Rpn5 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rpn5
Entrez Gene ID	40717
Full Name	Regulatory particle non-ATPase 5
Synonyms	CG1100,Dmel\CG1100,p55,rpn5
General protein information	Preferred Names Regulatory particle non-ATPase 5 Names CG1100 gene product from transcript CG1100-RA CG1100-PA Rpn5-PA regulatory particle non-ATPase 5
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 83C4-83C4

mRNA and Protein(s)

mRNA	Protein	Name
NM_141331.3	NP_649588.1	regulatory particle non-ATPase 5

Pathways from BioSystems

Homologies

Magnaporthe oryzae (rice blast fungus)	MGG_02608	XP_003721188.1
Macaca mulatta (Rhesus monkey)	PSMD12	XP_001116817.1
Bos taurus (cattle)	PSMD12	NP_001039893.1
Oryza sativa (rice)	Os03g0851300	NP_001051914.1
Gallus gallus (chicken)	LOC100859465	XP_003642387.1
Homo sapiens (human)	PSMD12	NP_002807.1
Mus musculus (house mouse)	Psmd12	NP_080170.1
Gallus gallus (chicken)	PSMD12	NP_001025877.1
Danio rerio (zebrafish)	psmd12	NP_963872.1
Arabidopsis thaliana (thale cress)	RPN5B	NP_001032142.1
Schizosaccharomyces pombe (fission yeast)	rpn502	NP_594776.1
Kluyveromyces lactis	KLLA0C16313g	XP_452929.1
Neurospora crassa	NCU02650	XP_965423.1
Schizosaccharomyces pombe (fission yeast)	rpn501	NP_593278.1
Drosophila melanogaster (fruit fly)	Rpn5	NP_649588.1
Arabidopsis thaliana (thale cress)	EMB2107	NP_974758.1
Pan troglodytes (chimpanzee)	PSMD12	XP_511639.2
Canis lupus familiaris (dog)	PSMD12	XP_537584.2
Rattus norvegicus (Norway rat)	Psmd12	NP_001005875.1
Eremothecium gossypii	AGOS_ADR073W	NP_984169.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005535	XP_556176.3
Caenorhabditis elegans (roundworm)	rpn-5	NP_494835.1
Saccharomyces cerevisiae (baker's yeast)	RPN5	NP_010134.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rpn5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rpn5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa04003	NM_141331.3 Latest version!	Drosophila melanogaster regulatory particle non-ATPase 5 (Rpn5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rpn5 ( NM_141331.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_649588.1 Drosophila melanogaster regulatory particle non-ATPase 5 (Rpn5), mRNA.

Price & Availability↑

CloneID	OFa04003
Clone ID Related Accession (Same CDS sequence)	NM_141331.3
Accession Version	NM_141331.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1509bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	regulatory particle non-ATPase 5
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_141331.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGACACCT ATTTGTTTGA TGGCGGCCGC ATCACCAAGA TGGAGGTGGA CTACGAGCCG 
GCGTGCAACG AGAAAATCCC CCTGGCTAAG GAGCTGGCCA AGAAAAACCC CGACGCCTTT 
CACGAAGCCA TCGAGATGAT GCTACAACTG GAGAAGCAGA CGCGCCTGGG CGCCGACATG 
GTTTCTTGCT CACGAGTCCT GGTTGCCATC TGTCAGATCT GCTTTGACGC GTCCAACTGG 
AACGCCCTCA ACGAGTACGT GTCTCTGCTG GTACGCCGTC GCTCCCAGCT GAAGCAGGCT 
GTGGTCAAGA TGATCCAGGA GTGCGTCACG TACGTGGACA AGACGCCCGA CAAAGAGACT 
AAGCTGAAGC TTATCGACAC ACTTCGCTCG GTTACCGAGG GCAAGATTTA CGTTGAGATC 
GAGCGGGCCC GTCTTACTAA GATTCTGGCG GACATTAAGG AAGCCGATGG CGATGTCGCC 
GGAGCTGCCA CTGTCATGGA GGAGCTTCAA GTGGAGACTT ATGGCTCGAT GGATAAGCGC 
GAGAAGGTGG AGCTCATCCT GGAGCAGATG CGCCTTTGTC TGTTGAAGGA GGATTACGTA 
TCCACGCAGA TCATTGCCAA GAAGATCAGT ATAAAGTTCT TTGACGATCC GGCACAGCAT 
GATCTGAAGC TGAAGTTCTA CTATCTAATG ATTCAGTTGA ACAGAGACAC CTCCTTCCTG 
AATACTTCGC GCCATTATCA GGCCATAGCG GAGCCTCCGC GCAAGAAGAC TGGCCTTACA 
CCCGTAGACT CTGCCGCGTC CACGGATGAG CAAAAAAAGA AGGATGACGA TAAGAAAAAG 
AAGGAGGAAG ATGACAAGGA TAAGAAGCCA GAGGTTGCTA CAGAGGCTGA GGTCGAAATT 
GAACTTACCG AGGAGCAGAA GAAGGAACTG ACGGAAAAGC TGGTTTGTGC CGTGCTTTAT 
TGCGTTTTAG CTCCCTTCGA CAACGAACAG AGCGACATGA TGGCACATCT TTCGAAGAAC 
AAGAAGCTGG AGGAAGTGCC CGCCTATAAG GAAATTCTGC GCTTGTTCAT GTCAAAGGAG 
CTGATCAACT TCGACACATT TAATGCAGAC TTTGGGCTCG TGTTGGCTGA AAACGAGATG 
TTCAAGGATA GCACCAAGCA TGGCAAGAAA TGTATCACCG AGCTTAAGGA TCGTCTGATA 
GAGCATAACA TTCGCATCAT TGCCATGTAT TACTCCCGCC TGCATTTGGC GCGCATGAGT 
GAGCTGCTGA ACCTGCCCAC CAGCCGCTGC GAGGAGTATC TTTCTAAACT GGCCAACACC 
GACACCATCC GCGTAAAGAT CGACCGTCCC GCCGGCATCA TTTACTTCAC CCAAAAAAAG 
AGCGCCTCCG ACATCCTGAA CAACTGGGCC ACCGACGTCA ACCAGCTGAT GTCCCTGGTC 
AACAAGACCT GCCACTTGAT TAACAAGGAA GAGTGCGTCT ACTCCGTCAT GTGTGCTGTC 
GAGGATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_649588.1
CDS	225..1733
Translation	MDTYLFDGGRITKMEVDYEPACNEKIPLAKELAKKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLVAICQICFDASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTLRSVTEGKIYVEIERARLTKILADIKEADGDVAGAATVMEELQVETYGSMDKREKVELILEQMRLCLLKEDYVSTQIIAKKISIKFFDDPAQHDLKLKFYYLMIQLNRDTSFLNTSRHYQAIAEPPRKKTGLTPVDSAASTDEQKKKDDDKKKKEEDDKDKKPEVATEAEVEIELTEEQKKELTEKLVCAVLYCVLAPFDNEQSDMMAHLSKNKKLEEVPAYKEILRLFMSKELINFDTFNADFGLVLAENEMFKDSTKHGKKCITELKDRLIEHNIRIIAMYYSRLHLARMSELLNLPTSRCEEYLSKLANTDTIRVKIDRPAGIIYFTQKKSASDILNNWATDVNQLMSLVNKTCHLINKEECVYSVMCAVED

Target ORF information:

RefSeq Version	NM_141331.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster regulatory particle non-ATPase 5 (Rpn5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_141331.3

ORF Insert Sequence:

ATGGACACCT ATTTGTTTGA TGGCGGCCGC ATCACCAAGA TGGAGGTGGA CTACGAGCCG 
GCGTGCAACG AGAAAATCCC CCTGGCTAAG GAGCTGGCCA AGAAAAACCC CGACGCCTTT 
CACGAAGCCA TCGAGATGAT GCTACAACTG GAGAAGCAGA CGCGCCTGGG CGCCGACATG 
GTTTCTTGCT CACGAGTCCT GGTTGCCATC TGTCAGATCT GCTTTGACGC GTCCAACTGG 
AACGCCCTCA ACGAGTACGT GTCTCTGCTG GTACGCCGTC GCTCCCAGCT GAAGCAGGCT 
GTGGTCAAGA TGATCCAGGA GTGCGTCACG TACGTGGACA AGACGCCCGA CAAAGAGACT 
AAGCTGAAGC TTATCGACAC ACTTCGCTCG GTTACCGAGG GCAAGATTTA CGTTGAGATC 
GAGCGGGCCC GTCTTACTAA GATTCTGGCG GACATTAAGG AAGCCGATGG CGATGTCGCC 
GGAGCTGCCA CTGTCATGGA GGAGCTTCAA GTGGAGACTT ATGGCTCGAT GGATAAGCGC 
GAGAAGGTGG AGCTCATCCT GGAGCAGATG CGCCTTTGTC TGTTGAAGGA GGATTACGTA 
TCCACGCAGA TCATTGCCAA GAAGATCAGT ATAAAGTTCT TTGACGATCC GGCACAGCAT 
GATCTGAAGC TGAAGTTCTA CTATCTAATG ATTCAGTTGA ACAGAGACAC CTCCTTCCTG 
AATACTTCGC GCCATTATCA GGCCATAGCG GAGCCTCCGC GCAAGAAGAC TGGCCTTACA 
CCCGTAGACT CTGCCGCGTC CACGGATGAG CAAAAAAAGA AGGATGACGA TAAGAAAAAG 
AAGGAGGAAG ATGACAAGGA TAAGAAGCCA GAGGTTGCTA CAGAGGCTGA GGTCGAAATT 
GAACTTACCG AGGAGCAGAA GAAGGAACTG ACGGAAAAGC TGGTTTGTGC CGTGCTTTAT 
TGCGTTTTAG CTCCCTTCGA CAACGAACAG AGCGACATGA TGGCACATCT TTCGAAGAAC 
AAGAAGCTGG AGGAAGTGCC CGCCTATAAG GAAATTCTGC GCTTGTTCAT GTCAAAGGAG 
CTGATCAACT TCGACACATT TAATGCAGAC TTTGGGCTCG TGTTGGCTGA AAACGAGATG 
TTCAAGGATA GCACCAAGCA TGGCAAGAAA TGTATCACCG AGCTTAAGGA TCGTCTGATA 
GAGCATAACA TTCGCATCAT TGCCATGTAT TACTCCCGCC TGCATTTGGC GCGCATGAGT 
GAGCTGCTGA ACCTGCCCAC CAGCCGCTGC GAGGAGTATC TTTCTAAACT GGCCAACACC 
GACACCATCC GCGTAAAGAT CGACCGTCCC GCCGGCATCA TTTACTTCAC CCAAAAAAAG 
AGCGCCTCCG ACATCCTGAA CAACTGGGCC ACCGACGTCA ACCAGCTGAT GTCCCTGGTC 
AACAAGACCT GCCACTTGAT TAACAAGGAA GAGTGCGTCT ACTCCGTCAT GTGTGCTGTC 
GAGGATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Rpn5 cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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