BRAFLDRAFT_84865 cDNA ORF clone, Branchiostoma floridae(Florida lancelet)

Gene
Clones
gRNAs

Summary

Gene Symbol	BRAFLDRAFT_84865
Entrez Gene ID	7234592
Full Name	hypothetical protein
Gene Type	protein-coding
Organism	Branchiostoma floridae(Florida lancelet)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002609003.1	XP_002609049.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The amphioxus genome and the evolution of the chordate karyotype.
Putnam NH, Butts T, Ferrier DE, Furlong RF, Hellsten U, Kawashima T, Robinson-Rechavi M, Shoguchi E, Terry A, Yu JK, Benito-Gutiérrez EL, Dubchak I, Garcia-Fernàndez J, Gibson-Brown JJ, Grigoriev IV, Horton AC, de Jong PJ, Jurka J, Kapitonov VV, Kohara Y, Kuroki Y, Lindquist E, Lucas S, Osoegawa K, Pennacchio LA, Salamov AA, Satou Y, Sauka-Spengler T, Schmutz J, Shin-I T, Toyoda A, Bronner-Fraser M, Fujiyama A, Holland LZ, Holland PW, Satoh N, Rokhsar DS
Nature453(7198)1064-71(2008 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following BRAFLDRAFT_84865 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BRAFLDRAFT_84865 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBb12990	XM_002609003.1 Latest version!	Branchiostoma floridae hypothetical protein, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

BRAFLDRAFT_84865 ( XM_002609003.1 ) cDNA ORF clone, Branchiostoma floridae(Florida lancelet) -> XP_002609049.1 Branchiostoma floridae hypothetical protein, mRNA.

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CloneID	OBb12990
Clone ID Related Accession (Same CDS sequence)	XM_002609003.1
Accession Version	XM_002609003.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3315bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1254844800000
Organism	Branchiostoma floridae(Florida lancelet)
Product	hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_003101537). COMPLETENESS: incomplete on both ends.

ATGACCGTCT CCCAGCTGTG CCTAAACGGC CCAACGATGA AGGACCTCCC GACCTACCGA 
CAAGATGATG TTTTTCTTCC TCTCCACTCT GCAAGAACAT CGCCGTGGTC CATCTGTGCT 
TGTCTGCTGA CATTGCTGCC TGAGCGAGTA GAAGAGCGGG TGCAGACTTT CGCCATGAGG 
TGGTTCTTAT CTCTTCTCCT TGGTCTCGAG CTGTTCACGG GAACAAGATC CGAGGGCAGG 
GCGAAGGATC TGTTCCTGTA CGGGATGTTC GACCAGGGAA ACTCCCCGGT CACCGCCCGG 
AAGGACCCGG CCTACCAGGG ACTGCTCCCT GCTTGTGAAA TGGCGATAGA GCAAATAAAC 
AACCGTTCGG ACATCTTGCC CGGCTACAAT CTCAAGATCC CAGATGACAT GATCATGGGT 
GGTCGTGCCG TTGCCGTGTA CCACCTCATC ATGAAGCTGT TCCATGAGCC CACGATGATC 
ATGATTCTGG GCCCGGGTGG CGCGGTGGTG GACCTCATCG CGGAGACTGC GCCTATCTTC 
AACCTTATCC AGCTCACGTT CTCGACGTAC TCGCCGGCTC TGTCGGACAG GCAGACTTAC 
CCTTTCCTGT TCAAAACTAT CCAGACTGAC AATGTGCACA ACCCGGCCAG AATCGCGCTG 
CTGCAGCATT TCGGCTGGGA CAAGGTTGCC ACCATTCAGG ACACCGATGA TCGATTTACA 
ACGATAGCGT CCAATTTGAA TGAGTTGCTG GGAGAGGCGA ACATCACCGT CCAATCTTCG 
GGAGGTTTCG GCAAAGATGT GACATCACAA CTCAGCCAGC TGGAGAACCT CAAGGCTGTA 
GACGCTAGGA TCGTGATTGC CCTGATGGCC CCACACCAGT GCCGGAAGCT ACTCTGCTGG 
GCTTATAATA ACGGGATGTA TGGTTCTCGG TACCTGTGGA TATTCAATGG TGCCCTAAGG 
GAGAACTGGT GGAAGCCACG GAAGTCTGAC ACCCTGGACT GTACAGCAGA GGAGATAGAC 
CAGGTCATGG AGTACAGCAT ATCCACAGAG CCGTCATTCT TCGCAGATGA GGGCGAACAG 
GGCATAGCCG GATATTCGTC TCCAAACGAC TACTGGGAAG CACACGTGGA CTACGCCAGG 
TTGAAGTACG GCGCGCCGGA AGCCAAATCC ACAGTCTATG TACCCCTGGC GTTTGATGCT 
GTTTACGCCG CGGCGCTGGC TCTGAACGCG TCAGCCGCTG AGCTTCCGGC CGGGAGGGGG 
CTGGAGGACT GGTCCTACGA AGACAGCAGC ATGAGGAGCG TGTTCTTTCG CAACATGGAG 
AAGACGAACT TCTTGGGAGT GTCGGGTCCG GTCCGCTTTG ACAAAACTGG TGACCGCTTG 
GGCCGTATCA TCATTAAGCA GATCCAAGAC GGCAAAGCTG TAGAGGTTGG AAAGTTTCAC 
GCTTACGAGA AGAAGATAAT ATGGAGCGAC ACAACCCCTC CCAAGTGGAA AGGTGGCCAG 
CCCCCTGTAG ACGAGGTACG GAAGATTACC CGTGAGATCC GCGTGTCAGA CGGCCTGTTG 
TACACCATGG TCAGCCTGGC AGGCCTGGGG ATGATCTTCT GCCTGCTGTT CTTGGCCTTC 
AACTTCAAAT TTAGGGAAAA AAGAGTGATC AAGATGTCCT CCCCGCGCCT GAACAATGCG 
CTCATCCTGG GGTGCATATT TGCATACCTC GCCATCATCC TGTTCGGACT CACAGAGAAT 
GTGGCAGAGT CCAATCAAGC GTTCTACATG TGTAAGGCTC GGGTGTGGAT CATGGTGGTG 
GGGTTTACTC TGGCGTTTGG CAGCATGTTC AGCAAAACAT GGCGTGTCTA CGCTCTCTTC 
CGACACACCA AGGTGGAGAA AAAGGTGATC AAAGACTTCC ACCTGTTCGC GATGGTCGGG 
AGTTTCCTGC TGATGGACGT GGTTTTCCTG ATGCTGTGGG AGGTTCTGGA CCCCATCACC 
ATGCAGCGAG AGAAATTTCC AGAAGAGGAA GATCCCAACC GCAACGACGT CCTGTACCTC 
CCGGAGCTAA GGCGATGTAC CTCTGACTAC CTGATGTACT GGCTCGGAAT CATCTACGCA 
TCAAAAGGAA TCCTGATCTT GTTCGGCATC TTCCTGGCCT GGGAGACGCG GAAGGTCCAG 
ATCCCCGAGC TGAACGACTC CAAGCAGATC GGCCTGTGCG TGTACAACGT GATGATCATG 
TCAGCTGTCG GGGTTCCCAT CATCAACCTG CTGGACTCCC AGCAGCTGGA CATCAGCTTC 
GCCGTGCTGT CAGTCTGCAT CATTGTCTGT ACCTCTACCA CTCTGGCGCT GGTCTTCGTC 
CCAAAGATTT GGCAAGGTCT GAGACATGGC TTCGAGATTC AGAGATCGGG CAAGTTTCTG 
ACGAGAAAGG GGAGTTCCGG GACTGTCACC AACGGCTGTG ATGATCACAT CAGCTGCAAG 
AAGGAGATCA TCTTGCTCAA AAACCAGATC AACGTTCTCA ACGTAGAAAG AAATCATGGA 
GATCAGGAAA AGAAAAGGAA GCAAGGGGGA CAGAAACGGC CCGTCGCTGA GTCAGGCTAT 
CGTGATCTCC GCAGACAGAC TGAAGATCCC AACCGCAACG ACGTCCTGTA CCTCCCGGAG 
CTAAGGCGAT GTACCTCTGA CTACCTGATG TACTGGCTCG GAATCATCTA CGCATCAAAA 
GGAATCCTGA TCTTGTTCGG CATCTTCCTG GCCTGGGAGA CGCGGAAGGT CCAGATCCCC 
GAGCTGAACG ACTCCAAGCA GATCGGCCTG TGCGTGTACA ACGTGATGAT CATGTCAGCT 
GTCGGGGTTC CCATCATCAA CCTGCTGGAC TCCCAGCAGC TGGACATCAG CTTCGCCGTG 
CTGTCAGTCT GCATCATTGT CTGTACCTCT ACCACTCTGG CGCTGGTCTT CGTCCCAAAG 
ATTTGGCAAG GTCTGAGACA TGGCTTCGAG ATTCAGAGAT CGGGCAAGTT TCTGACGAGA 
AAGGGGAGTT CCGGGACTGT CACCAACGGC TGTGATGATC ACATCAGCTG CAAGAAGGAG 
ATCATCTTGC TCAAAAACCA GATCAACGTT CTCAACAAAG AAATCATGGA GATCAGGAAA 
AGAAAAGGAA GCAAGGGGGA CAGAAACGGC CCGTCGCTGA GTCAGGCTGT CGTGATCTCC 
GCAGACAGAC TGTCCGTGAA CGGTTCAACC TCAACCTCAA ACACCAAGTC TACAGCAGGG 
AGTACCAAAT CACTCCCATT GAAGGACATG AACAATGACA TAGAAATGCA GGTCATCAAA 
GAAACGTCGG CCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002609049.1
CDS	1..3315
Translation	MTVSQLCLNGPTMKDLPTYRQDDVFLPLHSARTSPWSICACLLTLLPERVEERVQTFAMRWFLSLLLGLELFTGTRSEGRAKDLFLYGMFDQGNSPVTARKDPAYQGLLPACEMAIEQINNRSDILPGYNLKIPDDMIMGGRAVAVYHLIMKLFHEPTMIMILGPGGAVVDLIAETAPIFNLIQLTFSTYSPALSDRQTYPFLFKTIQTDNVHNPARIALLQHFGWDKVATIQDTDDRFTTIASNLNELLGEANITVQSSGGFGKDVTSQLSQLENLKAVDARIVIALMAPHQCRKLLCWAYNNGMYGSRYLWIFNGALRENWWKPRKSDTLDCTAEEIDQVMEYSISTEPSFFADEGEQGIAGYSSPNDYWEAHVDYARLKYGAPEAKSTVYVPLAFDAVYAAALALNASAAELPAGRGLEDWSYEDSSMRSVFFRNMEKTNFLGVSGPVRFDKTGDRLGRIIIKQIQDGKAVEVGKFHAYEKKIIWSDTTPPKWKGGQPPVDEVRKITREIRVSDGLLYTMVSLAGLGMIFCLLFLAFNFKFREKRVIKMSSPRLNNALILGCIFAYLAIILFGLTENVAESNQAFYMCKARVWIMVVGFTLAFGSMFSKTWRVYALFRHTKVEKKVIKDFHLFAMVGSFLLMDVVFLMLWEVLDPITMQREKFPEEEDPNRNDVLYLPELRRCTSDYLMYWLGIIYASKGILILFGIFLAWETRKVQIPELNDSKQIGLCVYNVMIMSAVGVPIINLLDSQQLDISFAVLSVCIIVCTSTTLALVFVPKIWQGLRHGFEIQRSGKFLTRKGSSGTVTNGCDDHISCKKEIILLKNQINVLNVERNHGDQEKKRKQGGQKRPVAESGYRDLRRQTEDPNRNDVLYLPELRRCTSDYLMYWLGIIYASKGILILFGIFLAWETRKVQIPELNDSKQIGLCVYNVMIMSAVGVPIINLLDSQQLDISFAVLSVCIIVCTSTTLALVFVPKIWQGLRHGFEIQRSGKFLTRKGSSGTVTNGCDDHISCKKEIILLKNQINVLNKEIMEIRKRKGSKGDRNGPSLSQAVVISADRLSVNGSTSTSNTKSTAGSTKSLPLKDMNNDIEMQVIKETSA

Target ORF information:

RefSeq Version	XM_002609003.1
Organism	Branchiostoma floridae(Florida lancelet)
Definition	Branchiostoma floridae hypothetical protein, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002609003.1

ORF Insert Sequence:

ATGACCGTCT CCCAGCTGTG CCTAAACGGC CCAACGATGA AGGACCTCCC GACCTACCGA 
CAAGATGATG TTTTTCTTCC TCTCCACTCT GCAAGAACAT CGCCGTGGTC CATCTGTGCT 
TGTCTGCTGA CATTGCTGCC TGAGCGAGTA GAAGAGCGGG TGCAGACTTT CGCCATGAGG 
TGGTTCTTAT CTCTTCTCCT TGGTCTCGAG CTGTTCACGG GAACAAGATC CGAGGGCAGG 
GCGAAGGATC TGTTCCTGTA CGGGATGTTC GACCAGGGAA ACTCCCCGGT CACCGCCCGG 
AAGGACCCGG CCTACCAGGG ACTGCTCCCT GCTTGTGAAA TGGCGATAGA GCAAATAAAC 
AACCGTTCGG ACATCTTGCC CGGCTACAAT CTCAAGATCC CAGATGACAT GATCATGGGT 
GGTCGTGCCG TTGCCGTGTA CCACCTCATC ATGAAGCTGT TCCATGAGCC CACGATGATC 
ATGATTCTGG GCCCGGGTGG CGCGGTGGTG GACCTCATCG CGGAGACTGC GCCTATCTTC 
AACCTTATCC AGCTCACGTT CTCGACGTAC TCGCCGGCTC TGTCGGACAG GCAGACTTAC 
CCTTTCCTGT TCAAAACTAT CCAGACTGAC AATGTGCACA ACCCGGCCAG AATCGCGCTG 
CTGCAGCATT TCGGCTGGGA CAAGGTTGCC ACCATTCAGG ACACCGATGA TCGATTTACA 
ACGATAGCGT CCAATTTGAA TGAGTTGCTG GGAGAGGCGA ACATCACCGT CCAATCTTCG 
GGAGGTTTCG GCAAAGATGT GACATCACAA CTCAGCCAGC TGGAGAACCT CAAGGCTGTA 
GACGCTAGGA TCGTGATTGC CCTGATGGCC CCACACCAGT GCCGGAAGCT ACTCTGCTGG 
GCTTATAATA ACGGGATGTA TGGTTCTCGG TACCTGTGGA TATTCAATGG TGCCCTAAGG 
GAGAACTGGT GGAAGCCACG GAAGTCTGAC ACCCTGGACT GTACAGCAGA GGAGATAGAC 
CAGGTCATGG AGTACAGCAT ATCCACAGAG CCGTCATTCT TCGCAGATGA GGGCGAACAG 
GGCATAGCCG GATATTCGTC TCCAAACGAC TACTGGGAAG CACACGTGGA CTACGCCAGG 
TTGAAGTACG GCGCGCCGGA AGCCAAATCC ACAGTCTATG TACCCCTGGC GTTTGATGCT 
GTTTACGCCG CGGCGCTGGC TCTGAACGCG TCAGCCGCTG AGCTTCCGGC CGGGAGGGGG 
CTGGAGGACT GGTCCTACGA AGACAGCAGC ATGAGGAGCG TGTTCTTTCG CAACATGGAG 
AAGACGAACT TCTTGGGAGT GTCGGGTCCG GTCCGCTTTG ACAAAACTGG TGACCGCTTG 
GGCCGTATCA TCATTAAGCA GATCCAAGAC GGCAAAGCTG TAGAGGTTGG AAAGTTTCAC 
GCTTACGAGA AGAAGATAAT ATGGAGCGAC ACAACCCCTC CCAAGTGGAA AGGTGGCCAG 
CCCCCTGTAG ACGAGGTACG GAAGATTACC CGTGAGATCC GCGTGTCAGA CGGCCTGTTG 
TACACCATGG TCAGCCTGGC AGGCCTGGGG ATGATCTTCT GCCTGCTGTT CTTGGCCTTC 
AACTTCAAAT TTAGGGAAAA AAGAGTGATC AAGATGTCCT CCCCGCGCCT GAACAATGCG 
CTCATCCTGG GGTGCATATT TGCATACCTC GCCATCATCC TGTTCGGACT CACAGAGAAT 
GTGGCAGAGT CCAATCAAGC GTTCTACATG TGTAAGGCTC GGGTGTGGAT CATGGTGGTG 
GGGTTTACTC TGGCGTTTGG CAGCATGTTC AGCAAAACAT GGCGTGTCTA CGCTCTCTTC 
CGACACACCA AGGTGGAGAA AAAGGTGATC AAAGACTTCC ACCTGTTCGC GATGGTCGGG 
AGTTTCCTGC TGATGGACGT GGTTTTCCTG ATGCTGTGGG AGGTTCTGGA CCCCATCACC 
ATGCAGCGAG AGAAATTTCC AGAAGAGGAA GATCCCAACC GCAACGACGT CCTGTACCTC 
CCGGAGCTAA GGCGATGTAC CTCTGACTAC CTGATGTACT GGCTCGGAAT CATCTACGCA 
TCAAAAGGAA TCCTGATCTT GTTCGGCATC TTCCTGGCCT GGGAGACGCG GAAGGTCCAG 
ATCCCCGAGC TGAACGACTC CAAGCAGATC GGCCTGTGCG TGTACAACGT GATGATCATG 
TCAGCTGTCG GGGTTCCCAT CATCAACCTG CTGGACTCCC AGCAGCTGGA CATCAGCTTC 
GCCGTGCTGT CAGTCTGCAT CATTGTCTGT ACCTCTACCA CTCTGGCGCT GGTCTTCGTC 
CCAAAGATTT GGCAAGGTCT GAGACATGGC TTCGAGATTC AGAGATCGGG CAAGTTTCTG 
ACGAGAAAGG GGAGTTCCGG GACTGTCACC AACGGCTGTG ATGATCACAT CAGCTGCAAG 
AAGGAGATCA TCTTGCTCAA AAACCAGATC AACGTTCTCA ACGTAGAAAG AAATCATGGA 
GATCAGGAAA AGAAAAGGAA GCAAGGGGGA CAGAAACGGC CCGTCGCTGA GTCAGGCTAT 
CGTGATCTCC GCAGACAGAC TGAAGATCCC AACCGCAACG ACGTCCTGTA CCTCCCGGAG 
CTAAGGCGAT GTACCTCTGA CTACCTGATG TACTGGCTCG GAATCATCTA CGCATCAAAA 
GGAATCCTGA TCTTGTTCGG CATCTTCCTG GCCTGGGAGA CGCGGAAGGT CCAGATCCCC 
GAGCTGAACG ACTCCAAGCA GATCGGCCTG TGCGTGTACA ACGTGATGAT CATGTCAGCT 
GTCGGGGTTC CCATCATCAA CCTGCTGGAC TCCCAGCAGC TGGACATCAG CTTCGCCGTG 
CTGTCAGTCT GCATCATTGT CTGTACCTCT ACCACTCTGG CGCTGGTCTT CGTCCCAAAG 
ATTTGGCAAG GTCTGAGACA TGGCTTCGAG ATTCAGAGAT CGGGCAAGTT TCTGACGAGA 
AAGGGGAGTT CCGGGACTGT CACCAACGGC TGTGATGATC ACATCAGCTG CAAGAAGGAG 
ATCATCTTGC TCAAAAACCA GATCAACGTT CTCAACAAAG AAATCATGGA GATCAGGAAA 
AGAAAAGGAA GCAAGGGGGA CAGAAACGGC CCGTCGCTGA GTCAGGCTGT CGTGATCTCC 
GCAGACAGAC TGTCCGTGAA CGGTTCAACC TCAACCTCAA ACACCAAGTC TACAGCAGGG 
AGTACCAAAT CACTCCCATT GAAGGACATG AACAATGACA TAGAAATGCA GGTCATCAAA 
GAAACGTCGG CCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The amphioxus genome and the evolution of the chordate karyotype.
Nature453(7198)1064-71(2008 Jun)
Putnam NH,Butts T,Ferrier DE,Furlong RF,Hellsten U,Kawashima T,Robinson-Rechavi M,Shoguchi E,Terry A,Yu JK,Benito-Gutiérrez EL,Dubchak I,Garcia-Fernàndez J,Gibson-Brown JJ,Grigoriev IV,Horton AC,de Jong PJ,Jurka J,Kapitonov VV,Kohara Y,Kuroki Y,Lindquist E,Lucas S,Osoegawa K,Pennacchio LA,Salamov AA,Satou Y,Sauka-Spengler T,Schmutz J,Shin-I T,Toyoda A,Bronner-Fraser M,Fujiyama A,Holland LZ,Holland PW,Satoh N,Rokhsar DS

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BRAFLDRAFT_84865 cDNA ORF clone, Branchiostoma floridae(Florida lancelet)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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