Gene Symbol | RTN1 |
Entrez Gene ID | 100152394 |
Full Name | reticulon 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » RTN1 cDNA ORF clone
Gene Symbol | RTN1 |
Entrez Gene ID | 100152394 |
Full Name | reticulon 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001244640.1 | NP_001231569.1 | reticulon-1 isoform 1 |
XM_013985887.1 | XP_013841341.1 | reticulon-1 isoform X1 |
NM_001244641.1 | NP_001231570.1 | reticulon-1 isoform 2 |
A reticular rhapsody: phylogenic evolution and nomenclature of the RTN/Nogo gene family.
Oertle T, Klinger M, Stuermer CA, Schwab ME
FASEB journal : official publication of the Federation of American Societies for Experimental Biology17(10)1238-47(2003 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following RTN1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RTN1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe00886 | |
Clone ID Related Accession (Same CDS sequence) | NM_001244641.1 | |
Accession Version | NM_001244641.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 627bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1497369600000 | |
Organism | Sus scrofa(pig) | |
Product | reticulon-1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AEMK02000004.1. On or before Jul 10, 2014 this sequence version replaced XM_003480479.1, XM_003480480.1. Transcript Variant: This variant (2) differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting protein (isoform 2) contains a distinct N-terminus and is shorter than isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5275318.175067.1, SRR5275318.14747.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA103886122, SAMEA103886142 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCAGGCCA CTGCCGATTC CACCAAGATG GACTGTGTGT GGAGCAACTG GAAAAGTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001231570.1 |
CDS | 114..740 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCAGGCCA CTGCCGATTC CACCAAGATG GACTGTGTGT GGAGCAACTG GAAAAGTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe00841 | |
Clone ID Related Accession (Same CDS sequence) | NM_001244640.1 | |
Accession Version | NM_001244640.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2313bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1445011200000 | |
Organism | Sus scrofa(pig) | |
Product | reticulon-1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU469078.2 and FP340567.2. On or before Sep 24, 2011 this sequence version replaced XM_003353496.1, XM_003121842.2. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN02584789 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCCGCGC CGCCCGATTC CCAAGACGAG TTGCTGCCTC TGACCAGCCC CGGGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001231569.1 |
CDS | 1..2313 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCCGCGC CGCCCGATTC CCAAGACGAG TTGCTGCCTC TGACCAGCCC CGGGTCCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe31506 | |
Clone ID Related Accession (Same CDS sequence) | XM_013985887.1 | |
Accession Version | XM_013985887.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2070bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | reticulon-1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003534082.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGATG TCTCCAGGGC CACGGATCAT ACCTTTGCAA CAGCAGCAAG AGATGGGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013841341.1 |
CDS | 39..2108 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCAGATG TCTCCAGGGC CACGGATCAT ACCTTTGCAA CAGCAGCAAG AGATGGGGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A reticular rhapsody: phylogenic evolution and nomenclature of the RTN/Nogo gene family. |