syt11a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	syt11a
Entrez Gene ID	406769
Full Name	synaptotagmin XIa
Synonyms	fc52d10,fi68d01,syt11,wu:fc52d10,wu:fi68d01,zgc:55556
General protein information	Preferred Names synaptotagmin XIa Names synaptotagmin XIa synaptotagmin XI
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_213460.2	NP_998625.2	synaptotagmin XIa

Pathways from BioSystems

Homologies

Bos taurus (cattle)	SYT11	NP_001092641.1
Danio rerio (zebrafish)	syt11b	NP_001156003.1
Rattus norvegicus (Norway rat)	Syt11	NP_113855.2
Macaca mulatta (Rhesus monkey)	SYT11	XP_001113446.1
Canis lupus familiaris (dog)	SYT11	XP_005622777.1
Mus musculus (house mouse)	Syt11	NP_061274.2
Gallus gallus (chicken)	SYT11	XP_426721.3
Homo sapiens (human)	SYT11	NP_689493.3
Pan troglodytes (chimpanzee)	SYT11	XP_513867.3
Danio rerio (zebrafish)	syt11a	NP_998625.2

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 03)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

A manual collection of Syt, Esyt, Rph3a, Rph3al, Doc2, and Dblc2 genes from 46 metazoan genomes--an open access resource for neuroscience and evolutionary biology.
Craxton M
BMC genomics1137(2010 Jan)

Evolutionary genomics of plant genes encoding N-terminal-TM-C2 domain proteins and the similar FAM62 genes and synaptotagmin genes of metazoans.
Craxton M
BMC genomics8259(2007 Jul)

Synaptotagmin gene content of the sequenced genomes.
Craxton M
BMC genomics5(1)43(2004 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following syt11a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the syt11a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa30994	NM_213460.2 Latest version!	Danio rerio synaptotagmin XIa (syt11a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

syt11a ( NM_213460.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_998625.2 Danio rerio synaptotagmin XIa (syt11a), mRNA.

Price & Availability↑

CloneID	ODa30994
Clone ID Related Accession (Same CDS sequence)	NM_213460.2
Accession Version	NM_213460.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1356bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1542902400000
Organism	Danio rerio(zebrafish)
Product	synaptotagmin XIa
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX548249.13. On Jun 26, 2009 this sequence version replaced NM_213460.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GDQH01024689.1, BC097077.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCTGAGA TGACCAATTT AAAACCAACC TATGATGTGT CCCCAGTGCT TGCAGGTTTT 
CTGGGTGCAG GGGTCTTGGT TGTGTCCGTG ACAGTGGCTG TTTTCCTGTG GACATGCTGT 
CAGAGGCGAT ATCGTCAAAT GACAGGTGCG TACAAGCTGA CCAGTGGCCC CTACGACCCC 
CCCGTCGACC CCCCCTACAA GTTCATCCAC ATGCTCAAAG GCATCAGCAT CTACCCTGAA 
ACCCTCAGCA ACAGCAAGAA GATTGTGCGG GTGGGACGTC GCTCTGCATC GAACTCCTTG 
TTGAGAGAAT GGGGTCGCGG ATCTCGAAAC GGTGACGTGC TGCTTGTGGA TGCAGACCCT 
GAATGTGGTA CCACACACCT ACAAATGAAC CACCTGGTCC CTCCTGTGGG TCCTCCTAGA 
CTGGAGAGGG CGCTGCCTAT CCGGGCCGAC TACTGCTGTA TGGAGAGCAG CTCAGGAAGC 
AGCAGCGAAG CTCACAGCAA AACGGCGTCT CCTTACAGTC TCAACTCCCC TTCTCTGGGG 
ACGCTCAGTT TGGCTATTGA CTACAACTTC CCCAAGAAAG CCCTGGTCGT GACTATCATA 
GGGGCGCAGG GGCTCCCAGC AGTGGATGAA CAGGCAGGCA GCTCTGACCC CTATGTGAAG 
ATGACCATTC TGCCTGAGAA GAAGCACCGG GTGAAGACGC GTGTTCTGAG GAAGACTCTG 
GAGCCTGTGT TTGACGAAAC GTTCACTTTC TACGGTGTCC CATACAGCTC GCTGCCAGAG 
CTTACACTGC ACTTCCTGGT GCTCAGCTTT GATCGGTTTG CACGGGATGA TGTCATCGGG 
GAGGCAGTGG TGCCGTTAGA AGGCGTGGAT CCCAGCACGG GGAGAGCGCA CATCACCCAG 
CAAATTAGCA AGAGGAACAC ACAGTGTGAA AGCCGTGGGG AGTTGCTGGT CTCTCTGTCC 
TATCATCCTG TTACTCACAG GCTTAATGTG GTTGTCCTAA AGGCCAAACA CCTTCCAACC 
ATGGACATCA CTGGCCTGTC AGGCAACCCG TATGTTAAAG TGAACGTCTT CTACGGCCGC 
AAACGCATAG CCAAGAAGAA GACACACGTG AAGAAATGCA CACTCAATCC CGTATTCAAT 
GAATCATTTA TCTACGATGT TCCCGCTGAG CTAATGCCGG ACATCTCCGT GGAGTTTCTG 
GTCATCGATT TTGACCGCAC AACAAAGAAT GAGGTCGTGG GTCGGCTGGT TTTGGGTGGT 
CAGAGCCCCA TTCCATCAGG GGTCACCCAT TGGAGGGAAG TCTGTGACAA CCCGCGGCGG 
CAGATCGCCA AGTGGCATAA CCTTATAGAG TACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998625.2
CDS	186..1541
Translation	MAEMTNLKPTYDVSPVLAGFLGAGVLVVSVTVAVFLWTCCQRRYRQMTGAYKLTSGPYDPPVDPPYKFIHMLKGISIYPETLSNSKKIVRVGRRSASNSLLREWGRGSRNGDVLLVDADPECGTTHLQMNHLVPPVGPPRLERALPIRADYCCMESSSGSSSEAHSKTASPYSLNSPSLGTLSLAIDYNFPKKALVVTIIGAQGLPAVDEQAGSSDPYVKMTILPEKKHRVKTRVLRKTLEPVFDETFTFYGVPYSSLPELTLHFLVLSFDRFARDDVIGEAVVPLEGVDPSTGRAHITQQISKRNTQCESRGELLVSLSYHPVTHRLNVVVLKAKHLPTMDITGLSGNPYVKVNVFYGRKRIAKKKTHVKKCTLNPVFNESFIYDVPAELMPDISVEFLVIDFDRTTKNEVVGRLVLGGQSPIPSGVTHWREVCDNPRRQIAKWHNLIEY

Target ORF information:

RefSeq Version	NM_213460.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio synaptotagmin XIa (syt11a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213460.2

ORF Insert Sequence:

ATGGCTGAGA TGACCAATTT AAAACCAACC TATGATGTGT CCCCAGTGCT TGCAGGTTTT 
CTGGGTGCAG GGGTCTTGGT TGTGTCCGTG ACAGTGGCTG TTTTCCTGTG GACATGCTGT 
CAGAGGCGAT ATCGTCAAAT GACAGGTGCG TACAAGCTGA CCAGTGGCCC CTACGACCCC 
CCCGTCGACC CCCCCTACAA GTTCATCCAC ATGCTCAAAG GCATCAGCAT CTACCCTGAA 
ACCCTCAGCA ACAGCAAGAA GATTGTGCGG GTGGGACGTC GCTCTGCATC GAACTCCTTG 
TTGAGAGAAT GGGGTCGCGG ATCTCGAAAC GGTGACGTGC TGCTTGTGGA TGCAGACCCT 
GAATGTGGTA CCACACACCT ACAAATGAAC CACCTGGTCC CTCCTGTGGG TCCTCCTAGA 
CTGGAGAGGG CGCTGCCTAT CCGGGCCGAC TACTGCTGTA TGGAGAGCAG CTCAGGAAGC 
AGCAGCGAAG CTCACAGCAA AACGGCGTCT CCTTACAGTC TCAACTCCCC TTCTCTGGGG 
ACGCTCAGTT TGGCTATTGA CTACAACTTC CCCAAGAAAG CCCTGGTCGT GACTATCATA 
GGGGCGCAGG GGCTCCCAGC AGTGGATGAA CAGGCAGGCA GCTCTGACCC CTATGTGAAG 
ATGACCATTC TGCCTGAGAA GAAGCACCGG GTGAAGACGC GTGTTCTGAG GAAGACTCTG 
GAGCCTGTGT TTGACGAAAC GTTCACTTTC TACGGTGTCC CATACAGCTC GCTGCCAGAG 
CTTACACTGC ACTTCCTGGT GCTCAGCTTT GATCGGTTTG CACGGGATGA TGTCATCGGG 
GAGGCAGTGG TGCCGTTAGA AGGCGTGGAT CCCAGCACGG GGAGAGCGCA CATCACCCAG 
CAAATTAGCA AGAGGAACAC ACAGTGTGAA AGCCGTGGGG AGTTGCTGGT CTCTCTGTCC 
TATCATCCTG TTACTCACAG GCTTAATGTG GTTGTCCTAA AGGCCAAACA CCTTCCAACC 
ATGGACATCA CTGGCCTGTC AGGCAACCCG TATGTTAAAG TGAACGTCTT CTACGGCCGC 
AAACGCATAG CCAAGAAGAA GACACACGTG AAGAAATGCA CACTCAATCC CGTATTCAAT 
GAATCATTTA TCTACGATGT TCCCGCTGAG CTAATGCCGG ACATCTCCGT GGAGTTTCTG 
GTCATCGATT TTGACCGCAC AACAAAGAAT GAGGTCGTGG GTCGGCTGGT TTTGGGTGGT 
CAGAGCCCCA TTCCATCAGG GGTCACCCAT TGGAGGGAAG TCTGTGACAA CCCGCGGCGG 
CAGATCGCCA AGTGGCATAA CCTTATAGAG TACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

A manual collection of Syt, Esyt, Rph3a, Rph3al, Doc2, and Dblc2 genes from 46 metazoan genomes--an open access resource for neuroscience and evolutionary biology.
BMC genomics1137(2010 Jan)
Craxton M

Evolutionary genomics of plant genes encoding N-terminal-TM-C2 domain proteins and the similar FAM62 genes and synaptotagmin genes of metazoans.
BMC genomics8259(2007 Jul)
Craxton M

Synaptotagmin gene content of the sequenced genomes.
BMC genomics5(1)43(2004 Jul)
Craxton M