BRAFLDRAFT_119698 cDNA ORF clone, Branchiostoma floridae(Florida lancelet)

Gene
Clones
gRNAs

Summary

Gene Symbol	BRAFLDRAFT_119698
Entrez Gene ID	7225611
Full Name	hypothetical protein
Gene Type	protein-coding
Organism	Branchiostoma floridae(Florida lancelet)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002603268.1	XP_002603314.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The amphioxus genome and the evolution of the chordate karyotype.
Putnam NH, Butts T, Ferrier DE, Furlong RF, Hellsten U, Kawashima T, Robinson-Rechavi M, Shoguchi E, Terry A, Yu JK, Benito-Gutiérrez EL, Dubchak I, Garcia-Fernàndez J, Gibson-Brown JJ, Grigoriev IV, Horton AC, de Jong PJ, Jurka J, Kapitonov VV, Kohara Y, Kuroki Y, Lindquist E, Lucas S, Osoegawa K, Pennacchio LA, Salamov AA, Satou Y, Sauka-Spengler T, Schmutz J, Shin-I T, Toyoda A, Bronner-Fraser M, Fujiyama A, Holland LZ, Holland PW, Satoh N, Rokhsar DS
Nature453(7198)1064-71(2008 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following BRAFLDRAFT_119698 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BRAFLDRAFT_119698 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBb09468	XM_002603268.1 Latest version!	Branchiostoma floridae hypothetical protein, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00

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***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

BRAFLDRAFT_119698 ( XM_002603268.1 ) cDNA ORF clone, Branchiostoma floridae(Florida lancelet) -> XP_002603314.1 Branchiostoma floridae hypothetical protein, mRNA.

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CloneID	OBb09468
Clone ID Related Accession (Same CDS sequence)	XM_002603268.1
Accession Version	XM_002603268.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3651bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1254844800000
Organism	Branchiostoma floridae(Florida lancelet)
Product	hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_003101501). COMPLETENESS: incomplete on both ends.

ATGGCTGCCA TCGTCGACCA CGAATTCCCG ATTCACGGCC TTCTACCGAA AAGAGAGACC 
GGCGCTTCGG CTTTCCTCGC CAAATATCCC GAGTATGACG GCAGGGGAGT CACCATTGCT 
ATCCTGGACA CAGGAGTGGA CCCAGGAGCG CCAGGCTTAC AGCAAACCTC AGATGGGAGG 
CCAAAGATCG TGGATATCAT CGACACCACG GGGAGCGGAG ATGTGGACGT GTCAACTGTC 
GTGGAGCCAA AAGATGGGGA GATTGTGGGA CTGTCGGGGC GAACCCTTAA GGTCCCAGCT 
AGTTGGGAGA ATCCAACCGG CCGTTACCAC ATAGGGGTGA AGAACATGTA TGAGCTCTTC 
CCTAAACAAC TCAGAGACAG GACTCAGAAA GACAAGAAAG AGAAGACCTG GGACCCTCCA 
CACAGGGTGG CTCTGGCTGA GGCAATCAGG AAACTGGATG AGTTTGATAC AGCACACCCC 
AACCCTACAG CACAGGATGA GAAGCTCCAG AGAGAAGACC TCCAGGCCCA ACTGGACATC 
CTGACCAGTC AGGAGAAGAA GTACTCGGAC CCTGGTCCTG TGTGCGACTG TCTGGTCTGG 
CACGATGGGA ACACATGGAG GGCTGTGTTA GACACCAGTG AGACAGGAGA CCTGGAGTCG 
TGTACAGTAC TGGCCAGCTA CAGAGAACAG CACCAGTTTT GTATCTTTAG TTTGTTTGTT 
ATGTTTAACT ACTCTGTCAA CATCTACGAC GATGGAAAGG TTCTCAACAT ATGTGCCAAT 
GGAGGAGCCC ACGGTACCCA CGTGGCGTGT ATAGCCGCGG GAAACTTCCC AGATGACCCG 
GAGAGGAACG GAATTGCGCC GGGAGCGCAG ATCGTTGCCA TCAAGATCGG AGACTCCCGG 
CTTAGTACCA TGGAGACTGG CTCTGCACTT ATAAGAGCGA TGATTGCTGT AATTGATCAG 
AAGTGCGATC TGGTGAACTT CAGTTATGGG GAAGCGGCAC ACTGGCCTGA CAAGGGTCGA 
GTGTGTGACA TCATCTCGGA AGCTGTCAAC AAACATGGCG TCATCTTCGT GTCCAGCGCC 
GGGAACAACG GCCCCGCCCT GACGAGTGTC GGAACTCCGG GCGGAACGAC CTCCAGTATC 
ATTGGTGTCG GTGCCTTCGT GTCTCCAGAG ATGATGACAG CTGAATACTC TCTCAGGGAA 
AAGTTACCTA GCAACCAATA CACCTGGTCG TCAAGGGGAC CAACTATAGA CGGAGCCTTA 
GGTGTGAGTA TTTCCGCGCC AGGTGGCGCT ATAGCCTCCG TGCCTAACTG GACGCTCCGC 
GGCTCACAGC TAATGAACGG GACGTCCATG TCTTCACCAA ACGCCTGCGG GGGCATCGCT 
CTTGTACTGT CTGCGCTGAA GGCGACGGGT GTACCCTACA CCCCCTACAC TGTGAAGACT 
GCACTAGAGA ACACAGCACA GAAGGTGGAA GGGGTGGAGG TGTTCGCTCA GGGACATGGG 
GTGCTACAGG TGGAGAAGGC TTTTGACCAC ATCCGTCAAC ATGCCGACTC AGCGGAGAGA 
AACGTGCGGT TCTCTGTAGC GGTGAACGGT GGGAGGGGGG TGCACCTCAG ACAGGCCTTG 
TCACAGAGGA AACCTACCGA GATGACTGTC AGTATAGAAC CTGTGTATGC TGAGGACATA 
GAGGCCAATG AGAAGATATC TCTCTCCATC CATGTGAGCC TGGTGAGTGA GGTTCCATGG 
GTACATGTGC CGCCATGTTT GGAACTCATG AACACCCCAA GGACGTTTGT CATCAAGGTC 
GACCCAAGGG GACTCAGGGA AGGAGCTCAC TATACTGAGG TTTTAGGCTA TGACATCAGT 
AACCCCCAGA AGGGCCCCCT GTTCAGAGTG CCTGTGACAG TAGTGCGACC AGAGAGTGTA 
CAAGACAAGG TCCAGTACAA GGTGACCTCT GAGAGAGAAG TGACCTTCAA ACCTGGACAG 
GTACACAGGA GGTTCATTGA CGTGCCTCTG GGAGCCACGT GGGCAGAGGT TACCATCCAA 
TCCCTGTCCC CAGAGACAGT GGGGAGGTTC ATTCTCCACA TGGTACAGCT ACAGCCACAC 
TCTGCCTACA GGACGCACGA GTCCTACAAG TTCTTCAACC TTACAGAGCT GGGGGAGGTC 
TCCTATACCT GCCCTGTGTT GGAGGGAGTG ACAGTAGAAG TGTGCCTAGC ACGTTGGTGG 
GCAAGTCTTG GGGAGGTCAA TGTCAACTAC AACGTCACCT TTCATGGGTT ACAGCCAAGT 
GTCACTACAC TCAATCTGCA TGCAGCGGAC GGTATCACCA GGGTGGACGT TAAGTCTCCA 
CTGAAGCACG AGGATGTCCA ACCAAGCATC AAACTGGAGC ATGGTGTATG TCCGCTCAGG 
CCGTCCGAGT TTAAGATCCG CCCCCTGGGT GACAGGGACG TACTGCCTCC CAACCGACCA 
TCGTATGAGC TGGTGCTGAC ATATAACTAC CATCAGACTA AGACTTGTGA GGTGATGCCC 
CACTGCCCGA CCCTATCTGG CTTAAATTTG GACACGTACA ACTTCAAACT TGAGAAGGGA 
GACTATACCA TTAAGCTACA GATAAGGCAT GAGACTAAGG ACCTCCTGGA GAAACTGAAG 
GACGTGACCT TCCTGGTGCA ATACAAACTG CCCAGCGCCC TGTCGTTGGA CGTCTACCCG 
TCCAAGTCCA ACGCTCTGCT GGGCAAGGCC AAGTTCGGGA CACAGCGATG TGGTATAGGG 
GTGACGGCAC CGATGTTCAT CACCCCTCTA CCTGACGACA AGGTCCCAAA GGCTGCTAGT 
CCAGGACACT ACCTGGTAGG GCAGATCTCT TACGCCAAGG CCGAGCCTGG CAAGAAAACT 
GCCACCTACC CAGTGCACTA CGTGATATCA GCTGCCCCCT GTAAGCCCAA GAACGGTGGG 
AAAGACAAGG ACAAGAAGGA AGACAAGGAC CCCCAGGAGG AGTTTAATGA GGCTCTCAGG 
GATTTCAAGA TACAGTGGAT GTCAAAGCTT GACAGCAAGG CCATCTATCA GGAGTTGAAG 
GAACTGCACC CCAACCACCT ACCCTTACAT GTAGGACTAC TGCAGGCTCT GGATAATGAC 
AAGGAGAGAT TGAAACAGCT GGATGACATC ATCGCGGCTG CAGACGTTGT GATTGGTCAG 
GTGGACATGG CCGAACTGGC GAGCTTTCTC GCCCTGAAGG CTGACACGCG ATCAGACGCA 
GCGACCATCA AAGTTGAGAT GGAAAAGAAG AAGGCAACCC TGATCGACGC TGTGTGCAAG 
AAGGGAAATG CAGCGGCTGA CAAGGTTCTG CAGGCACTGG ATGGAGACGC AGTGGGCAGC 
ACAGAAATAG TGAAGGACCT CGCACTTGTG AAGGAAACGT TTGAGGAGCT GCTGAAATGG 
GCAGAACCAA TGGACATCAA GGTGGTCAGT TTTACCATGA AACATGCCAT GGTGTGTGGT 
CAGTATGGCA GGGCCATCAA GGCAGCACAG AAGATCCTGG ATGACAAACC TAACAAGGAA 
AACGAGAAGA AGTGTATAGA GCTTTACAAG AAGATTGGTT GGGACCACGT GGCCAAACAC 
TGCGAGCGCT GGCTGCCCGT CAGATACCCA CAATCCTACA CACTTTTCTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002603314.1
CDS	1..3651
Translation	MAAIVDHEFPIHGLLPKRETGASAFLAKYPEYDGRGVTIAILDTGVDPGAPGLQQTSDGRPKIVDIIDTTGSGDVDVSTVVEPKDGEIVGLSGRTLKVPASWENPTGRYHIGVKNMYELFPKQLRDRTQKDKKEKTWDPPHRVALAEAIRKLDEFDTAHPNPTAQDEKLQREDLQAQLDILTSQEKKYSDPGPVCDCLVWHDGNTWRAVLDTSETGDLESCTVLASYREQHQFCIFSLFVMFNYSVNIYDDGKVLNICANGGAHGTHVACIAAGNFPDDPERNGIAPGAQIVAIKIGDSRLSTMETGSALIRAMIAVIDQKCDLVNFSYGEAAHWPDKGRVCDIISEAVNKHGVIFVSSAGNNGPALTSVGTPGGTTSSIIGVGAFVSPEMMTAEYSLREKLPSNQYTWSSRGPTIDGALGVSISAPGGAIASVPNWTLRGSQLMNGTSMSSPNACGGIALVLSALKATGVPYTPYTVKTALENTAQKVEGVEVFAQGHGVLQVEKAFDHIRQHADSAERNVRFSVAVNGGRGVHLRQALSQRKPTEMTVSIEPVYAEDIEANEKISLSIHVSLVSEVPWVHVPPCLELMNTPRTFVIKVDPRGLREGAHYTEVLGYDISNPQKGPLFRVPVTVVRPESVQDKVQYKVTSEREVTFKPGQVHRRFIDVPLGATWAEVTIQSLSPETVGRFILHMVQLQPHSAYRTHESYKFFNLTELGEVSYTCPVLEGVTVEVCLARWWASLGEVNVNYNVTFHGLQPSVTTLNLHAADGITRVDVKSPLKHEDVQPSIKLEHGVCPLRPSEFKIRPLGDRDVLPPNRPSYELVLTYNYHQTKTCEVMPHCPTLSGLNLDTYNFKLEKGDYTIKLQIRHETKDLLEKLKDVTFLVQYKLPSALSLDVYPSKSNALLGKAKFGTQRCGIGVTAPMFITPLPDDKVPKAASPGHYLVGQISYAKAEPGKKTATYPVHYVISAAPCKPKNGGKDKDKKEDKDPQEEFNEALRDFKIQWMSKLDSKAIYQELKELHPNHLPLHVGLLQALDNDKERLKQLDDIIAAADVVIGQVDMAELASFLALKADTRSDAATIKVEMEKKKATLIDAVCKKGNAAADKVLQALDGDAVGSTEIVKDLALVKETFEELLKWAEPMDIKVVSFTMKHAMVCGQYGRAIKAAQKILDDKPNKENEKKCIELYKKIGWDHVAKHCERWLPVRYPQSYTLF

Target ORF information:

RefSeq Version	XM_002603268.1
Organism	Branchiostoma floridae(Florida lancelet)
Definition	Branchiostoma floridae hypothetical protein, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002603268.1

ORF Insert Sequence:

ATGGCTGCCA TCGTCGACCA CGAATTCCCG ATTCACGGCC TTCTACCGAA AAGAGAGACC 
GGCGCTTCGG CTTTCCTCGC CAAATATCCC GAGTATGACG GCAGGGGAGT CACCATTGCT 
ATCCTGGACA CAGGAGTGGA CCCAGGAGCG CCAGGCTTAC AGCAAACCTC AGATGGGAGG 
CCAAAGATCG TGGATATCAT CGACACCACG GGGAGCGGAG ATGTGGACGT GTCAACTGTC 
GTGGAGCCAA AAGATGGGGA GATTGTGGGA CTGTCGGGGC GAACCCTTAA GGTCCCAGCT 
AGTTGGGAGA ATCCAACCGG CCGTTACCAC ATAGGGGTGA AGAACATGTA TGAGCTCTTC 
CCTAAACAAC TCAGAGACAG GACTCAGAAA GACAAGAAAG AGAAGACCTG GGACCCTCCA 
CACAGGGTGG CTCTGGCTGA GGCAATCAGG AAACTGGATG AGTTTGATAC AGCACACCCC 
AACCCTACAG CACAGGATGA GAAGCTCCAG AGAGAAGACC TCCAGGCCCA ACTGGACATC 
CTGACCAGTC AGGAGAAGAA GTACTCGGAC CCTGGTCCTG TGTGCGACTG TCTGGTCTGG 
CACGATGGGA ACACATGGAG GGCTGTGTTA GACACCAGTG AGACAGGAGA CCTGGAGTCG 
TGTACAGTAC TGGCCAGCTA CAGAGAACAG CACCAGTTTT GTATCTTTAG TTTGTTTGTT 
ATGTTTAACT ACTCTGTCAA CATCTACGAC GATGGAAAGG TTCTCAACAT ATGTGCCAAT 
GGAGGAGCCC ACGGTACCCA CGTGGCGTGT ATAGCCGCGG GAAACTTCCC AGATGACCCG 
GAGAGGAACG GAATTGCGCC GGGAGCGCAG ATCGTTGCCA TCAAGATCGG AGACTCCCGG 
CTTAGTACCA TGGAGACTGG CTCTGCACTT ATAAGAGCGA TGATTGCTGT AATTGATCAG 
AAGTGCGATC TGGTGAACTT CAGTTATGGG GAAGCGGCAC ACTGGCCTGA CAAGGGTCGA 
GTGTGTGACA TCATCTCGGA AGCTGTCAAC AAACATGGCG TCATCTTCGT GTCCAGCGCC 
GGGAACAACG GCCCCGCCCT GACGAGTGTC GGAACTCCGG GCGGAACGAC CTCCAGTATC 
ATTGGTGTCG GTGCCTTCGT GTCTCCAGAG ATGATGACAG CTGAATACTC TCTCAGGGAA 
AAGTTACCTA GCAACCAATA CACCTGGTCG TCAAGGGGAC CAACTATAGA CGGAGCCTTA 
GGTGTGAGTA TTTCCGCGCC AGGTGGCGCT ATAGCCTCCG TGCCTAACTG GACGCTCCGC 
GGCTCACAGC TAATGAACGG GACGTCCATG TCTTCACCAA ACGCCTGCGG GGGCATCGCT 
CTTGTACTGT CTGCGCTGAA GGCGACGGGT GTACCCTACA CCCCCTACAC TGTGAAGACT 
GCACTAGAGA ACACAGCACA GAAGGTGGAA GGGGTGGAGG TGTTCGCTCA GGGACATGGG 
GTGCTACAGG TGGAGAAGGC TTTTGACCAC ATCCGTCAAC ATGCCGACTC AGCGGAGAGA 
AACGTGCGGT TCTCTGTAGC GGTGAACGGT GGGAGGGGGG TGCACCTCAG ACAGGCCTTG 
TCACAGAGGA AACCTACCGA GATGACTGTC AGTATAGAAC CTGTGTATGC TGAGGACATA 
GAGGCCAATG AGAAGATATC TCTCTCCATC CATGTGAGCC TGGTGAGTGA GGTTCCATGG 
GTACATGTGC CGCCATGTTT GGAACTCATG AACACCCCAA GGACGTTTGT CATCAAGGTC 
GACCCAAGGG GACTCAGGGA AGGAGCTCAC TATACTGAGG TTTTAGGCTA TGACATCAGT 
AACCCCCAGA AGGGCCCCCT GTTCAGAGTG CCTGTGACAG TAGTGCGACC AGAGAGTGTA 
CAAGACAAGG TCCAGTACAA GGTGACCTCT GAGAGAGAAG TGACCTTCAA ACCTGGACAG 
GTACACAGGA GGTTCATTGA CGTGCCTCTG GGAGCCACGT GGGCAGAGGT TACCATCCAA 
TCCCTGTCCC CAGAGACAGT GGGGAGGTTC ATTCTCCACA TGGTACAGCT ACAGCCACAC 
TCTGCCTACA GGACGCACGA GTCCTACAAG TTCTTCAACC TTACAGAGCT GGGGGAGGTC 
TCCTATACCT GCCCTGTGTT GGAGGGAGTG ACAGTAGAAG TGTGCCTAGC ACGTTGGTGG 
GCAAGTCTTG GGGAGGTCAA TGTCAACTAC AACGTCACCT TTCATGGGTT ACAGCCAAGT 
GTCACTACAC TCAATCTGCA TGCAGCGGAC GGTATCACCA GGGTGGACGT TAAGTCTCCA 
CTGAAGCACG AGGATGTCCA ACCAAGCATC AAACTGGAGC ATGGTGTATG TCCGCTCAGG 
CCGTCCGAGT TTAAGATCCG CCCCCTGGGT GACAGGGACG TACTGCCTCC CAACCGACCA 
TCGTATGAGC TGGTGCTGAC ATATAACTAC CATCAGACTA AGACTTGTGA GGTGATGCCC 
CACTGCCCGA CCCTATCTGG CTTAAATTTG GACACGTACA ACTTCAAACT TGAGAAGGGA 
GACTATACCA TTAAGCTACA GATAAGGCAT GAGACTAAGG ACCTCCTGGA GAAACTGAAG 
GACGTGACCT TCCTGGTGCA ATACAAACTG CCCAGCGCCC TGTCGTTGGA CGTCTACCCG 
TCCAAGTCCA ACGCTCTGCT GGGCAAGGCC AAGTTCGGGA CACAGCGATG TGGTATAGGG 
GTGACGGCAC CGATGTTCAT CACCCCTCTA CCTGACGACA AGGTCCCAAA GGCTGCTAGT 
CCAGGACACT ACCTGGTAGG GCAGATCTCT TACGCCAAGG CCGAGCCTGG CAAGAAAACT 
GCCACCTACC CAGTGCACTA CGTGATATCA GCTGCCCCCT GTAAGCCCAA GAACGGTGGG 
AAAGACAAGG ACAAGAAGGA AGACAAGGAC CCCCAGGAGG AGTTTAATGA GGCTCTCAGG 
GATTTCAAGA TACAGTGGAT GTCAAAGCTT GACAGCAAGG CCATCTATCA GGAGTTGAAG 
GAACTGCACC CCAACCACCT ACCCTTACAT GTAGGACTAC TGCAGGCTCT GGATAATGAC 
AAGGAGAGAT TGAAACAGCT GGATGACATC ATCGCGGCTG CAGACGTTGT GATTGGTCAG 
GTGGACATGG CCGAACTGGC GAGCTTTCTC GCCCTGAAGG CTGACACGCG ATCAGACGCA 
GCGACCATCA AAGTTGAGAT GGAAAAGAAG AAGGCAACCC TGATCGACGC TGTGTGCAAG 
AAGGGAAATG CAGCGGCTGA CAAGGTTCTG CAGGCACTGG ATGGAGACGC AGTGGGCAGC 
ACAGAAATAG TGAAGGACCT CGCACTTGTG AAGGAAACGT TTGAGGAGCT GCTGAAATGG 
GCAGAACCAA TGGACATCAA GGTGGTCAGT TTTACCATGA AACATGCCAT GGTGTGTGGT 
CAGTATGGCA GGGCCATCAA GGCAGCACAG AAGATCCTGG ATGACAAACC TAACAAGGAA 
AACGAGAAGA AGTGTATAGA GCTTTACAAG AAGATTGGTT GGGACCACGT GGCCAAACAC 
TGCGAGCGCT GGCTGCCCGT CAGATACCCA CAATCCTACA CACTTTTCTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The amphioxus genome and the evolution of the chordate karyotype.
Nature453(7198)1064-71(2008 Jun)
Putnam NH,Butts T,Ferrier DE,Furlong RF,Hellsten U,Kawashima T,Robinson-Rechavi M,Shoguchi E,Terry A,Yu JK,Benito-Gutiérrez EL,Dubchak I,Garcia-Fernàndez J,Gibson-Brown JJ,Grigoriev IV,Horton AC,de Jong PJ,Jurka J,Kapitonov VV,Kohara Y,Kuroki Y,Lindquist E,Lucas S,Osoegawa K,Pennacchio LA,Salamov AA,Satou Y,Sauka-Spengler T,Schmutz J,Shin-I T,Toyoda A,Bronner-Fraser M,Fujiyama A,Holland LZ,Holland PW,Satoh N,Rokhsar DS

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BRAFLDRAFT_119698 cDNA ORF clone, Branchiostoma floridae(Florida lancelet)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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