LINJ_36_4420 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_36_4420
Entrez Gene ID	5074134
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001469984.1	XP_001470021.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_36_4420 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_36_4420 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07319	XM_001469984.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_36_4420 ( XM_001469984.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001470021.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc07319
Clone ID Related Accession (Same CDS sequence)	XM_001469984.1
Accession Version	XM_001469984.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2955bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009420). COMPLETENESS: incomplete on both ends.

ATGGAGTCCT TTGATCCGTT TCGGGTGGTG GGCTCCATCT GCGGACCTGT CCCGGTGTGC 
CCCACACTGC TCTACGGCAC GCCGGTGCTG ATGGTGGCCA CTGGCCGCAC CTTTCAGCTC 
TACAAGGGCA AGGAGCTGGC AATGATGCGC GGCGGTCCGA CGTTTCAGGA CACGGTTCGT 
GCGGTAGCAC AAGCTGGTAA GTACCGCGCC GTCGCGGAGG GGCCGCGCCT GCACGTCTAC 
GTGCACCACA AGCCCCTCTG GTCGAGCCAC CATGAAGCCG CCACGAAGCC GAGCATCACA 
CTCCTACTGG CCCAGGATGA CCTCCTGTTC AGCGTTGGCG ACGACAAGCG CATTGTGGTG 
TGGGAGCTCA AGACGGGCAC AGTGCTGCAG GCGATGTTGG TGGAGAACAC TGAGACGGTC 
ACGTGCCTTG CACTGCTGAC GGGGTACACG AACAAGATGC TTCTCGCGAC GGCAGAGGGA 
ACGTTGCAGC TCTGGAACTT CCGTTCTGGC GCCTGCCTGT GGTACTCCAT GCGTAGCAGC 
GGTAGCAGTT CCGTGCAGGC GTCACGTGCC ACCGCCGGCG GTGCCGCCGC CATCACGGCA 
CTCGCTTGCA GCAGGTACAA GGACATCATC GCCTACGGCA CAACGGAGGG GAAGGTTGTT 
GCGTGCAACG TGGCAACGGA CGAGGTGATC ACCACCTTCG ACCATAGCGA GAGCTGTGCT 
GTTACGTCGC TGCTGTTTCG CACGGACAAA GACGGCCTGC TTGTGTCCGG CACGAGCCGT 
GGCGAGGTGG TCATCTGGGA CCTCGAAAAT CGATGCATGG ACGGCACCTT GACCCGGTCC 
AAGCAAGTGC GCTCGGAGCT GGAGGCACTG GAGCGTCCTC ACGTCGACGT CGTGCACTCG 
CTCGTCATGT TTGACTTGCC GGAGTACACG TCGTTGCTCA TCACAGGTAG CGCCGACAAC 
GCCCTCATGC AGTTCCGCTT TGACACCGTG GACGGCCTTG GCGTATTGGT GCGGGAGCGC 
CGTGGACACA TGGGAAGCTG CACCAACGCC ATCTTCTACA ACACCGACCT TCTCGTTACG 
GCTGGCAACG ACCGTGCCTT GCGCGTCACG CACGTCTTCT CCGACCGCGC ATCATGGGAG 
CTGTCGCAGG GCAAGCTGGG CAAGCGCGGA CGCGAGAAGA ACTTGGGGCG GGAGGCCGTG 
AAGCTGCCCC CTGCCACCGC GCTTGCCGCC GCGACCACGC GCAACTACCA GTGGTCGAGT 
CTTGTGTCGC TACACGCCGC GTCGGCGCTG GCGTGCGGCT GGCGAATGGA CACACGCGCG 
ATGGAGTTCA AGCTATCCGG CATTCAGACC TCCGCCCACA CCGCCCGCGC TCTGGCGCTG 
TCGGACTGCG GCAACTACGC CGTCGTCGGA TACTCCAGTG GAAACGTCGC TGTTTTGAGC 
CTGCAGAACC GCAGTGTGCG TCACCTCTTC GACGCCGATC TCGGTGCCGA TCGAGCCCAT 
GACAGCTCGG TGGAGTGCGT CGAAGTGGCG TGCGGCAACA CCGTGGTCGT GACGGCCGGG 
CTGGACGGCG TGATCAAGAT GTGGGATCTG TGGACTGGCA AGCTGAAGGC AGCCATCCCT 
ACCGGCCAGC CGATGACCAA GTCGTGCATG CACGAGGCAT CATCGCTCTT CATTGTTGCG 
CAGCATTTCA CCATTCGCGT CTACCATGCC AATCCCGACG TCGGTCTCAC GGAGGAGGAG 
CTGCGCACTC CAGTTCGCGA GCTGGAGGGC CACAACAGCC CTATTACGGC GCTCGCGCTC 
GCGCCTGACA CGTACCGCTA CGTAGCGTCG ACCTCCGGTG ATGGTGCACT GCTCGTCTGG 
GACTTGGCCG CCGCCGCCTG CGTCGGGCAG TATCGCTTCG CATCGCCTGC TTTGTCCCTC 
AGCTTTCATC CCGATGCGCT CTTCCTTGTC ACCACGCACG CCGGTGAGCG CGGCGCGTAT 
CTGTGGGTCA ACAACATCCG CTACGGGTAC GTGCCGGAGG TGGTCCTGAG TCCAAAGGTG 
AACGCGGTAG AGACGCTGCC GTGGCTACAC TTCCCCACTG CGCACGGGGC AGCTGAGGGG 
ACTGCCGAGG AAAGCACAAA CGGCAGTGTG CCGCGCACGT CGGCAGCCGC AGCGCTCACG 
GAGGCGGAGG AAGAGGAACG CGCGGCCGCC GAAGCGGAGG CGCGGGAGGC GGCAGTCGCA 
GAGGCAAATC TGTTTGATGC ATCGCAGGAC ATTGCCCTGG CGCGTCGGCG ACAGACGGAG 
GCACAGCAAG CGGCGCTCGA CGCGATCATG ACAGAAGGGA TGCAGCTAGC TGGAGTGCCG 
CAGCGCCTGT GGTTCAACCT CACCGTGCTG GACCAAATCA AGGAGAAGAA CCAACCCCTG 
CTCCCGCCCA AGAAGAAGGA TGTGCCGTTC TTTCTGCCCA CCACGCAAGA GCTGCGGCCA 
ACGTTTCTTG TCATGGTATC CGACAACCGC AAGAACGATA CCGGGAACGC GAAGGGGCGA 
CTGATGCACG CCGACATGGA GGAGCTGACG CCGGTGCAGG AGATGCTTGT GAAGGAGAAG 
CACGACGCTC TCATGGACTA CTTTTTGTCT CTCAAGACCG CGCAAGCAAT CGACCTGGAG 
CTGAAGCGCG CGGTGGATTA TGTGAACGGC AGCAGCTACA CAGCCGCTGA GCTGGCGAGG 
ATGCAAGCGT GCGTGAAGGG CCTGCTGTCC TTCATCACGG TGTGGCTGCG GCGAAACAAG 
AACGTCGACT TTGTGCAGGG ACTCCTTGCG GACGTGGTTC GCTCTCACGG GGCACTGCTG 
ACCCGCTTCG GCGACGCGCT TGTGCCGGCG CTGGAGGAGT TGGCAGAGGT GCAGAACACG 
CTGCGCCACT CGGTAGATCA CCTGGTGTCG TACCCGACCT GCCTCGCGGG CACCTTCTCT 
GGCTCTATCT TCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001470021.1
CDS	1..2955
Translation	MESFDPFRVVGSICGPVPVCPTLLYGTPVLMVATGRTFQLYKGKELAMMRGGPTFQDTVRAVAQAGKYRAVAEGPRLHVYVHHKPLWSSHHEAATKPSITLLLAQDDLLFSVGDDKRIVVWELKTGTVLQAMLVENTETVTCLALLTGYTNKMLLATAEGTLQLWNFRSGACLWYSMRSSGSSSVQASRATAGGAAAITALACSRYKDIIAYGTTEGKVVACNVATDEVITTFDHSESCAVTSLLFRTDKDGLLVSGTSRGEVVIWDLENRCMDGTLTRSKQVRSELEALERPHVDVVHSLVMFDLPEYTSLLITGSADNALMQFRFDTVDGLGVLVRERRGHMGSCTNAIFYNTDLLVTAGNDRALRVTHVFSDRASWELSQGKLGKRGREKNLGREAVKLPPATALAAATTRNYQWSSLVSLHAASALACGWRMDTRAMEFKLSGIQTSAHTARALALSDCGNYAVVGYSSGNVAVLSLQNRSVRHLFDADLGADRAHDSSVECVEVACGNTVVVTAGLDGVIKMWDLWTGKLKAAIPTGQPMTKSCMHEASSLFIVAQHFTIRVYHANPDVGLTEEELRTPVRELEGHNSPITALALAPDTYRYVASTSGDGALLVWDLAAAACVGQYRFASPALSLSFHPDALFLVTTHAGERGAYLWVNNIRYGYVPEVVLSPKVNAVETLPWLHFPTAHGAAEGTAEESTNGSVPRTSAAAALTEAEEEERAAAEAEAREAAVAEANLFDASQDIALARRRQTEAQQAALDAIMTEGMQLAGVPQRLWFNLTVLDQIKEKNQPLLPPKKKDVPFFLPTTQELRPTFLVMVSDNRKNDTGNAKGRLMHADMEELTPVQEMLVKEKHDALMDYFLSLKTAQAIDLELKRAVDYVNGSSYTAAELARMQACVKGLLSFITVWLRRNKNVDFVQGLLADVVRSHGALLTRFGDALVPALEELAEVQNTLRHSVDHLVSYPTCLAGTFSGSIF

Target ORF information:

RefSeq Version	XM_001469984.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001469984.1

ORF Insert Sequence:

ATGGAGTCCT TTGATCCGTT TCGGGTGGTG GGCTCCATCT GCGGACCTGT CCCGGTGTGC 
CCCACACTGC TCTACGGCAC GCCGGTGCTG ATGGTGGCCA CTGGCCGCAC CTTTCAGCTC 
TACAAGGGCA AGGAGCTGGC AATGATGCGC GGCGGTCCGA CGTTTCAGGA CACGGTTCGT 
GCGGTAGCAC AAGCTGGTAA GTACCGCGCC GTCGCGGAGG GGCCGCGCCT GCACGTCTAC 
GTGCACCACA AGCCCCTCTG GTCGAGCCAC CATGAAGCCG CCACGAAGCC GAGCATCACA 
CTCCTACTGG CCCAGGATGA CCTCCTGTTC AGCGTTGGCG ACGACAAGCG CATTGTGGTG 
TGGGAGCTCA AGACGGGCAC AGTGCTGCAG GCGATGTTGG TGGAGAACAC TGAGACGGTC 
ACGTGCCTTG CACTGCTGAC GGGGTACACG AACAAGATGC TTCTCGCGAC GGCAGAGGGA 
ACGTTGCAGC TCTGGAACTT CCGTTCTGGC GCCTGCCTGT GGTACTCCAT GCGTAGCAGC 
GGTAGCAGTT CCGTGCAGGC GTCACGTGCC ACCGCCGGCG GTGCCGCCGC CATCACGGCA 
CTCGCTTGCA GCAGGTACAA GGACATCATC GCCTACGGCA CAACGGAGGG GAAGGTTGTT 
GCGTGCAACG TGGCAACGGA CGAGGTGATC ACCACCTTCG ACCATAGCGA GAGCTGTGCT 
GTTACGTCGC TGCTGTTTCG CACGGACAAA GACGGCCTGC TTGTGTCCGG CACGAGCCGT 
GGCGAGGTGG TCATCTGGGA CCTCGAAAAT CGATGCATGG ACGGCACCTT GACCCGGTCC 
AAGCAAGTGC GCTCGGAGCT GGAGGCACTG GAGCGTCCTC ACGTCGACGT CGTGCACTCG 
CTCGTCATGT TTGACTTGCC GGAGTACACG TCGTTGCTCA TCACAGGTAG CGCCGACAAC 
GCCCTCATGC AGTTCCGCTT TGACACCGTG GACGGCCTTG GCGTATTGGT GCGGGAGCGC 
CGTGGACACA TGGGAAGCTG CACCAACGCC ATCTTCTACA ACACCGACCT TCTCGTTACG 
GCTGGCAACG ACCGTGCCTT GCGCGTCACG CACGTCTTCT CCGACCGCGC ATCATGGGAG 
CTGTCGCAGG GCAAGCTGGG CAAGCGCGGA CGCGAGAAGA ACTTGGGGCG GGAGGCCGTG 
AAGCTGCCCC CTGCCACCGC GCTTGCCGCC GCGACCACGC GCAACTACCA GTGGTCGAGT 
CTTGTGTCGC TACACGCCGC GTCGGCGCTG GCGTGCGGCT GGCGAATGGA CACACGCGCG 
ATGGAGTTCA AGCTATCCGG CATTCAGACC TCCGCCCACA CCGCCCGCGC TCTGGCGCTG 
TCGGACTGCG GCAACTACGC CGTCGTCGGA TACTCCAGTG GAAACGTCGC TGTTTTGAGC 
CTGCAGAACC GCAGTGTGCG TCACCTCTTC GACGCCGATC TCGGTGCCGA TCGAGCCCAT 
GACAGCTCGG TGGAGTGCGT CGAAGTGGCG TGCGGCAACA CCGTGGTCGT GACGGCCGGG 
CTGGACGGCG TGATCAAGAT GTGGGATCTG TGGACTGGCA AGCTGAAGGC AGCCATCCCT 
ACCGGCCAGC CGATGACCAA GTCGTGCATG CACGAGGCAT CATCGCTCTT CATTGTTGCG 
CAGCATTTCA CCATTCGCGT CTACCATGCC AATCCCGACG TCGGTCTCAC GGAGGAGGAG 
CTGCGCACTC CAGTTCGCGA GCTGGAGGGC CACAACAGCC CTATTACGGC GCTCGCGCTC 
GCGCCTGACA CGTACCGCTA CGTAGCGTCG ACCTCCGGTG ATGGTGCACT GCTCGTCTGG 
GACTTGGCCG CCGCCGCCTG CGTCGGGCAG TATCGCTTCG CATCGCCTGC TTTGTCCCTC 
AGCTTTCATC CCGATGCGCT CTTCCTTGTC ACCACGCACG CCGGTGAGCG CGGCGCGTAT 
CTGTGGGTCA ACAACATCCG CTACGGGTAC GTGCCGGAGG TGGTCCTGAG TCCAAAGGTG 
AACGCGGTAG AGACGCTGCC GTGGCTACAC TTCCCCACTG CGCACGGGGC AGCTGAGGGG 
ACTGCCGAGG AAAGCACAAA CGGCAGTGTG CCGCGCACGT CGGCAGCCGC AGCGCTCACG 
GAGGCGGAGG AAGAGGAACG CGCGGCCGCC GAAGCGGAGG CGCGGGAGGC GGCAGTCGCA 
GAGGCAAATC TGTTTGATGC ATCGCAGGAC ATTGCCCTGG CGCGTCGGCG ACAGACGGAG 
GCACAGCAAG CGGCGCTCGA CGCGATCATG ACAGAAGGGA TGCAGCTAGC TGGAGTGCCG 
CAGCGCCTGT GGTTCAACCT CACCGTGCTG GACCAAATCA AGGAGAAGAA CCAACCCCTG 
CTCCCGCCCA AGAAGAAGGA TGTGCCGTTC TTTCTGCCCA CCACGCAAGA GCTGCGGCCA 
ACGTTTCTTG TCATGGTATC CGACAACCGC AAGAACGATA CCGGGAACGC GAAGGGGCGA 
CTGATGCACG CCGACATGGA GGAGCTGACG CCGGTGCAGG AGATGCTTGT GAAGGAGAAG 
CACGACGCTC TCATGGACTA CTTTTTGTCT CTCAAGACCG CGCAAGCAAT CGACCTGGAG 
CTGAAGCGCG CGGTGGATTA TGTGAACGGC AGCAGCTACA CAGCCGCTGA GCTGGCGAGG 
ATGCAAGCGT GCGTGAAGGG CCTGCTGTCC TTCATCACGG TGTGGCTGCG GCGAAACAAG 
AACGTCGACT TTGTGCAGGG ACTCCTTGCG GACGTGGTTC GCTCTCACGG GGCACTGCTG 
ACCCGCTTCG GCGACGCGCT TGTGCCGGCG CTGGAGGAGT TGGCAGAGGT GCAGAACACG 
CTGCGCCACT CGGTAGATCA CCTGGTGTCG TACCCGACCT GCCTCGCGGG CACCTTCTCT 
GGCTCTATCT TCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_36_4420 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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