LINJ_06_0640 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_06_0640
Entrez Gene ID	4961300
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001463107.1	XP_001463144.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_06_0640 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_06_0640 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc00026	XM_001463107.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_06_0640 ( XM_001463107.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001463144.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc00026
Clone ID Related Accession (Same CDS sequence)	XM_001463107.1
Accession Version	XM_001463107.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3033bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009277). COMPLETENESS: incomplete on both ends.

ATGAAGGGCA TCGGCCGCCA GTCTTTCCTC GTCGTGTTTG ACTTTGACCA CACCATTGTC 
GACTGCAATA CGGATGAGGT CATCCCAGCG GCGCTGGGCC GCCGCGACAT GCAGCGGCGC 
ATGATGTTGG AGAAGAATCG AATGCAGTGG ACGAAGCTGA TGGACACCAT CATCGCGCCC 
TTCCACAAGG AGGAGCTGAG GAAGGCGGCG CAGGACAGTG TTACCATCGA CCCGAAGATG 
CCCGAAGTCT TTCAGTATCT GAGAGATGCA CAGAAGCAGT ACGTCGTCGC GGCGCCTGGG 
CCGGCGTCAC CTGGCGATGC GCGTGCGGCG ACAGTGCAGG ACAACATGCC GGGTTTTATA 
GAGATGAACA TTGCCAGTGA TTCGAACCTT CTGTTCATTG ATGCGGCGCT CGATGCGCGC 
CTCCCGGGTG TGAAGGAGTG CATGTCGCAG ATTCACAGCA ACCCGTACTA CGACCTGACA 
GCGCCTGGCG TGTCTCAGAG TGCCGGCTTG GACGTTTGCT ATGGCGCAGA CCGGCCGGCC 
GGCAGCCTCA ACGTGAACGA CGAGGCGGAC CGTAATGCAA TGCACAACCC GGGCATGACG 
CGCAAGTCGC GCGTGTGCTG GTACGAGCCG CACGGCCACC AGTGTCAGTG CTGCCTCGCC 
GGCGGAAAGC CGAACATGTG CAAGTCCATT ATCATCGAAC GTCTACTGCA GACAACGTCG 
CTCATCGATC CAACTGTCAT CTTCATCGGC GATGGCGCGA ACGACTACTG CCCCGTGCTG 
AACGTGCTGC GGCCGCGTGA CTACATGTTC GCCCGCCGCG ACTTTCCGAT CCACCACATC 
CTCGCCGGTG CGCCGCATCC GGCATCCAGC AAGAACGGCG TCGCCGGCGA CGTTGGCGGG 
TGCTGCCATA TTGGCCTGTG GAGGAACGCT GCGGAGCTGC GAGAGCTCTT CCAGCTTGCC 
ATGGAGCACC CTGGCGCACG ACTCCCGACG CTCGTGCGGT TCCGCGATGC GGCTGCAAAG 
GAGTTCCGCT CCGTCACGAT GGTAAAACGC ATACCTTCCG TGCTGAGGCG TACCTTGGAG 
GAGCTGCGCA ACGCGTCCGC GGCGTCCGAG AAGGGACGCC AGCGTGCCAT TGAGCTCATG 
CGCGCTGTAG AGGCGAACGG CATGGTGCCG CCGCTGCCGG GTCAGGCGTG CGTGCCGGCG 
TGGCTGCGCA ACTACGCATA CGTCTCTGAA TACGACAAAG TCAACGCCAC TGATGTGGCA 
CGGCGAGTGA GCCCGCCGGC GGCAAAGGGC AAGGAGCATC TTATTGTGCC GCGCTGGGGT 
CAGTTGCCGT GGCTGCATGG GGAGATCTAC TTTTACCATG TGCTGTGGCA GTGCTTAATG 
ATGCAGGACG TGGCCGAGGG GGCAGCGGAA GAGGATGTGA CAGCCGCCGC GGGGACGGCG 
GCCACCTTCA ACGTTGTCAC TCAGCACGCC TTGCACAACC CGCTGTTCTC GCAGGAGTGC 
CGCGTTACGT CGACGCCGGG ATTGGTCAGC CCGCCGGCGA TCGCGATGCA GAGCGCACGG 
AACGTGGCGC CGCTGGTGTG CCGGCCTGCC TCGATCGCCG AGAGTGTCGT GGTACGACGC 
GTGCAGCCCG GCAGCGATCG CCCCGCTAGG CAGGTGCCAT ACGCGGAGAT GGTGCGGCAG 
CCGAGCGGCT GCGTCATCCC TCCAGCCGCA ACGTTCTTCT CCCAATATCG CGACATCTTT 
GCCCACGAGA AGCACGATGT CTTGATGGAC TTCTTGAAAG TACGCGTGGT GCCGATGCTG 
GCGTGCCAAC CATGGGGCGC CGATCGCGAC TACGGCGGCA TCTTGCTGCG GTGGATGCTC 
TGGGGCAACG GCATCGACCT CTCTATGTTC ACGCTCGATC AGCTGGCCGA CTCGCATGGC 
AAGGCAGCGG GCGGCGAGGA CAAGTCACAC GCAGGCGATG TGGCGGCGCT GCGGGAGGCC 
GAGAAGGCTG CGTCCCTGGC GCAGGATGCG AACCTGGTTG GTAACGAGGT GGCCAAGGTG 
GAGGCCTACC TGCAGCGGCT GCTGGACCCT GGCGACGCAT GCAACGGTAC TCGTCAGGTG 
GACGTCGTCA TGGACAACGT TGGCGTGGAG TGCATCTCCG ACCTGTGCTT TGGTTTGTGG 
TACGTGAACC AGGCGGCCAA GCTCGGCGCT GCCGCTGCTG CCGGCAACGC GCGTGTCGTG 
TTTCACGTCA AGCCAATGCC GTACTACGTC TCCGACGTGA CGCCGCGCGA CTTCGACCTC 
ACACTCGCCG CTTTGGAGGA TTCCTACACA AGCGAGGCCT TCGAGCCGGA TGCGGCGAGG 
CGGATGACGC TGAAAGCCGT GCTGGAGCCG TTCATTGCGC AGGTGCGGGA CTGCTTCGCG 
CGTGGCGCCT TCGCTGTCGA CGCCGACACC GTGTGGACGC AGCCGTCCGA GTACCGAGAC 
CTGCCGCCGC GTGTGATAAA CCTGTACTTC TTTACCCAGT GCGTGTCGGC ACCGACTTCT 
GCTCGTGATG CTGCCACGAC GATGGCGGTG TCGGGTGTGG CTGCGGCGCT GGCCGACACG 
GCCTGCCCTG CCTCCTCGGC GGCCGGGCTC TACCGCATGA ACAAGGCGCA CGCCCAGGCC 
CGCAGCGGGT TGGTGCTCTT CAAGGGCGAC CTTAACTACC GCCGCCTGGT TGGCGACCGC 
TACTGGGACC GCACCGACTT TTTGGCGACG CTGGCGAAGG AGGAGAGGCC TGACCTGCGC 
AAGGCGCCAG AGAGCTACAG CGCACTGGAG CAGTCCATCG TGGCGGAGTT GACGCAGGAC 
ACGCCGGCAA CCGCGCTGAT GGACGCACCG ACCTTCGCCG AGGTGATGTC GGCATATTGG 
CCAACGCAGG TCGTTCCAGT GTGCTCGATC CGTACGATTA AGAGCGAGTG CTGTGTCGGC 
GTGCCTGGCG ACGTGAAGGC GAGGCTGGAC CAGGAGCTAG GGCTGCCGTG GCGCGTCAGC 
GGCAAGTATG GAGAGATTCT CTTTGCTTGC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001463144.1
CDS	1..3033
Translation	MKGIGRQSFLVVFDFDHTIVDCNTDEVIPAALGRRDMQRRMMLEKNRMQWTKLMDTIIAPFHKEELRKAAQDSVTIDPKMPEVFQYLRDAQKQYVVAAPGPASPGDARAATVQDNMPGFIEMNIASDSNLLFIDAALDARLPGVKECMSQIHSNPYYDLTAPGVSQSAGLDVCYGADRPAGSLNVNDEADRNAMHNPGMTRKSRVCWYEPHGHQCQCCLAGGKPNMCKSIIIERLLQTTSLIDPTVIFIGDGANDYCPVLNVLRPRDYMFARRDFPIHHILAGAPHPASSKNGVAGDVGGCCHIGLWRNAAELRELFQLAMEHPGARLPTLVRFRDAAAKEFRSVTMVKRIPSVLRRTLEELRNASAASEKGRQRAIELMRAVEANGMVPPLPGQACVPAWLRNYAYVSEYDKVNATDVARRVSPPAAKGKEHLIVPRWGQLPWLHGEIYFYHVLWQCLMMQDVAEGAAEEDVTAAAGTAATFNVVTQHALHNPLFSQECRVTSTPGLVSPPAIAMQSARNVAPLVCRPASIAESVVVRRVQPGSDRPARQVPYAEMVRQPSGCVIPPAATFFSQYRDIFAHEKHDVLMDFLKVRVVPMLACQPWGADRDYGGILLRWMLWGNGIDLSMFTLDQLADSHGKAAGGEDKSHAGDVAALREAEKAASLAQDANLVGNEVAKVEAYLQRLLDPGDACNGTRQVDVVMDNVGVECISDLCFGLWYVNQAAKLGAAAAAGNARVVFHVKPMPYYVSDVTPRDFDLTLAALEDSYTSEAFEPDAARRMTLKAVLEPFIAQVRDCFARGAFAVDADTVWTQPSEYRDLPPRVINLYFFTQCVSAPTSARDAATTMAVSGVAAALADTACPASSAAGLYRMNKAHAQARSGLVLFKGDLNYRRLVGDRYWDRTDFLATLAKEERPDLRKAPESYSALEQSIVAELTQDTPATALMDAPTFAEVMSAYWPTQVVPVCSIRTIKSECCVGVPGDVKARLDQELGLPWRVSGKYGEILFAC

Target ORF information:

RefSeq Version	XM_001463107.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001463107.1

ORF Insert Sequence:

ATGAAGGGCA TCGGCCGCCA GTCTTTCCTC GTCGTGTTTG ACTTTGACCA CACCATTGTC 
GACTGCAATA CGGATGAGGT CATCCCAGCG GCGCTGGGCC GCCGCGACAT GCAGCGGCGC 
ATGATGTTGG AGAAGAATCG AATGCAGTGG ACGAAGCTGA TGGACACCAT CATCGCGCCC 
TTCCACAAGG AGGAGCTGAG GAAGGCGGCG CAGGACAGTG TTACCATCGA CCCGAAGATG 
CCCGAAGTCT TTCAGTATCT GAGAGATGCA CAGAAGCAGT ACGTCGTCGC GGCGCCTGGG 
CCGGCGTCAC CTGGCGATGC GCGTGCGGCG ACAGTGCAGG ACAACATGCC GGGTTTTATA 
GAGATGAACA TTGCCAGTGA TTCGAACCTT CTGTTCATTG ATGCGGCGCT CGATGCGCGC 
CTCCCGGGTG TGAAGGAGTG CATGTCGCAG ATTCACAGCA ACCCGTACTA CGACCTGACA 
GCGCCTGGCG TGTCTCAGAG TGCCGGCTTG GACGTTTGCT ATGGCGCAGA CCGGCCGGCC 
GGCAGCCTCA ACGTGAACGA CGAGGCGGAC CGTAATGCAA TGCACAACCC GGGCATGACG 
CGCAAGTCGC GCGTGTGCTG GTACGAGCCG CACGGCCACC AGTGTCAGTG CTGCCTCGCC 
GGCGGAAAGC CGAACATGTG CAAGTCCATT ATCATCGAAC GTCTACTGCA GACAACGTCG 
CTCATCGATC CAACTGTCAT CTTCATCGGC GATGGCGCGA ACGACTACTG CCCCGTGCTG 
AACGTGCTGC GGCCGCGTGA CTACATGTTC GCCCGCCGCG ACTTTCCGAT CCACCACATC 
CTCGCCGGTG CGCCGCATCC GGCATCCAGC AAGAACGGCG TCGCCGGCGA CGTTGGCGGG 
TGCTGCCATA TTGGCCTGTG GAGGAACGCT GCGGAGCTGC GAGAGCTCTT CCAGCTTGCC 
ATGGAGCACC CTGGCGCACG ACTCCCGACG CTCGTGCGGT TCCGCGATGC GGCTGCAAAG 
GAGTTCCGCT CCGTCACGAT GGTAAAACGC ATACCTTCCG TGCTGAGGCG TACCTTGGAG 
GAGCTGCGCA ACGCGTCCGC GGCGTCCGAG AAGGGACGCC AGCGTGCCAT TGAGCTCATG 
CGCGCTGTAG AGGCGAACGG CATGGTGCCG CCGCTGCCGG GTCAGGCGTG CGTGCCGGCG 
TGGCTGCGCA ACTACGCATA CGTCTCTGAA TACGACAAAG TCAACGCCAC TGATGTGGCA 
CGGCGAGTGA GCCCGCCGGC GGCAAAGGGC AAGGAGCATC TTATTGTGCC GCGCTGGGGT 
CAGTTGCCGT GGCTGCATGG GGAGATCTAC TTTTACCATG TGCTGTGGCA GTGCTTAATG 
ATGCAGGACG TGGCCGAGGG GGCAGCGGAA GAGGATGTGA CAGCCGCCGC GGGGACGGCG 
GCCACCTTCA ACGTTGTCAC TCAGCACGCC TTGCACAACC CGCTGTTCTC GCAGGAGTGC 
CGCGTTACGT CGACGCCGGG ATTGGTCAGC CCGCCGGCGA TCGCGATGCA GAGCGCACGG 
AACGTGGCGC CGCTGGTGTG CCGGCCTGCC TCGATCGCCG AGAGTGTCGT GGTACGACGC 
GTGCAGCCCG GCAGCGATCG CCCCGCTAGG CAGGTGCCAT ACGCGGAGAT GGTGCGGCAG 
CCGAGCGGCT GCGTCATCCC TCCAGCCGCA ACGTTCTTCT CCCAATATCG CGACATCTTT 
GCCCACGAGA AGCACGATGT CTTGATGGAC TTCTTGAAAG TACGCGTGGT GCCGATGCTG 
GCGTGCCAAC CATGGGGCGC CGATCGCGAC TACGGCGGCA TCTTGCTGCG GTGGATGCTC 
TGGGGCAACG GCATCGACCT CTCTATGTTC ACGCTCGATC AGCTGGCCGA CTCGCATGGC 
AAGGCAGCGG GCGGCGAGGA CAAGTCACAC GCAGGCGATG TGGCGGCGCT GCGGGAGGCC 
GAGAAGGCTG CGTCCCTGGC GCAGGATGCG AACCTGGTTG GTAACGAGGT GGCCAAGGTG 
GAGGCCTACC TGCAGCGGCT GCTGGACCCT GGCGACGCAT GCAACGGTAC TCGTCAGGTG 
GACGTCGTCA TGGACAACGT TGGCGTGGAG TGCATCTCCG ACCTGTGCTT TGGTTTGTGG 
TACGTGAACC AGGCGGCCAA GCTCGGCGCT GCCGCTGCTG CCGGCAACGC GCGTGTCGTG 
TTTCACGTCA AGCCAATGCC GTACTACGTC TCCGACGTGA CGCCGCGCGA CTTCGACCTC 
ACACTCGCCG CTTTGGAGGA TTCCTACACA AGCGAGGCCT TCGAGCCGGA TGCGGCGAGG 
CGGATGACGC TGAAAGCCGT GCTGGAGCCG TTCATTGCGC AGGTGCGGGA CTGCTTCGCG 
CGTGGCGCCT TCGCTGTCGA CGCCGACACC GTGTGGACGC AGCCGTCCGA GTACCGAGAC 
CTGCCGCCGC GTGTGATAAA CCTGTACTTC TTTACCCAGT GCGTGTCGGC ACCGACTTCT 
GCTCGTGATG CTGCCACGAC GATGGCGGTG TCGGGTGTGG CTGCGGCGCT GGCCGACACG 
GCCTGCCCTG CCTCCTCGGC GGCCGGGCTC TACCGCATGA ACAAGGCGCA CGCCCAGGCC 
CGCAGCGGGT TGGTGCTCTT CAAGGGCGAC CTTAACTACC GCCGCCTGGT TGGCGACCGC 
TACTGGGACC GCACCGACTT TTTGGCGACG CTGGCGAAGG AGGAGAGGCC TGACCTGCGC 
AAGGCGCCAG AGAGCTACAG CGCACTGGAG CAGTCCATCG TGGCGGAGTT GACGCAGGAC 
ACGCCGGCAA CCGCGCTGAT GGACGCACCG ACCTTCGCCG AGGTGATGTC GGCATATTGG 
CCAACGCAGG TCGTTCCAGT GTGCTCGATC CGTACGATTA AGAGCGAGTG CTGTGTCGGC 
GTGCCTGGCG ACGTGAAGGC GAGGCTGGAC CAGGAGCTAG GGCTGCCGTG GCGCGTCAGC 
GGCAAGTATG GAGAGATTCT CTTTGCTTGC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_06_0640 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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