LINJ_25_0170 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_25_0170
Entrez Gene ID	5069481
Full Name	putative cleavage and polyadenylation specificity factor
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466013.1	XP_001466050.1	putative cleavage and polyadenylation specificity factor

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_25_0170 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_25_0170 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc03120	XM_001466013.1 Latest version!	Leishmania infantum JPCM5 putative cleavage and polyadenylation specificity factor partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_25_0170 ( XM_001466013.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466050.1 Leishmania infantum JPCM5 putative cleavage and polyadenylation specificity factor partial mRNA.

Price & Availability↑

CloneID	OLc03120
Clone ID Related Accession (Same CDS sequence)	XM_001466013.1
Accession Version	XM_001466013.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2460bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	putative cleavage and polyadenylation specificity factor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009409). COMPLETENESS: incomplete on both ends.

ATGCTGCGCG CCTCAGCAGG CAGTATTCAG TTCACTTCGG TGTACGAGTG CACTACCCCT 
AATGCGCCCT ATGCCTACCT CATCGAGATC GACGGGGTGC GCATCCTCTT CGACTGCGGA 
TGGAACGATG AGTTCGACAC GTCCTTCCTC AGCAAGCTGA AGCCGCACCT GCCAACCGTG 
CATGCCGTGG TCCTGTCGAG CCCGCACATC ACCGCCTGCG GCGCCCTTCC TTTTGTCCTC 
AGCCACATCT CACCCGGCAC GTTCGTGGCG GCGGCCGGTG GCACATCAAA AGTCGGCGTG 
CACAGTGTCC TGCACTCCTT CCTTTACCAG TACCCGAACT CGCACACGTT CACCCTCGCG 
GATGGGGAGG CCTTTACGAT GACGGTGGAT TCCATCTACC ACAGCTTCCG TTCTCTCCGC 
GAGCCATACG GCGGCAAGGT CACCGTGAAA AACGGCGACG TCGAGGTCAA CTGCCTCGCC 
GTCTTTGCTG GCCGCATGCT GGGCGGCTAC AGCTGGATAA TCAAGTACCA AATCGATGAG 
CTATTCTACT GCCCCGACTT CTCGGTGAAG CCGTCGTACG CGCTGAAGCC GTTTGACGTG 
CCGACCACTG CGAACATCGT GCTTGCGAGC AGCTTTCCTT TTCACATGAC CGGCTCGAAT 
CGGACGACCA AATACGAGGA GCAACTGAAA AACCTCTTCA AGGAATTCCA GCACACCCTG 
CGTGGTGGCA GTGACGTTCT CGTGCCTGTG AACGTCGCAG GTCGTGGGCT GGAGGTATTG 
AACATTATTG TGCACCTCTT GGCGGAGCAG GGCGGCGACA AGTACAAGGT TGTTCTGGTG 
GCTGCCCAGG CACAGGAGCT GCTCGACAAG GCGGGCACCA TGACGGAGGC TCTGCAAGAC 
TACTTGATCC TCGATGATAA GCGCCTCTTT GCCAACGTCC TCACGTGTCG CAGCGCGGAG 
GAGGTGCTCC CGATCCAGGG CCCGAAGATC TGTGTCGCAG ACGGTGCCTC CCTCGACTTT 
GGGCCCTCCG CAGAGCTGCT CGAGTACTTC GTGAAGGGGA ACCGCGACGG CGCCGATCAC 
CTCATCGTCT TGACGGAGCC GCCGTTGCCA GGGACGAACG CGGCCGTTGT CACCGCCGCC 
GCCGACGGCG AGCGTCTCCA CATGCAAATC ACGCGCCGCA GTCGGTTAAG TGGGGAGGAG 
TTAGAGGAAT ACTACATTGA GCTCGAGCAC GAAATGGAGC AGCGACGGCG CGAGTTGGAG 
GCGCGGAGCG CCTTCCAGAT TGTGCAAGAC GACGACGAGG CTGCAACTGT CAAAGGAGAA 
GAGAACGACG ACGACGACGA CGACGACGGC GAGTGTGCGA CGGCGGCGAC AGGTCACCGC 
GGCGCAACTG AGAAAGCTGC CGCCTGCGCC GGCGCCAAGG ATGCCGTCGC CGCATCCAAG 
GCGAAGGCGG CGACGACCCT TGGCTTGGTG CTGCCGCCCC CGCTACACTA CCATTCGAAG 
CATCTCAGCT TTCCCGTGCT GGAGACCACG AGCACTCTGA GCGCGGCGGC GCTGAAGCGC 
GTCGATGTGA CGTACGGACT CCCTGTCAGC GAGGAGGAGC AGGTCTTGCT GCAGAAACGC 
GCGCCTGCAC GGCAGCACAG CGATGCGGGG CCAGAGGCGT TGCAGGTAGA AAACGATGCG 
CAGCGACTCG CTAACATCCC ATCGAAGGTG TCGCGGGTTG CCGTGCAGGT GAACCGGCGC 
TGCCGCGTTG TCCTGTCCGA CCTCAGCGGG TATCCCGACG CGCTCACCAT GAAGAGCGTC 
CTCAAGACAA AATGGACGTT TGCAAAGAAG ATTGTCGGAC TTCGCGGCAG CGCCGAAGAC 
GGACGGGCGT TCCTGCACTT CTGTCGCGCC GACAAGGCGA TGAAGTGCGG CTCGAACGTT 
TTCAGCACCA CCTCCTGTGG CGTGCCGCTG GAACTGGCGA CGCACGTGTA CTCGTATGCG 
GTGCAGCTGG AGTCGAGTCT GGCGCGTAGC CTGTCGCGCG GCCTCCGCCG TGTTCGCGAG 
ACAAAGTCGA AGAGCACGTG GGAGGTTGGG TGGGTCAACG GTGAACTCTC TGGCGTGCGT 
GCAGAGGCCG ACCTCGAGGA ACAAGAGATG CAGCGCCGTC GCTCCGATCG GGCCATCTAC 
TCCCTCGCCT CTGTGACAGC GGACAAGTCG CAGGCGTGCG CGACACAGCG GGAGCAGCGC 
GGGCTGCAGA GCGGCTCCTT CTTTGTCGGG GACATGGACC TGCGCCGCCT GCGCGAGACG 
TCACGACAGG AAAGCGGGCT GTACAGCGAG TTTCACAAGA AGGCGCCGCT TCTCGTCTTT 
GACGAAGGCG TGTGTGTCCG CAAAGGCGCG GACGGCACCG TCACGATCTC TTCCATTGCC 
ACCCCAGCAC TGTTTGATCT TCGCCGCACT GTTTACCGGC AGTACTCGCA GGCGCTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466050.1
CDS	1..2460
Translation	MLRASAGSIQFTSVYECTTPNAPYAYLIEIDGVRILFDCGWNDEFDTSFLSKLKPHLPTVHAVVLSSPHITACGALPFVLSHISPGTFVAAAGGTSKVGVHSVLHSFLYQYPNSHTFTLADGEAFTMTVDSIYHSFRSLREPYGGKVTVKNGDVEVNCLAVFAGRMLGGYSWIIKYQIDELFYCPDFSVKPSYALKPFDVPTTANIVLASSFPFHMTGSNRTTKYEEQLKNLFKEFQHTLRGGSDVLVPVNVAGRGLEVLNIIVHLLAEQGGDKYKVVLVAAQAQELLDKAGTMTEALQDYLILDDKRLFANVLTCRSAEEVLPIQGPKICVADGASLDFGPSAELLEYFVKGNRDGADHLIVLTEPPLPGTNAAVVTAAADGERLHMQITRRSRLSGEELEEYYIELEHEMEQRRRELEARSAFQIVQDDDEAATVKGEENDDDDDDDGECATAATGHRGATEKAAACAGAKDAVAASKAKAATTLGLVLPPPLHYHSKHLSFPVLETTSTLSAAALKRVDVTYGLPVSEEEQVLLQKRAPARQHSDAGPEALQVENDAQRLANIPSKVSRVAVQVNRRCRVVLSDLSGYPDALTMKSVLKTKWTFAKKIVGLRGSAEDGRAFLHFCRADKAMKCGSNVFSTTSCGVPLELATHVYSYAVQLESSLARSLSRGLRRVRETKSKSTWEVGWVNGELSGVRAEADLEEQEMQRRRSDRAIYSLASVTADKSQACATQREQRGLQSGSFFVGDMDLRRLRETSRQESGLYSEFHKKAPLLVFDEGVCVRKGADGTVTISSIATPALFDLRRTVYRQYSQAL

Target ORF information:

RefSeq Version	XM_001466013.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative cleavage and polyadenylation specificity factor partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466013.1

ORF Insert Sequence:

ATGCTGCGCG CCTCAGCAGG CAGTATTCAG TTCACTTCGG TGTACGAGTG CACTACCCCT 
AATGCGCCCT ATGCCTACCT CATCGAGATC GACGGGGTGC GCATCCTCTT CGACTGCGGA 
TGGAACGATG AGTTCGACAC GTCCTTCCTC AGCAAGCTGA AGCCGCACCT GCCAACCGTG 
CATGCCGTGG TCCTGTCGAG CCCGCACATC ACCGCCTGCG GCGCCCTTCC TTTTGTCCTC 
AGCCACATCT CACCCGGCAC GTTCGTGGCG GCGGCCGGTG GCACATCAAA AGTCGGCGTG 
CACAGTGTCC TGCACTCCTT CCTTTACCAG TACCCGAACT CGCACACGTT CACCCTCGCG 
GATGGGGAGG CCTTTACGAT GACGGTGGAT TCCATCTACC ACAGCTTCCG TTCTCTCCGC 
GAGCCATACG GCGGCAAGGT CACCGTGAAA AACGGCGACG TCGAGGTCAA CTGCCTCGCC 
GTCTTTGCTG GCCGCATGCT GGGCGGCTAC AGCTGGATAA TCAAGTACCA AATCGATGAG 
CTATTCTACT GCCCCGACTT CTCGGTGAAG CCGTCGTACG CGCTGAAGCC GTTTGACGTG 
CCGACCACTG CGAACATCGT GCTTGCGAGC AGCTTTCCTT TTCACATGAC CGGCTCGAAT 
CGGACGACCA AATACGAGGA GCAACTGAAA AACCTCTTCA AGGAATTCCA GCACACCCTG 
CGTGGTGGCA GTGACGTTCT CGTGCCTGTG AACGTCGCAG GTCGTGGGCT GGAGGTATTG 
AACATTATTG TGCACCTCTT GGCGGAGCAG GGCGGCGACA AGTACAAGGT TGTTCTGGTG 
GCTGCCCAGG CACAGGAGCT GCTCGACAAG GCGGGCACCA TGACGGAGGC TCTGCAAGAC 
TACTTGATCC TCGATGATAA GCGCCTCTTT GCCAACGTCC TCACGTGTCG CAGCGCGGAG 
GAGGTGCTCC CGATCCAGGG CCCGAAGATC TGTGTCGCAG ACGGTGCCTC CCTCGACTTT 
GGGCCCTCCG CAGAGCTGCT CGAGTACTTC GTGAAGGGGA ACCGCGACGG CGCCGATCAC 
CTCATCGTCT TGACGGAGCC GCCGTTGCCA GGGACGAACG CGGCCGTTGT CACCGCCGCC 
GCCGACGGCG AGCGTCTCCA CATGCAAATC ACGCGCCGCA GTCGGTTAAG TGGGGAGGAG 
TTAGAGGAAT ACTACATTGA GCTCGAGCAC GAAATGGAGC AGCGACGGCG CGAGTTGGAG 
GCGCGGAGCG CCTTCCAGAT TGTGCAAGAC GACGACGAGG CTGCAACTGT CAAAGGAGAA 
GAGAACGACG ACGACGACGA CGACGACGGC GAGTGTGCGA CGGCGGCGAC AGGTCACCGC 
GGCGCAACTG AGAAAGCTGC CGCCTGCGCC GGCGCCAAGG ATGCCGTCGC CGCATCCAAG 
GCGAAGGCGG CGACGACCCT TGGCTTGGTG CTGCCGCCCC CGCTACACTA CCATTCGAAG 
CATCTCAGCT TTCCCGTGCT GGAGACCACG AGCACTCTGA GCGCGGCGGC GCTGAAGCGC 
GTCGATGTGA CGTACGGACT CCCTGTCAGC GAGGAGGAGC AGGTCTTGCT GCAGAAACGC 
GCGCCTGCAC GGCAGCACAG CGATGCGGGG CCAGAGGCGT TGCAGGTAGA AAACGATGCG 
CAGCGACTCG CTAACATCCC ATCGAAGGTG TCGCGGGTTG CCGTGCAGGT GAACCGGCGC 
TGCCGCGTTG TCCTGTCCGA CCTCAGCGGG TATCCCGACG CGCTCACCAT GAAGAGCGTC 
CTCAAGACAA AATGGACGTT TGCAAAGAAG ATTGTCGGAC TTCGCGGCAG CGCCGAAGAC 
GGACGGGCGT TCCTGCACTT CTGTCGCGCC GACAAGGCGA TGAAGTGCGG CTCGAACGTT 
TTCAGCACCA CCTCCTGTGG CGTGCCGCTG GAACTGGCGA CGCACGTGTA CTCGTATGCG 
GTGCAGCTGG AGTCGAGTCT GGCGCGTAGC CTGTCGCGCG GCCTCCGCCG TGTTCGCGAG 
ACAAAGTCGA AGAGCACGTG GGAGGTTGGG TGGGTCAACG GTGAACTCTC TGGCGTGCGT 
GCAGAGGCCG ACCTCGAGGA ACAAGAGATG CAGCGCCGTC GCTCCGATCG GGCCATCTAC 
TCCCTCGCCT CTGTGACAGC GGACAAGTCG CAGGCGTGCG CGACACAGCG GGAGCAGCGC 
GGGCTGCAGA GCGGCTCCTT CTTTGTCGGG GACATGGACC TGCGCCGCCT GCGCGAGACG 
TCACGACAGG AAAGCGGGCT GTACAGCGAG TTTCACAAGA AGGCGCCGCT TCTCGTCTTT 
GACGAAGGCG TGTGTGTCCG CAAAGGCGCG GACGGCACCG TCACGATCTC TTCCATTGCC 
ACCCCAGCAC TGTTTGATCT TCGCCGCACT GTTTACCGGC AGTACTCGCA GGCGCTATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_25_0170 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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