LINJ_26_1320 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_26_1320
Entrez Gene ID	5069846
Full Name	putative DNA ligase k alpha
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001470437.1	XP_001470474.1	putative DNA ligase k alpha

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_26_1320 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_26_1320 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc03463	XM_001470437.1 Latest version!	Leishmania infantum JPCM5 putative DNA ligase k alpha partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_26_1320 ( XM_001470437.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001470474.1 Leishmania infantum JPCM5 putative DNA ligase k alpha partial mRNA.

Price & Availability↑

CloneID	OLc03463
Clone ID Related Accession (Same CDS sequence)	XM_001470437.1
Accession Version	XM_001470437.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1893bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	putative DNA ligase k alpha
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009410). COMPLETENESS: incomplete on both ends.

ATGAAGGCGA CTGTGTTGCG ACGGCCGGGC GGCAGCGGCT TAGTCGGGTA TCCGACGCTT 
CTGCGGCTGC GGGCGGTGAA GCGGGTGGCA ACGGCAAAGG TGAAAGGCAC GGCGAGGAGC 
GGCAGGGCCA AAGAAGCGGC TGCGCCGACA GCGGGCAGCG GTCATGGCTC ACACAAACTG 
TCCTTGGCGG AGTTTCACCC TGCCATCGCC CGCACATGGA TCGCGGCGGC GTCGAACAAG 
ATGCTGCAGC CGCAGCACGT CGCCCCTGAT AGCCGCAAAC TGGCGTGGTG GATTTGCCCG 
TCTTGCCACC ATCAGCACAA CAAGCGCATA GATCTTCACC TCGCCGCCGG GGGCGCGTGC 
CCCAAGTGTG AAGCAAAACC CACCTTGGCT GGCGGCGCGT CCGTGAAGAA GAGTGCGTCG 
AGTTCCCGTG GCGCCAGCAA TCCCGCCTCG CCGTTGAGGA AGAAGCAGGC ATCCGCTGCG 
TCAGCGCATG AGCCTGTCCC TGCCGCAGCA GCACTTCGCC ATCGCTGCCG CCCCAACTCG 
ACACTCGACA CCATCGCCGC CCGGAACGCG AACCTCCTCA GCAAGAGCGT AGCCGACAAT 
CAGTACCTTC GCGTGCAGGA GACGCGCAAT CTGCTTCCGA TGCTGGCAAA GAGCTACGAT 
AAGGAACGTT GGAAAATCGC GCCTGCTGAG GTGCTGCAGG TGTCGCCGAA GCTGGACGGT 
ATCCGCTGCG TCGCCGCGTA CCGAATAGAC ACGAAGCAGG TGCTCTTCTT CAGCCGCTCC 
GGCACGCTCT TCGAGTGCTG TGATGACGCC ATCGAGCCAG CGCTGCGGTA CCTCTTCGAG 
AAGGACCCGA CACTCGTTCT TGACGGCGAG CTGTACAACG ACTCGATCAA CCTAGCGCAG 
CTTAGCACTG CGTGTAAAAC AGCAGGAAAA ACAACCCCGC CGCCCCCCAC GGCGGCATTG 
GCTGAGGCAG ACCCGGTGTT GGCCTTTTAC AACGCTCTCC TCGTTGCCGC ATATGGAAAA 
AAGAAGCATA AGGGTGGCTG CGCCCCTGCC GCTGCTGTGC CACAGGCAGA TGCGCCGACA 
GTGATCCGCT TCGATCAGCT CACGTCGGCG ATCCGCACGA CACGTCAGTG GCGCACCCCT 
GAAGTTGCGG CTCTGCAGCG CCAGCTGCAG TACCACGTCT TCGATGTCCT TTACAGCCGT 
GAGTTCCCCT ACGGCCGAGG GTCGGCGGTT CCGTTCAGCG TCCGCTACGG CGTTCTTGAG 
CGACTGCTGG CATCCGCGAC AGCTTACAAT CTCGCGCATA TTTCCCAGTA CAATCCACTG 
GTGCTGCGGC GCGTGCCGAG CTATTCGTGC ACCATCGATG CCGTTGACGC CGTGCTGCAA 
GCCGCCATAC GGGTGGGCTA CGAGGGCATC ATGATCCGCC GTGAGTGCCA AGGCGCCACG 
ACGGCTGCCG GCAAGGACGG CAGCGAAAAG GTGGAGTCGG CAACCAAGAA GATTAAGCGG 
TGCGCTGCAT CCAGCGGAAG TAAAGCCGGC GCGGGGGCTG CGACGGCGAA CAGTGACGGC 
GGGTACGGCT ATGGGCAGCG CAGCAGCACG TTGCTGAAGT ACAAGGTGAT GCAGGATGCA 
GAGTACGTCA TCGTAGGCGC GGTGGAAGGC TCCGGCAAGT GGAAGGGCTT TCTCGGCTCT 
TTCATCTGCG TGACACCAGA CAAGAAGCAC CGCTTCACCG TCACCCCAGC GAGCACTGAT 
GCCGACAAGC AGCGGATGTG GCAGTCGTGG AAGACGGTTT ACAAGGGGAA GGCGCTGACG 
GTGCAGTACC AGGAGATCAC CGCAGACGGC GTACCGCGCT TCCCGGTGGG CAAGTGCGTT 
CGCGGCGCAG CTGATGGGCG TGATTGGCTG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001470474.1
CDS	1..1893
Translation	MKATVLRRPGGSGLVGYPTLLRLRAVKRVATAKVKGTARSGRAKEAAAPTAGSGHGSHKLSLAEFHPAIARTWIAAASNKMLQPQHVAPDSRKLAWWICPSCHHQHNKRIDLHLAAGGACPKCEAKPTLAGGASVKKSASSSRGASNPASPLRKKQASAASAHEPVPAAAALRHRCRPNSTLDTIAARNANLLSKSVADNQYLRVQETRNLLPMLAKSYDKERWKIAPAEVLQVSPKLDGIRCVAAYRIDTKQVLFFSRSGTLFECCDDAIEPALRYLFEKDPTLVLDGELYNDSINLAQLSTACKTAGKTTPPPPTAALAEADPVLAFYNALLVAAYGKKKHKGGCAPAAAVPQADAPTVIRFDQLTSAIRTTRQWRTPEVAALQRQLQYHVFDVLYSREFPYGRGSAVPFSVRYGVLERLLASATAYNLAHISQYNPLVLRRVPSYSCTIDAVDAVLQAAIRVGYEGIMIRRECQGATTAAGKDGSEKVESATKKIKRCAASSGSKAGAGAATANSDGGYGYGQRSSTLLKYKVMQDAEYVIVGAVEGSGKWKGFLGSFICVTPDKKHRFTVTPASTDADKQRMWQSWKTVYKGKALTVQYQEITADGVPRFPVGKCVRGAADGRDWL

Target ORF information:

RefSeq Version	XM_001470437.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative DNA ligase k alpha partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001470437.1

ORF Insert Sequence:

ATGAAGGCGA CTGTGTTGCG ACGGCCGGGC GGCAGCGGCT TAGTCGGGTA TCCGACGCTT 
CTGCGGCTGC GGGCGGTGAA GCGGGTGGCA ACGGCAAAGG TGAAAGGCAC GGCGAGGAGC 
GGCAGGGCCA AAGAAGCGGC TGCGCCGACA GCGGGCAGCG GTCATGGCTC ACACAAACTG 
TCCTTGGCGG AGTTTCACCC TGCCATCGCC CGCACATGGA TCGCGGCGGC GTCGAACAAG 
ATGCTGCAGC CGCAGCACGT CGCCCCTGAT AGCCGCAAAC TGGCGTGGTG GATTTGCCCG 
TCTTGCCACC ATCAGCACAA CAAGCGCATA GATCTTCACC TCGCCGCCGG GGGCGCGTGC 
CCCAAGTGTG AAGCAAAACC CACCTTGGCT GGCGGCGCGT CCGTGAAGAA GAGTGCGTCG 
AGTTCCCGTG GCGCCAGCAA TCCCGCCTCG CCGTTGAGGA AGAAGCAGGC ATCCGCTGCG 
TCAGCGCATG AGCCTGTCCC TGCCGCAGCA GCACTTCGCC ATCGCTGCCG CCCCAACTCG 
ACACTCGACA CCATCGCCGC CCGGAACGCG AACCTCCTCA GCAAGAGCGT AGCCGACAAT 
CAGTACCTTC GCGTGCAGGA GACGCGCAAT CTGCTTCCGA TGCTGGCAAA GAGCTACGAT 
AAGGAACGTT GGAAAATCGC GCCTGCTGAG GTGCTGCAGG TGTCGCCGAA GCTGGACGGT 
ATCCGCTGCG TCGCCGCGTA CCGAATAGAC ACGAAGCAGG TGCTCTTCTT CAGCCGCTCC 
GGCACGCTCT TCGAGTGCTG TGATGACGCC ATCGAGCCAG CGCTGCGGTA CCTCTTCGAG 
AAGGACCCGA CACTCGTTCT TGACGGCGAG CTGTACAACG ACTCGATCAA CCTAGCGCAG 
CTTAGCACTG CGTGTAAAAC AGCAGGAAAA ACAACCCCGC CGCCCCCCAC GGCGGCATTG 
GCTGAGGCAG ACCCGGTGTT GGCCTTTTAC AACGCTCTCC TCGTTGCCGC ATATGGAAAA 
AAGAAGCATA AGGGTGGCTG CGCCCCTGCC GCTGCTGTGC CACAGGCAGA TGCGCCGACA 
GTGATCCGCT TCGATCAGCT CACGTCGGCG ATCCGCACGA CACGTCAGTG GCGCACCCCT 
GAAGTTGCGG CTCTGCAGCG CCAGCTGCAG TACCACGTCT TCGATGTCCT TTACAGCCGT 
GAGTTCCCCT ACGGCCGAGG GTCGGCGGTT CCGTTCAGCG TCCGCTACGG CGTTCTTGAG 
CGACTGCTGG CATCCGCGAC AGCTTACAAT CTCGCGCATA TTTCCCAGTA CAATCCACTG 
GTGCTGCGGC GCGTGCCGAG CTATTCGTGC ACCATCGATG CCGTTGACGC CGTGCTGCAA 
GCCGCCATAC GGGTGGGCTA CGAGGGCATC ATGATCCGCC GTGAGTGCCA AGGCGCCACG 
ACGGCTGCCG GCAAGGACGG CAGCGAAAAG GTGGAGTCGG CAACCAAGAA GATTAAGCGG 
TGCGCTGCAT CCAGCGGAAG TAAAGCCGGC GCGGGGGCTG CGACGGCGAA CAGTGACGGC 
GGGTACGGCT ATGGGCAGCG CAGCAGCACG TTGCTGAAGT ACAAGGTGAT GCAGGATGCA 
GAGTACGTCA TCGTAGGCGC GGTGGAAGGC TCCGGCAAGT GGAAGGGCTT TCTCGGCTCT 
TTCATCTGCG TGACACCAGA CAAGAAGCAC CGCTTCACCG TCACCCCAGC GAGCACTGAT 
GCCGACAAGC AGCGGATGTG GCAGTCGTGG AAGACGGTTT ACAAGGGGAA GGCGCTGACG 
GTGCAGTACC AGGAGATCAC CGCAGACGGC GTACCGCGCT TCCCGGTGGG CAAGTGCGTT 
CGCGGCGCAG CTGATGGGCG TGATTGGCTG TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_26_1320 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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