 84..1007 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCGCGC TTGCTCCGCT GCCCCCGCTG CCTCCGCAGT TTAAGAGCAT TCAGCATCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe30709 | |
Clone ID Related Accession (Same CDS sequence) | XM_021087275.1 , XM_013992516.1 | |
Accession Version | XM_013992516.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 924bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | vacuolar protein sorting-associated protein VTA1 homolog | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609011.1) and transcript sequence (AY609536.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 786 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGGCCGCGC TTGCTCCGCT GCCCCCGCTG CCTCCGCAGT TTAAGAGCAT TCAGCATCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013847970.1 |
CDS | 9..932 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCGCGC TTGCTCCGCT GCCCCCGCTG CCTCCGCAGT TTAAGAGCAT TCAGCATCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Comparative analysis of protein coding sequences from human, mouse and the domesticated pig. |