LINJ_36_1420 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_36_1420
Entrez Gene ID	5073569
Full Name	putative Transitional endoplasmic reticulum ATPase
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001469431.1	XP_001469468.1	putative Transitional endoplasmic reticulum ATPase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_36_1420 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_36_1420 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc06772	XM_001469431.1 Latest version!	Leishmania infantum JPCM5 putative Transitional endoplasmic reticulum ATPase partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_36_1420 ( XM_001469431.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001469468.1 Leishmania infantum JPCM5 putative Transitional endoplasmic reticulum ATPase partial mRNA.

Price & Availability↑

CloneID	OLc06772
Clone ID Related Accession (Same CDS sequence)	XM_001469431.1
Accession Version	XM_001469431.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2073bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	putative Transitional endoplasmic reticulum ATPase
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009420). COMPLETENESS: incomplete on both ends.

ATGGCGGACG CTGTTGGGAA CACAAACTCG AAGGTGAAGC TAAACAAGCT GATCGTCGAG 
GAGCCGTACA ATGATGACAA CAGTGTTGTA TCGCTGAACC CGAAGCGGAT GGAGGAGCTG 
AACATCTTCC GCGGTGACAC CGTTCTCGTG AAGGGCAAGA AACACCGCAG CACCGTCTGC 
ATCGCGATGG AGGACGACGA GTGCCCGCCG GAGAAAATCA AGATGAACAA AGTCGCGCGC 
CGCAACATCC GCATTCACCT CGGCGACACC ATTCGCATCG TGCCCTGCAA GGATGTTCCA 
TACGGAAACC GCGTTCACCT GCTGCCAATC GATGACACAG TGGAGAACCT CACTGGTGAC 
TTGTTCGAGA ACTTCTTGAA GCCATACTTT TTGGAGTCGT ACCGGCCTGT GAAGAAGGGC 
GACTCCTTTG TCTGCCGTGG CGCTATGCGC TCTGTGGAAT TCAAGGTAGT GGAGGTGGAC 
CCGGGTGATT ACTGCATCGT GTCGCCGGAC ACAATCATCC ATTCCGAGGG TGATCCGATC 
CATCGAGAGG ACGAGGAGGC GCTTGACGGA GTCGGCTACG ACGACATTTG GTGGTTGCCG 
CAAGCAGCTG AACCAGATCC GAGAGATGGT CGAGCTGCCC ATTCGCCACC CAGAGCTGTT 
CAAGAACAAC TTCTAACCCT AATGGACGGC ATGAAATCGC GCTCGCAGGT GATCGTGATG 
GCGGCGACGA ACCGCCCGAA CACCATCGAT CCAGCCTTGC GCCGTTTTGG CCGCTTCGAC 
CGCGAGCTCG ACATCGGCGT GCCGGACGAG ACTGGCCGCT TGGAGATCAT TCGTATCCAC 
ACCAAGAACA TGAAGCTGGC CGACGACATT GATCTGGAGA AGGTGGCAAA GGACTCGCAC 
GGCTTTGTCG GCGCCGATTT GGCGCAGCTC TGCACCGAGG CCGCCATGCA GTGCATTCGC 
GAGAAGCTGT CCATCATCGA CTGGGAGGAC GACACCATCG ATGTCGAGGT GATGAACGCG 
ATGTGTGTAA CGCAGGAGCA CTTTCGCGAG GCCATGGCGA AGACGAACCC GTCCGCGCTG 
CGCGAGACAC AGGTGGAAAC GCCGAACGTC GTCTGGGAGG ATGTGGGCGG CCTCCTCGAC 
GTCAAGCGCG AGCTGCAGGA GCTGGTGCAG TACCCCGTCG AGTACCCGTG GAAGTTTGAG 
AAGTACGGCA TGTCGCCGCC GAAGGGTGTC CTCTTCTACG GCCCACCCGG TTGCGGTAAG 
ACGCTGCTGG CCAAGGCGAT TGCGACGGAG TGCCAGGCGA ACTTCATCTC CATCAAAGGC 
CCGGAGCTTC TGACAATGTG GTTCGGTGAA TCGGAGGCGA ATGTGCGCGA CGTCTTCGAC 
AAGGCTCGTG CTGCGGCCCC TTGCGTGCTC TTTTTTGATG AACTGGACTC CGTGGCCAAG 
TCCCGCGGCG CCCACGGCGA CGGAGGCGCG AGCGACCGCG TGATCAACCA AATCCTGACA 
GAGATGGACG GCATGAACGT CAAGAAGAAT GTCTTCATTA TCGGTGCGAC GAACCGGCCA 
GACGTGCTGG ACCCTGCGAT CATGCGTCCT GGGCGTCTCG ACCAGCTCAT CTACATCCCA 
TTGCCCGACA AGGCGTCTCG TGTGGCCATT ATCAAGGCGA GCTTCCGTAA GTCGCCGCTA 
GCCTCCGACG TCGACGTGGA TCAGATTGCC GCCGCCACGC ACGGCTTCTC CGGCGCCGAC 
TTGTCTGGCA TCTGCCAGCG CGCGTGCAAG ATGGCAATCC GCGAGTCGAT CAACAAGGAA 
ATTCAGCTCG AGGAGCTGAA GAAGATCGGG CAGTTGGACG AAAACGCTGA TATCGACCCG 
GTGCCGGAGA TCACGCGCGC TCACGTGGAG GAGGCAATGC GCGGTGCCCG CCGCTCCGTC 
TCTGACGCGG ACATTCGGCG CTACGATATG TTCAAGACCT CCTTGCAGCA GAGCCGCACC 
TTCGGTGCTA GTAACCCGCC CCCAGCGGAG GCCGGTGCGC CTGCTGGCAG CGGGGCGCCG 
CCGCCAGCGG ACGACGACGA CCTCTACAGC TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001469468.1
CDS	1..2073
Translation	MADAVGNTNSKVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTVCIAMEDDECPPEKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLLPIDDTVENLTGDLFENFLKPYFLESYRPVKKGDSFVCRGAMRSVEFKVVEVDPGDYCIVSPDTIIHSEGDPIHREDEEALDGVGYDDIWWLPQAAEPDPRDGRAAHSPPRAVQEQLLTLMDGMKSRSQVIVMAATNRPNTIDPALRRFGRFDRELDIGVPDETGRLEIIRIHTKNMKLADDIDLEKVAKDSHGFVGADLAQLCTEAAMQCIREKLSIIDWEDDTIDVEVMNAMCVTQEHFREAMAKTNPSALRETQVETPNVVWEDVGGLLDVKRELQELVQYPVEYPWKFEKYGMSPPKGVLFYGPPGCGKTLLAKAIATECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSVAKSRGAHGDGGASDRVINQILTEMDGMNVKKNVFIIGATNRPDVLDPAIMRPGRLDQLIYIPLPDKASRVAIIKASFRKSPLASDVDVDQIAAATHGFSGADLSGICQRACKMAIRESINKEIQLEELKKIGQLDENADIDPVPEITRAHVEEAMRGARRSVSDADIRRYDMFKTSLQQSRTFGASNPPPAEAGAPAGSGAPPPADDDDLYS

Target ORF information:

RefSeq Version	XM_001469431.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative Transitional endoplasmic reticulum ATPase partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001469431.1

ORF Insert Sequence:

ATGGCGGACG CTGTTGGGAA CACAAACTCG AAGGTGAAGC TAAACAAGCT GATCGTCGAG 
GAGCCGTACA ATGATGACAA CAGTGTTGTA TCGCTGAACC CGAAGCGGAT GGAGGAGCTG 
AACATCTTCC GCGGTGACAC CGTTCTCGTG AAGGGCAAGA AACACCGCAG CACCGTCTGC 
ATCGCGATGG AGGACGACGA GTGCCCGCCG GAGAAAATCA AGATGAACAA AGTCGCGCGC 
CGCAACATCC GCATTCACCT CGGCGACACC ATTCGCATCG TGCCCTGCAA GGATGTTCCA 
TACGGAAACC GCGTTCACCT GCTGCCAATC GATGACACAG TGGAGAACCT CACTGGTGAC 
TTGTTCGAGA ACTTCTTGAA GCCATACTTT TTGGAGTCGT ACCGGCCTGT GAAGAAGGGC 
GACTCCTTTG TCTGCCGTGG CGCTATGCGC TCTGTGGAAT TCAAGGTAGT GGAGGTGGAC 
CCGGGTGATT ACTGCATCGT GTCGCCGGAC ACAATCATCC ATTCCGAGGG TGATCCGATC 
CATCGAGAGG ACGAGGAGGC GCTTGACGGA GTCGGCTACG ACGACATTTG GTGGTTGCCG 
CAAGCAGCTG AACCAGATCC GAGAGATGGT CGAGCTGCCC ATTCGCCACC CAGAGCTGTT 
CAAGAACAAC TTCTAACCCT AATGGACGGC ATGAAATCGC GCTCGCAGGT GATCGTGATG 
GCGGCGACGA ACCGCCCGAA CACCATCGAT CCAGCCTTGC GCCGTTTTGG CCGCTTCGAC 
CGCGAGCTCG ACATCGGCGT GCCGGACGAG ACTGGCCGCT TGGAGATCAT TCGTATCCAC 
ACCAAGAACA TGAAGCTGGC CGACGACATT GATCTGGAGA AGGTGGCAAA GGACTCGCAC 
GGCTTTGTCG GCGCCGATTT GGCGCAGCTC TGCACCGAGG CCGCCATGCA GTGCATTCGC 
GAGAAGCTGT CCATCATCGA CTGGGAGGAC GACACCATCG ATGTCGAGGT GATGAACGCG 
ATGTGTGTAA CGCAGGAGCA CTTTCGCGAG GCCATGGCGA AGACGAACCC GTCCGCGCTG 
CGCGAGACAC AGGTGGAAAC GCCGAACGTC GTCTGGGAGG ATGTGGGCGG CCTCCTCGAC 
GTCAAGCGCG AGCTGCAGGA GCTGGTGCAG TACCCCGTCG AGTACCCGTG GAAGTTTGAG 
AAGTACGGCA TGTCGCCGCC GAAGGGTGTC CTCTTCTACG GCCCACCCGG TTGCGGTAAG 
ACGCTGCTGG CCAAGGCGAT TGCGACGGAG TGCCAGGCGA ACTTCATCTC CATCAAAGGC 
CCGGAGCTTC TGACAATGTG GTTCGGTGAA TCGGAGGCGA ATGTGCGCGA CGTCTTCGAC 
AAGGCTCGTG CTGCGGCCCC TTGCGTGCTC TTTTTTGATG AACTGGACTC CGTGGCCAAG 
TCCCGCGGCG CCCACGGCGA CGGAGGCGCG AGCGACCGCG TGATCAACCA AATCCTGACA 
GAGATGGACG GCATGAACGT CAAGAAGAAT GTCTTCATTA TCGGTGCGAC GAACCGGCCA 
GACGTGCTGG ACCCTGCGAT CATGCGTCCT GGGCGTCTCG ACCAGCTCAT CTACATCCCA 
TTGCCCGACA AGGCGTCTCG TGTGGCCATT ATCAAGGCGA GCTTCCGTAA GTCGCCGCTA 
GCCTCCGACG TCGACGTGGA TCAGATTGCC GCCGCCACGC ACGGCTTCTC CGGCGCCGAC 
TTGTCTGGCA TCTGCCAGCG CGCGTGCAAG ATGGCAATCC GCGAGTCGAT CAACAAGGAA 
ATTCAGCTCG AGGAGCTGAA GAAGATCGGG CAGTTGGACG AAAACGCTGA TATCGACCCG 
GTGCCGGAGA TCACGCGCGC TCACGTGGAG GAGGCAATGC GCGGTGCCCG CCGCTCCGTC 
TCTGACGCGG ACATTCGGCG CTACGATATG TTCAAGACCT CCTTGCAGCA GAGCCGCACC 
TTCGGTGCTA GTAACCCGCC CCCAGCGGAG GCCGGTGCGC CTGCTGGCAG CGGGGCGCCG 
CCGCCAGCGG ACGACGACGA CCTCTACAGC TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_36_1420 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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